Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A2171:A2177
Extra
PDB:
ATOM 1 O3' U A2170 126.789 -58.306 -18.461 1.00 46.13 O
ATOM 2 P A A2171 126.351 -59.758 -18.943 1.00 44.14 P
ATOM 3 OP1 A A2171 124.916 -59.651 -19.317 1.00 51.20 O
ATOM 4 OP2 A A2171 126.755 -60.685 -17.870 1.00 40.44 O
ATOM 5 O5' A A2171 127.242 -60.027 -20.239 1.00 42.06 O
ATOM 6 C5' A A2171 127.615 -61.355 -20.619 1.00 47.23 C
ATOM 7 C4' A A2171 127.725 -61.444 -22.118 1.00 50.57 C
ATOM 8 O4' A A2171 126.452 -61.016 -22.620 1.00 55.01 O
ATOM 9 C3' A A2171 128.777 -60.531 -22.743 1.00 51.35 C
ATOM 10 O3' A A2171 129.792 -61.369 -23.273 1.00 46.30 O
ATOM 11 C2' A A2171 128.106 -59.942 -23.987 1.00 59.38 C
ATOM 12 O2' A A2171 128.656 -60.385 -25.222 1.00 63.00 O
ATOM 13 C1' A A2171 126.632 -60.321 -23.828 1.00 57.47 C
ATOM 14 N9 A A2171 125.692 -59.199 -23.869 1.00 54.31 N
ATOM 15 C8 A A2171 125.138 -58.503 -22.828 1.00 56.39 C
ATOM 16 N7 A A2171 124.273 -57.596 -23.206 1.00 59.30 N
ATOM 17 C5 A A2171 124.270 -57.694 -24.589 1.00 57.06 C
ATOM 18 C6 A A2171 123.545 -57.021 -25.586 1.00 61.84 C
ATOM 19 N6 A A2171 122.608 -56.101 -25.346 1.00 66.14 N
ATOM 20 N1 A A2171 123.803 -57.343 -26.866 1.00 62.77 N
ATOM 21 C2 A A2171 124.708 -58.282 -27.116 1.00 63.28 C
ATOM 22 N3 A A2171 125.432 -58.997 -26.270 1.00 55.60 N
ATOM 23 C4 A A2171 125.159 -58.655 -25.009 1.00 51.85 C
ATOM 24 P A A2172 131.249 -61.411 -22.610 1.00 56.62 P
ATOM 25 OP1 A A2172 131.401 -60.456 -21.472 1.00 48.54 O
ATOM 26 OP2 A A2172 132.198 -61.339 -23.750 1.00 52.30 O
ATOM 27 O5' A A2172 131.275 -62.876 -21.991 1.00 47.37 O
TER
ATOM 1 O3' G B2176 122.828 -59.790 -32.499 1.00 44.74 O
ATOM 2 P U B2177 122.616 -58.686 -31.360 1.00 43.19 P
ATOM 3 OP1 U B2177 121.629 -57.674 -31.826 1.00 34.94 O
ATOM 4 OP2 U B2177 123.979 -58.266 -30.952 1.00 48.80 O
ATOM 5 O5' U B2177 121.991 -59.477 -30.119 1.00 52.56 O
ATOM 6 C5' U B2177 120.600 -59.817 -30.090 1.00 50.99 C
ATOM 7 C4' U B2177 120.271 -60.632 -28.856 1.00 45.84 C
ATOM 8 O4' U B2177 121.136 -61.797 -28.827 1.00 50.42 O
ATOM 9 C3' U B2177 120.511 -59.952 -27.514 1.00 44.98 C
ATOM 10 O3' U B2177 119.367 -59.293 -27.016 1.00 41.93 O
ATOM 11 C2' U B2177 120.734 -61.134 -26.586 1.00 52.55 C
ATOM 12 O2' U B2177 119.534 -61.762 -26.179 1.00 51.39 O
ATOM 13 C1' U B2177 121.489 -62.098 -27.492 1.00 51.55 C
ATOM 14 N1 U B2177 122.937 -61.920 -27.322 1.00 51.81 N
ATOM 15 C2 U B2177 123.492 -62.235 -26.088 1.00 52.96 C
ATOM 16 O2 U B2177 122.828 -62.615 -25.135 1.00 49.91 O
ATOM 17 N3 U B2177 124.850 -62.076 -26.004 1.00 56.30 N
ATOM 18 C4 U B2177 125.689 -61.637 -26.999 1.00 60.50 C
ATOM 19 O4 U B2177 126.905 -61.588 -26.792 1.00 62.00 O
ATOM 20 C5 U B2177 125.031 -61.307 -28.230 1.00 57.73 C
ATOM 21 C6 U B2177 123.714 -61.461 -28.343 1.00 55.16 C
ATOM 22 P A B2178 118.800 -57.984 -27.740 1.00 46.96 P
ATOM 23 OP1 A B2178 118.336 -58.412 -29.093 1.00 46.96 O
ATOM 24 OP2 A B2178 119.741 -56.838 -27.608 1.00 43.72 O
ATOM 25 O5' A B2178 117.530 -57.655 -26.841 1.00 41.37 O
TER
ATOM 2 P A A2171 126.351 -59.758 -18.943 1.00 44.14 P
ATOM 3 OP1 A A2171 124.916 -59.651 -19.317 1.00 51.20 O
ATOM 4 OP2 A A2171 126.755 -60.685 -17.870 1.00 40.44 O
ATOM 5 O5' A A2171 127.242 -60.027 -20.239 1.00 42.06 O
ATOM 6 C5' A A2171 127.615 -61.355 -20.619 1.00 47.23 C
ATOM 7 C4' A A2171 127.725 -61.444 -22.118 1.00 50.57 C
ATOM 8 O4' A A2171 126.452 -61.016 -22.620 1.00 55.01 O
ATOM 9 C3' A A2171 128.777 -60.531 -22.743 1.00 51.35 C
ATOM 10 O3' A A2171 129.792 -61.369 -23.273 1.00 46.30 O
ATOM 11 C2' A A2171 128.106 -59.942 -23.987 1.00 59.38 C
ATOM 12 O2' A A2171 128.656 -60.385 -25.222 1.00 63.00 O
ATOM 13 C1' A A2171 126.632 -60.321 -23.828 1.00 57.47 C
ATOM 14 N9 A A2171 125.692 -59.199 -23.869 1.00 54.31 N
ATOM 15 C8 A A2171 125.138 -58.503 -22.828 1.00 56.39 C
ATOM 16 N7 A A2171 124.273 -57.596 -23.206 1.00 59.30 N
ATOM 17 C5 A A2171 124.270 -57.694 -24.589 1.00 57.06 C
ATOM 18 C6 A A2171 123.545 -57.021 -25.586 1.00 61.84 C
ATOM 19 N6 A A2171 122.608 -56.101 -25.346 1.00 66.14 N
ATOM 20 N1 A A2171 123.803 -57.343 -26.866 1.00 62.77 N
ATOM 21 C2 A A2171 124.708 -58.282 -27.116 1.00 63.28 C
ATOM 22 N3 A A2171 125.432 -58.997 -26.270 1.00 55.60 N
ATOM 23 C4 A A2171 125.159 -58.655 -25.009 1.00 51.85 C
ATOM 24 P A A2172 131.249 -61.411 -22.610 1.00 56.62 P
ATOM 25 OP1 A A2172 131.401 -60.456 -21.472 1.00 48.54 O
ATOM 26 OP2 A A2172 132.198 -61.339 -23.750 1.00 52.30 O
ATOM 27 O5' A A2172 131.275 -62.876 -21.991 1.00 47.37 O
TER
ATOM 1 O3' G B2176 122.828 -59.790 -32.499 1.00 44.74 O
ATOM 2 P U B2177 122.616 -58.686 -31.360 1.00 43.19 P
ATOM 3 OP1 U B2177 121.629 -57.674 -31.826 1.00 34.94 O
ATOM 4 OP2 U B2177 123.979 -58.266 -30.952 1.00 48.80 O
ATOM 5 O5' U B2177 121.991 -59.477 -30.119 1.00 52.56 O
ATOM 6 C5' U B2177 120.600 -59.817 -30.090 1.00 50.99 C
ATOM 7 C4' U B2177 120.271 -60.632 -28.856 1.00 45.84 C
ATOM 8 O4' U B2177 121.136 -61.797 -28.827 1.00 50.42 O
ATOM 9 C3' U B2177 120.511 -59.952 -27.514 1.00 44.98 C
ATOM 10 O3' U B2177 119.367 -59.293 -27.016 1.00 41.93 O
ATOM 11 C2' U B2177 120.734 -61.134 -26.586 1.00 52.55 C
ATOM 12 O2' U B2177 119.534 -61.762 -26.179 1.00 51.39 O
ATOM 13 C1' U B2177 121.489 -62.098 -27.492 1.00 51.55 C
ATOM 14 N1 U B2177 122.937 -61.920 -27.322 1.00 51.81 N
ATOM 15 C2 U B2177 123.492 -62.235 -26.088 1.00 52.96 C
ATOM 16 O2 U B2177 122.828 -62.615 -25.135 1.00 49.91 O
ATOM 17 N3 U B2177 124.850 -62.076 -26.004 1.00 56.30 N
ATOM 18 C4 U B2177 125.689 -61.637 -26.999 1.00 60.50 C
ATOM 19 O4 U B2177 126.905 -61.588 -26.792 1.00 62.00 O
ATOM 20 C5 U B2177 125.031 -61.307 -28.230 1.00 57.73 C
ATOM 21 C6 U B2177 123.714 -61.461 -28.343 1.00 55.16 C
ATOM 22 P A B2178 118.800 -57.984 -27.740 1.00 46.96 P
ATOM 23 OP1 A B2178 118.336 -58.412 -29.093 1.00 46.96 O
ATOM 24 OP2 A B2178 119.741 -56.838 -27.608 1.00 43.72 O
ATOM 25 O5' A B2178 117.530 -57.655 -26.841 1.00 41.37 O
TER
Atoms:
OP1: (124.916,-59.651,-19.317)
OP2: (126.755,-60.685,-17.870)
C3': (128.777,-60.531,-22.743)
C1': (126.632,-60.321,-23.828)
C5': (127.615,-61.355,-20.619)
O4': (126.452,-61.016,-22.620)
C8: (125.138,-58.503,-22.828)
O2': (128.656,-60.385,-25.222)
C6: (123.545,-57.021,-25.586)
C5: (124.270,-57.694,-24.589)
C4: (125.159,-58.655,-25.009)
P: (126.351,-59.758,-18.943)
C4': (127.725,-61.444,-22.118)
C2': (128.106,-59.942,-23.987)
C2: (124.708,-58.282,-27.116)
N1: (123.803,-57.343,-26.866)
N3: (125.432,-58.997,-26.270)
N6: (122.608,-56.101,-25.346)
N7: (124.273,-57.596,-23.206)
N9: (125.692,-59.199,-23.869)
O5': (127.242,-60.027,-20.239)
O3': (129.792,-61.369,-23.273)
OP2: (126.755,-60.685,-17.870)
C3': (128.777,-60.531,-22.743)
C1': (126.632,-60.321,-23.828)
C5': (127.615,-61.355,-20.619)
O4': (126.452,-61.016,-22.620)
C8: (125.138,-58.503,-22.828)
O2': (128.656,-60.385,-25.222)
C6: (123.545,-57.021,-25.586)
C5: (124.270,-57.694,-24.589)
C4: (125.159,-58.655,-25.009)
P: (126.351,-59.758,-18.943)
C4': (127.725,-61.444,-22.118)
C2': (128.106,-59.942,-23.987)
C2: (124.708,-58.282,-27.116)
N1: (123.803,-57.343,-26.866)
N3: (125.432,-58.997,-26.270)
N6: (122.608,-56.101,-25.346)
N7: (124.273,-57.596,-23.206)
N9: (125.692,-59.199,-23.869)
O5': (127.242,-60.027,-20.239)
O3': (129.792,-61.369,-23.273)
C4: (125.689,-61.637,-26.999)
N3: (124.850,-62.076,-26.004)
OP1: (121.629,-57.674,-31.826)
OP2: (123.979,-58.266,-30.952)
C2: (123.492,-62.235,-26.088)
C1': (121.489,-62.098,-27.492)
C3': (120.511,-59.952,-27.514)
O5': (121.991,-59.477,-30.119)
O4': (121.136,-61.797,-28.827)
C5': (120.600,-59.817,-30.090)
P: (122.616,-58.686,-31.360)
C4': (120.271,-60.632,-28.856)
C2': (120.734,-61.134,-26.586)
O2': (119.534,-61.762,-26.179)
N1: (122.937,-61.920,-27.322)
O4: (126.905,-61.588,-26.792)
O2: (122.828,-62.615,-25.135)
C6: (123.714,-61.461,-28.343)
C5: (125.031,-61.307,-28.230)
O3': (119.367,-59.293,-27.016)
N3: (124.850,-62.076,-26.004)
OP1: (121.629,-57.674,-31.826)
OP2: (123.979,-58.266,-30.952)
C2: (123.492,-62.235,-26.088)
C1': (121.489,-62.098,-27.492)
C3': (120.511,-59.952,-27.514)
O5': (121.991,-59.477,-30.119)
O4': (121.136,-61.797,-28.827)
C5': (120.600,-59.817,-30.090)
P: (122.616,-58.686,-31.360)
C4': (120.271,-60.632,-28.856)
C2': (120.734,-61.134,-26.586)
O2': (119.534,-61.762,-26.179)
N1: (122.937,-61.920,-27.322)
O4: (126.905,-61.588,-26.792)
O2: (122.828,-62.615,-25.135)
C6: (123.714,-61.461,-28.343)
C5: (125.031,-61.307,-28.230)
O3': (119.367,-59.293,-27.016)
Image (generated by PyMOL):