ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A1617:A1909

Extra

PDB:
ATOM 1 O3' C A1616 61.260 -42.314 10.451 1.00 35.08 O
ATOM 2 P A A1617 59.764 -41.829 10.895 1.00 38.15 P
ATOM 3 OP1 A A1617 59.072 -41.325 9.678 1.00 41.85 O
ATOM 4 OP2 A A1617 59.915 -40.903 12.056 1.00 38.13 O
ATOM 5 O5' A A1617 59.090 -43.178 11.367 1.00 29.37 O
ATOM 6 C5' A A1617 59.579 -44.440 10.943 1.00 27.58 C
ATOM 7 C4' A A1617 59.352 -45.480 12.008 1.00 32.02 C
ATOM 8 O4' A A1617 60.474 -45.477 12.919 1.00 29.44 O
ATOM 9 C3' A A1617 58.152 -45.234 12.911 1.00 34.04 C
ATOM 10 O3' A A1617 56.918 -45.686 12.364 1.00 33.40 O
ATOM 11 C2' A A1617 58.540 -45.951 14.171 1.00 27.98 C
ATOM 12 O2' A A1617 58.374 -47.332 13.992 1.00 39.43 O
ATOM 13 C1' A A1617 60.030 -45.660 14.235 1.00 28.11 C
ATOM 14 N9 A A1617 60.328 -44.435 15.000 1.00 26.07 N
ATOM 15 C8 A A1617 60.512 -43.167 14.518 1.00 29.85 C
ATOM 16 N7 A A1617 60.751 -42.280 15.455 1.00 31.84 N
ATOM 17 C5 A A1617 60.739 -43.019 16.628 1.00 24.39 C
ATOM 18 C6 A A1617 60.932 -42.687 17.966 1.00 27.04 C
ATOM 19 N6 A A1617 61.198 -41.470 18.421 1.00 32.37 N
ATOM 20 N1 A A1617 60.845 -43.674 18.865 1.00 33.56 N
ATOM 21 C2 A A1617 60.574 -44.912 18.468 1.00 34.19 C
ATOM 22 N3 A A1617 60.380 -45.338 17.234 1.00 34.49 N
ATOM 23 C4 A A1617 60.483 -44.338 16.358 1.00 24.43 C
ATOM 24 P A A1618 55.570 -44.823 12.616 1.00 48.98 P
ATOM 25 OP1 A A1618 54.455 -45.472 11.869 1.00 44.15 O
ATOM 26 OP2 A A1618 55.895 -43.390 12.311 1.00 35.62 O
ATOM 27 O5' A A1618 55.336 -45.014 14.170 1.00 29.24 O
TER

ATOM 1 O3' G B1908 58.775 -48.011 21.443 1.00 37.55 O
ATOM 2 P U B1909 59.783 -48.835 20.486 1.00 41.31 P
ATOM 3 OP1 U B1909 59.104 -48.959 19.173 1.00 43.04 O
ATOM 4 OP2 U B1909 60.175 -50.074 21.212 1.00 55.54 O
ATOM 5 O5' U B1909 61.046 -47.901 20.300 1.00 34.19 O
ATOM 6 C5' U B1909 61.850 -48.069 19.137 1.00 33.16 C
ATOM 7 C4' U B1909 63.241 -47.517 19.299 1.00 32.65 C
ATOM 8 O4' U B1909 63.180 -46.131 19.722 1.00 41.71 O
ATOM 9 C3' U B1909 64.132 -48.169 20.338 1.00 31.30 C
ATOM 10 O3' U B1909 64.681 -49.420 19.911 1.00 34.62 O
ATOM 11 C2' U B1909 65.180 -47.073 20.570 1.00 33.27 C
ATOM 12 O2' U B1909 66.110 -47.020 19.499 1.00 32.81 O
ATOM 13 C1' U B1909 64.316 -45.819 20.500 1.00 35.63 C
ATOM 14 N1 U B1909 63.871 -45.396 21.819 1.00 35.10 N
ATOM 15 C2 U B1909 64.874 -44.952 22.615 1.00 36.88 C
ATOM 16 O2 U B1909 66.027 -44.915 22.208 1.00 36.71 O
ATOM 17 N3 U B1909 64.468 -44.578 23.868 1.00 37.30 N
ATOM 18 C4 U B1909 63.190 -44.604 24.358 1.00 36.52 C
ATOM 19 O4 U B1909 62.990 -44.216 25.504 1.00 41.26 O
ATOM 20 C5 U B1909 62.211 -45.091 23.445 1.00 35.04 C
ATOM 21 C6 U B1909 62.576 -45.464 22.228 1.00 34.60 C
ATOM 22 P C B1910 64.865 -50.641 20.970 1.00 41.42 P
ATOM 23 OP1 C B1910 65.511 -51.763 20.264 1.00 29.02 O
ATOM 24 OP2 C B1910 63.538 -50.881 21.598 1.00 46.91 O
ATOM 25 O5' C B1910 65.866 -50.035 22.050 1.00 28.01 O
TER

Atoms:
OP1: (59.072,-41.325,9.678)
OP2: (59.915,-40.903,12.056)
C3': (58.152,-45.234,12.911)
C1': (60.030,-45.660,14.235)
C5': (59.579,-44.440,10.943)
O4': (60.474,-45.477,12.919)
C8: (60.512,-43.167,14.518)
O2': (58.374,-47.332,13.992)
C6: (60.932,-42.687,17.966)
C5: (60.739,-43.019,16.628)
C4: (60.483,-44.338,16.358)
P: (59.764,-41.829,10.895)
C4': (59.352,-45.480,12.008)
C2': (58.540,-45.951,14.171)
C2: (60.574,-44.912,18.468)
N1: (60.845,-43.674,18.865)
N3: (60.380,-45.338,17.234)
N6: (61.198,-41.470,18.421)
N7: (60.751,-42.280,15.455)
N9: (60.328,-44.435,15.000)
O5': (59.090,-43.178,11.367)
O3': (56.918,-45.686,12.364)
C4: (63.190,-44.604,24.358)
N3: (64.468,-44.578,23.868)
OP1: (59.104,-48.959,19.173)
OP2: (60.175,-50.074,21.212)
C2: (64.874,-44.952,22.615)
C1': (64.316,-45.819,20.500)
C3': (64.132,-48.169,20.338)
O5': (61.046,-47.901,20.300)
O4': (63.180,-46.131,19.722)
C5': (61.850,-48.069,19.137)
P: (59.783,-48.835,20.486)
C4': (63.241,-47.517,19.299)
C2': (65.180,-47.073,20.570)
O2': (66.110,-47.020,19.499)
N1: (63.871,-45.396,21.819)
O4: (62.990,-44.216,25.504)
O2: (66.027,-44.915,22.208)
C6: (62.576,-45.464,22.228)
C5: (62.211,-45.091,23.445)
O3': (64.681,-49.420,19.911)
Image (generated by PyMOL):
PyMOL image
show in jmol