ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8S:A195:A827

Extra

PDB:
ATOM 1 O3' A A 194 -88.995 -55.992 41.723 1.00 0.01 O
ATOM 2 P A A 195 -90.079 -55.344 40.780 1.00 0.01 P
ATOM 3 OP1 A A 195 -90.268 -53.951 41.204 1.00 0.01 O
ATOM 4 OP2 A A 195 -91.217 -56.252 40.777 1.00 0.01 O
ATOM 5 O5' A A 195 -89.384 -55.356 39.375 1.00 0.01 O
ATOM 6 C5' A A 195 -89.573 -56.435 38.480 1.00 0.01 C
ATOM 7 C4' A A 195 -88.267 -56.962 38.014 1.00 0.01 C
ATOM 8 O4' A A 195 -88.420 -58.353 37.682 1.00 0.01 O
ATOM 9 C3' A A 195 -87.697 -56.270 36.786 1.00 0.01 C
ATOM 10 O3' A A 195 -86.372 -55.796 37.041 1.00 0.01 O
ATOM 11 C2' A A 195 -87.651 -57.375 35.739 1.00 0.01 C
ATOM 12 O2' A A 195 -86.514 -57.319 34.911 1.00 0.01 O
ATOM 13 C1' A A 195 -87.648 -58.637 36.579 1.00 0.01 C
ATOM 14 N9 A A 195 -88.205 -59.799 35.899 1.00 0.01 N
ATOM 15 C8 A A 195 -87.715 -61.074 35.895 1.00 0.01 C
ATOM 16 N7 A A 195 -88.375 -61.922 35.152 1.00 0.01 N
ATOM 17 C5 A A 195 -89.364 -61.139 34.626 1.00 0.01 C
ATOM 18 C6 A A 195 -90.392 -61.456 33.778 1.00 0.01 C
ATOM 19 N6 A A 195 -90.577 -62.670 33.289 1.00 0.01 N
ATOM 20 N1 A A 195 -91.224 -60.479 33.445 1.00 0.01 N
ATOM 21 C2 A A 195 -91.024 -59.266 33.946 1.00 0.01 C
ATOM 22 N3 A A 195 -90.086 -58.837 34.759 1.00 0.01 N
ATOM 23 C4 A A 195 -89.276 -59.841 35.062 1.00 0.01 C
ATOM 24 P A A 196 -86.127 -54.300 37.539 1.00 0.01 P
ATOM 25 OP1 A A 196 -84.749 -54.199 37.916 1.00 0.01 O
ATOM 26 OP2 A A 196 -87.126 -54.007 38.522 1.00 0.01 O
ATOM 27 O5' A A 196 -86.402 -53.435 36.261 1.00 0.01 O
TER

ATOM 1 O3' U B 826 -92.040 -54.958 30.354 1.00 0.01 O
ATOM 2 P U B 827 -92.120 -56.435 30.927 1.00 0.01 P
ATOM 3 OP1 U B 827 -92.451 -56.333 32.338 1.00 0.01 O
ATOM 4 OP2 U B 827 -90.893 -57.117 30.554 1.00 0.01 O
ATOM 5 O5' U B 827 -93.322 -57.042 30.139 1.00 0.01 O
ATOM 6 C5' U B 827 -93.603 -58.409 30.240 1.00 0.01 C
ATOM 7 C4' U B 827 -94.567 -58.830 29.192 1.00 0.01 C
ATOM 8 O4' U B 827 -95.703 -57.956 29.222 1.00 0.01 O
ATOM 9 C3' U B 827 -94.061 -58.738 27.788 1.00 0.01 C
ATOM 10 O3' U B 827 -93.304 -59.869 27.430 1.00 0.01 O
ATOM 11 C2' U B 827 -95.342 -58.575 26.977 1.00 0.01 C
ATOM 12 O2' U B 827 -95.916 -59.836 26.684 1.00 0.01 O
ATOM 13 C1' U B 827 -96.259 -57.845 27.956 1.00 0.01 C
ATOM 14 N1 U B 827 -96.408 -56.435 27.658 1.00 0.01 N
ATOM 15 C2 U B 827 -97.691 -55.966 27.657 1.00 0.01 C
ATOM 16 O2 U B 827 -98.657 -56.695 27.855 1.00 0.01 O
ATOM 17 N3 U B 827 -97.843 -54.625 27.392 1.00 0.01 N
ATOM 18 C4 U B 827 -96.848 -53.720 27.167 1.00 0.01 C
ATOM 19 O4 U B 827 -97.121 -52.529 26.975 1.00 0.01 O
ATOM 20 C5 U B 827 -95.546 -54.311 27.200 1.00 0.01 C
ATOM 21 C6 U B 827 -95.374 -55.608 27.450 1.00 0.01 C
ATOM 22 P A B 828 -92.101 -59.725 26.407 1.00 0.01 P
ATOM 23 OP1 A B 828 -90.878 -60.124 27.116 1.00 0.01 O
ATOM 24 OP2 A B 828 -92.196 -58.366 25.829 1.00 0.01 O
ATOM 25 O5' A B 828 -92.427 -60.792 25.279 1.00 0.01 O
TER

Atoms:
OP1: (-90.268,-53.951,41.204)
OP2: (-91.217,-56.252,40.777)
C3': (-87.697,-56.270,36.786)
C1': (-87.648,-58.637,36.579)
C5': (-89.573,-56.435,38.480)
O4': (-88.420,-58.353,37.682)
C8: (-87.715,-61.074,35.895)
O2': (-86.514,-57.319,34.911)
C6: (-90.392,-61.456,33.778)
C5: (-89.364,-61.139,34.626)
C4: (-89.276,-59.841,35.062)
P: (-90.079,-55.344,40.780)
C4': (-88.267,-56.962,38.014)
C2': (-87.651,-57.375,35.739)
C2: (-91.024,-59.266,33.946)
N1: (-91.224,-60.479,33.445)
N3: (-90.086,-58.837,34.759)
N6: (-90.577,-62.670,33.289)
N7: (-88.375,-61.922,35.152)
N9: (-88.205,-59.799,35.899)
O5': (-89.384,-55.356,39.375)
O3': (-86.372,-55.796,37.041)
C4: (-96.848,-53.720,27.167)
N3: (-97.843,-54.625,27.392)
OP1: (-92.451,-56.333,32.338)
OP2: (-90.893,-57.117,30.554)
C2: (-97.691,-55.966,27.657)
C1': (-96.259,-57.845,27.956)
C3': (-94.061,-58.738,27.788)
O5': (-93.322,-57.042,30.139)
O4': (-95.703,-57.956,29.222)
C5': (-93.603,-58.409,30.240)
P: (-92.120,-56.435,30.927)
C4': (-94.567,-58.830,29.192)
C2': (-95.342,-58.575,26.977)
O2': (-95.916,-59.836,26.684)
N1: (-96.408,-56.435,27.658)
O4: (-97.121,-52.529,26.975)
O2: (-98.657,-56.695,27.855)
C6: (-95.374,-55.608,27.450)
C5: (-95.546,-54.311,27.200)
O3': (-93.304,-59.869,27.430)
Image (generated by PyMOL):
PyMOL image
show in jmol