Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A2544:A2519
Extra
PDB:
ATOM 1 O3' A A2543 41.048 -59.587 18.067 1.00 28.55 O
ATOM 2 P A A2544 40.099 -59.212 19.288 1.00 25.75 P
ATOM 3 OP1 A A2544 40.084 -60.401 20.182 1.00 41.17 O
ATOM 4 OP2 A A2544 38.806 -58.727 18.721 1.00 50.96 O
ATOM 5 O5' A A2544 40.864 -58.006 19.980 1.00 29.80 O
ATOM 6 C5' A A2544 40.269 -56.723 20.067 1.00 32.28 C
ATOM 7 C4' A A2544 39.231 -56.666 21.153 1.00 33.61 C
ATOM 8 O4' A A2544 39.842 -57.068 22.406 1.00 39.11 O
ATOM 9 C3' A A2544 38.643 -55.289 21.392 1.00 36.71 C
ATOM 10 O3' A A2544 37.304 -55.396 21.863 1.00 38.45 O
ATOM 11 C2' A A2544 39.508 -54.739 22.507 1.00 37.37 C
ATOM 12 O2' A A2544 38.868 -53.787 23.316 1.00 42.97 O
ATOM 13 C1' A A2544 39.874 -55.981 23.307 1.00 35.77 C
ATOM 14 N9 A A2544 41.220 -55.893 23.852 1.00 45.42 N
ATOM 15 C8 A A2544 42.313 -55.260 23.252 1.00 57.69 C
ATOM 16 N7 A A2544 43.459 -55.265 23.906 1.00 39.13 N
ATOM 17 C5 A A2544 43.044 -55.948 25.032 1.00 46.49 C
ATOM 18 C6 A A2544 43.804 -56.288 26.139 1.00 52.07 C
ATOM 19 N6 A A2544 45.103 -55.945 26.209 1.00 40.84 N
ATOM 20 N1 A A2544 43.136 -56.969 27.122 1.00 61.50 N
ATOM 21 C2 A A2544 41.813 -57.266 26.936 1.00 62.27 C
ATOM 22 N3 A A2544 40.973 -57.011 25.906 1.00 35.35 N
ATOM 23 C4 A A2544 41.684 -56.334 25.018 1.00 39.52 C
ATOM 24 P G A2545 36.056 -55.058 20.904 1.00 38.68 P
ATOM 25 OP1 G A2545 34.967 -54.619 21.788 1.00 46.21 O
ATOM 26 OP2 G A2545 35.839 -56.248 20.027 1.00 45.83 O
ATOM 27 O5' G A2545 36.560 -53.838 20.005 1.00 37.15 O
TER
ATOM 1 O3' U B2518 44.240 -61.453 29.780 1.00 47.20 O
ATOM 2 P U B2519 42.736 -60.915 29.733 1.00 34.45 P
ATOM 3 OP1 U B2519 42.770 -59.509 30.162 1.00 34.58 O
ATOM 4 OP2 U B2519 41.908 -61.873 30.501 1.00 38.21 O
ATOM 5 O5' U B2519 42.397 -61.015 28.163 1.00 42.54 O
ATOM 6 C5' U B2519 41.042 -61.020 27.696 1.00 54.27 C
ATOM 7 C4' U B2519 40.885 -61.584 26.283 1.00 45.28 C
ATOM 8 O4' U B2519 41.160 -60.543 25.324 1.00 34.73 O
ATOM 9 C3' U B2519 41.778 -62.760 25.927 1.00 61.43 C
ATOM 10 O3' U B2519 41.038 -64.003 25.876 1.00 53.49 O
ATOM 11 C2' U B2519 42.366 -62.425 24.545 1.00 51.62 C
ATOM 12 O2' U B2519 42.012 -63.336 23.528 1.00 57.37 O
ATOM 13 C1' U B2519 41.851 -61.037 24.215 1.00 36.51 C
ATOM 14 N1 U B2519 42.930 -60.087 23.903 1.00 44.23 N
ATOM 15 C2 U B2519 42.850 -59.470 22.669 1.00 49.74 C
ATOM 16 O2 U B2519 41.941 -59.695 21.894 1.00 62.80 O
ATOM 17 N3 U B2519 43.826 -58.577 22.342 1.00 32.78 N
ATOM 18 C4 U B2519 44.867 -58.257 23.138 1.00 42.29 C
ATOM 19 O4 U B2519 45.636 -57.433 22.664 1.00 45.60 O
ATOM 20 C5 U B2519 44.908 -58.941 24.412 1.00 40.57 C
ATOM 21 C6 U B2519 43.963 -59.825 24.759 1.00 33.02 C
ATOM 22 P C B2520 39.559 -64.086 25.285 1.00 39.87 P
ATOM 23 OP1 C B2520 39.500 -65.298 24.455 1.00 72.61 O
ATOM 24 OP2 C B2520 39.270 -62.793 24.662 1.00 66.96 O
ATOM 25 O5' C B2520 38.668 -64.282 26.578 1.00 35.39 O
TER
ATOM 2 P A A2544 40.099 -59.212 19.288 1.00 25.75 P
ATOM 3 OP1 A A2544 40.084 -60.401 20.182 1.00 41.17 O
ATOM 4 OP2 A A2544 38.806 -58.727 18.721 1.00 50.96 O
ATOM 5 O5' A A2544 40.864 -58.006 19.980 1.00 29.80 O
ATOM 6 C5' A A2544 40.269 -56.723 20.067 1.00 32.28 C
ATOM 7 C4' A A2544 39.231 -56.666 21.153 1.00 33.61 C
ATOM 8 O4' A A2544 39.842 -57.068 22.406 1.00 39.11 O
ATOM 9 C3' A A2544 38.643 -55.289 21.392 1.00 36.71 C
ATOM 10 O3' A A2544 37.304 -55.396 21.863 1.00 38.45 O
ATOM 11 C2' A A2544 39.508 -54.739 22.507 1.00 37.37 C
ATOM 12 O2' A A2544 38.868 -53.787 23.316 1.00 42.97 O
ATOM 13 C1' A A2544 39.874 -55.981 23.307 1.00 35.77 C
ATOM 14 N9 A A2544 41.220 -55.893 23.852 1.00 45.42 N
ATOM 15 C8 A A2544 42.313 -55.260 23.252 1.00 57.69 C
ATOM 16 N7 A A2544 43.459 -55.265 23.906 1.00 39.13 N
ATOM 17 C5 A A2544 43.044 -55.948 25.032 1.00 46.49 C
ATOM 18 C6 A A2544 43.804 -56.288 26.139 1.00 52.07 C
ATOM 19 N6 A A2544 45.103 -55.945 26.209 1.00 40.84 N
ATOM 20 N1 A A2544 43.136 -56.969 27.122 1.00 61.50 N
ATOM 21 C2 A A2544 41.813 -57.266 26.936 1.00 62.27 C
ATOM 22 N3 A A2544 40.973 -57.011 25.906 1.00 35.35 N
ATOM 23 C4 A A2544 41.684 -56.334 25.018 1.00 39.52 C
ATOM 24 P G A2545 36.056 -55.058 20.904 1.00 38.68 P
ATOM 25 OP1 G A2545 34.967 -54.619 21.788 1.00 46.21 O
ATOM 26 OP2 G A2545 35.839 -56.248 20.027 1.00 45.83 O
ATOM 27 O5' G A2545 36.560 -53.838 20.005 1.00 37.15 O
TER
ATOM 1 O3' U B2518 44.240 -61.453 29.780 1.00 47.20 O
ATOM 2 P U B2519 42.736 -60.915 29.733 1.00 34.45 P
ATOM 3 OP1 U B2519 42.770 -59.509 30.162 1.00 34.58 O
ATOM 4 OP2 U B2519 41.908 -61.873 30.501 1.00 38.21 O
ATOM 5 O5' U B2519 42.397 -61.015 28.163 1.00 42.54 O
ATOM 6 C5' U B2519 41.042 -61.020 27.696 1.00 54.27 C
ATOM 7 C4' U B2519 40.885 -61.584 26.283 1.00 45.28 C
ATOM 8 O4' U B2519 41.160 -60.543 25.324 1.00 34.73 O
ATOM 9 C3' U B2519 41.778 -62.760 25.927 1.00 61.43 C
ATOM 10 O3' U B2519 41.038 -64.003 25.876 1.00 53.49 O
ATOM 11 C2' U B2519 42.366 -62.425 24.545 1.00 51.62 C
ATOM 12 O2' U B2519 42.012 -63.336 23.528 1.00 57.37 O
ATOM 13 C1' U B2519 41.851 -61.037 24.215 1.00 36.51 C
ATOM 14 N1 U B2519 42.930 -60.087 23.903 1.00 44.23 N
ATOM 15 C2 U B2519 42.850 -59.470 22.669 1.00 49.74 C
ATOM 16 O2 U B2519 41.941 -59.695 21.894 1.00 62.80 O
ATOM 17 N3 U B2519 43.826 -58.577 22.342 1.00 32.78 N
ATOM 18 C4 U B2519 44.867 -58.257 23.138 1.00 42.29 C
ATOM 19 O4 U B2519 45.636 -57.433 22.664 1.00 45.60 O
ATOM 20 C5 U B2519 44.908 -58.941 24.412 1.00 40.57 C
ATOM 21 C6 U B2519 43.963 -59.825 24.759 1.00 33.02 C
ATOM 22 P C B2520 39.559 -64.086 25.285 1.00 39.87 P
ATOM 23 OP1 C B2520 39.500 -65.298 24.455 1.00 72.61 O
ATOM 24 OP2 C B2520 39.270 -62.793 24.662 1.00 66.96 O
ATOM 25 O5' C B2520 38.668 -64.282 26.578 1.00 35.39 O
TER
Atoms:
OP1: (40.084,-60.401,20.182)
OP2: (38.806,-58.727,18.721)
C3': (38.643,-55.289,21.392)
C1': (39.874,-55.981,23.307)
C5': (40.269,-56.723,20.067)
O4': (39.842,-57.068,22.406)
C8: (42.313,-55.260,23.252)
O2': (38.868,-53.787,23.316)
C6: (43.804,-56.288,26.139)
C5: (43.044,-55.948,25.032)
C4: (41.684,-56.334,25.018)
P: (40.099,-59.212,19.288)
C4': (39.231,-56.666,21.153)
C2': (39.508,-54.739,22.507)
C2: (41.813,-57.266,26.936)
N1: (43.136,-56.969,27.122)
N3: (40.973,-57.011,25.906)
N6: (45.103,-55.945,26.209)
N7: (43.459,-55.265,23.906)
N9: (41.220,-55.893,23.852)
O5': (40.864,-58.006,19.980)
O3': (37.304,-55.396,21.863)
OP2: (38.806,-58.727,18.721)
C3': (38.643,-55.289,21.392)
C1': (39.874,-55.981,23.307)
C5': (40.269,-56.723,20.067)
O4': (39.842,-57.068,22.406)
C8: (42.313,-55.260,23.252)
O2': (38.868,-53.787,23.316)
C6: (43.804,-56.288,26.139)
C5: (43.044,-55.948,25.032)
C4: (41.684,-56.334,25.018)
P: (40.099,-59.212,19.288)
C4': (39.231,-56.666,21.153)
C2': (39.508,-54.739,22.507)
C2: (41.813,-57.266,26.936)
N1: (43.136,-56.969,27.122)
N3: (40.973,-57.011,25.906)
N6: (45.103,-55.945,26.209)
N7: (43.459,-55.265,23.906)
N9: (41.220,-55.893,23.852)
O5': (40.864,-58.006,19.980)
O3': (37.304,-55.396,21.863)
C4: (44.867,-58.257,23.138)
N3: (43.826,-58.577,22.342)
OP1: (42.770,-59.509,30.162)
OP2: (41.908,-61.873,30.501)
C2: (42.850,-59.470,22.669)
C1': (41.851,-61.037,24.215)
C3': (41.778,-62.760,25.927)
O5': (42.397,-61.015,28.163)
O4': (41.160,-60.543,25.324)
C5': (41.042,-61.020,27.696)
P: (42.736,-60.915,29.733)
C4': (40.885,-61.584,26.283)
C2': (42.366,-62.425,24.545)
O2': (42.012,-63.336,23.528)
N1: (42.930,-60.087,23.903)
O4: (45.636,-57.433,22.664)
O2: (41.941,-59.695,21.894)
C6: (43.963,-59.825,24.759)
C5: (44.908,-58.941,24.412)
O3': (41.038,-64.003,25.876)
N3: (43.826,-58.577,22.342)
OP1: (42.770,-59.509,30.162)
OP2: (41.908,-61.873,30.501)
C2: (42.850,-59.470,22.669)
C1': (41.851,-61.037,24.215)
C3': (41.778,-62.760,25.927)
O5': (42.397,-61.015,28.163)
O4': (41.160,-60.543,25.324)
C5': (41.042,-61.020,27.696)
P: (42.736,-60.915,29.733)
C4': (40.885,-61.584,26.283)
C2': (42.366,-62.425,24.545)
O2': (42.012,-63.336,23.528)
N1: (42.930,-60.087,23.903)
O4: (45.636,-57.433,22.664)
O2: (41.941,-59.695,21.894)
C6: (43.963,-59.825,24.759)
C5: (44.908,-58.941,24.412)
O3': (41.038,-64.003,25.876)
Image (generated by PyMOL):