Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:163:175
Extra
PDB:
ATOM 1 O3' A A 62 60.216 -48.316 126.959 1.00 59.11 O
ATOM 2 P A A 63 60.192 -49.312 125.681 1.00 52.88 P
ATOM 3 OP1 A A 63 59.714 -50.599 126.158 1.00 53.31 O
ATOM 4 OP2 A A 63 61.517 -49.262 125.072 1.00 52.82 O
ATOM 5 O5' A A 63 59.087 -48.713 124.704 1.00 52.22 O
ATOM 6 C5' A A 63 57.793 -49.323 124.608 1.00 52.16 C
ATOM 7 C4' A A 63 56.966 -48.740 123.479 1.00 51.50 C
ATOM 8 O4' A A 63 57.674 -48.922 122.237 1.00 51.18 O
ATOM 9 C3' A A 63 55.616 -49.383 123.252 1.00 51.41 C
ATOM 10 O3' A A 63 54.767 -48.451 122.584 1.00 50.85 O
ATOM 11 C2' A A 63 55.960 -50.491 122.289 1.00 51.37 C
ATOM 12 O2' A A 63 54.863 -50.977 121.552 1.00 51.11 O
ATOM 13 C1' A A 63 56.951 -49.783 121.393 1.00 51.00 C
ATOM 14 N9 A A 63 57.921 -50.663 120.793 1.00 51.13 N
ATOM 15 C8 A A 63 58.232 -51.952 121.055 1.00 51.59 C
ATOM 16 N7 A A 63 59.221 -52.389 120.338 1.00 51.58 N
ATOM 17 C5 A A 63 59.558 -51.289 119.583 1.00 51.08 C
ATOM 18 C6 A A 63 60.526 -51.097 118.625 1.00 50.84 C
ATOM 19 N6 A A 63 61.366 -52.059 118.265 1.00 51.09 N
ATOM 20 N1 A A 63 60.588 -49.875 118.069 1.00 50.36 N
ATOM 21 C2 A A 63 59.728 -48.925 118.458 1.00 50.14 C
ATOM 22 N3 A A 63 58.760 -48.984 119.353 1.00 50.33 N
ATOM 23 C4 A A 63 58.761 -50.215 119.860 1.00 50.80 C
ATOM 24 P A A 64 53.696 -47.621 123.434 1.00 47.20 P
ATOM 25 OP1 A A 64 53.463 -46.343 122.749 1.00 46.64 O
ATOM 26 OP2 A A 64 54.217 -47.612 124.842 1.00 47.77 O
ATOM 27 O5' A A 64 52.389 -48.486 123.322 1.00 47.22 O
TER
ATOM 1 O3' A B 74 61.227 -46.143 118.795 1.00 48.68 O
ATOM 2 P U B 75 61.385 -45.616 117.295 1.00 48.22 P
ATOM 3 OP1 U B 75 60.094 -45.888 116.606 1.00 47.89 O
ATOM 4 OP2 U B 75 62.590 -46.185 116.774 1.00 48.35 O
ATOM 5 O5' U B 75 61.560 -44.048 117.467 1.00 47.97 O
ATOM 6 C5' U B 75 60.547 -43.288 118.086 1.00 47.88 C
ATOM 7 C4' U B 75 60.984 -41.881 118.347 1.00 47.74 C
ATOM 8 O4' U B 75 62.122 -41.857 119.240 1.00 48.19 O
ATOM 9 C3' U B 75 61.448 -41.086 117.146 1.00 47.25 C
ATOM 10 O3' U B 75 60.374 -40.624 116.360 1.00 46.76 O
ATOM 11 C2' U B 75 62.196 -39.968 117.812 1.00 47.36 C
ATOM 12 O2' U B 75 61.273 -39.069 118.380 1.00 47.26 O
ATOM 13 C1' U B 75 62.904 -40.718 118.944 1.00 47.98 C
ATOM 14 N1 U B 75 64.261 -41.156 118.541 1.00 48.13 N
ATOM 15 C2 U B 75 65.237 -40.168 118.426 1.00 48.05 C
ATOM 16 O2 U B 75 65.002 -39.010 118.691 1.00 47.89 O
ATOM 17 N3 U B 75 66.505 -40.540 118.037 1.00 48.19 N
ATOM 18 C4 U B 75 66.851 -41.854 117.761 1.00 48.40 C
ATOM 19 O4 U B 75 68.009 -42.139 117.426 1.00 48.54 O
ATOM 20 C5 U B 75 65.768 -42.811 117.903 1.00 48.47 C
ATOM 21 C6 U B 75 64.542 -42.463 118.283 1.00 48.34 C
ATOM 22 P U B 76 60.556 -40.378 114.785 1.00 48.25 P
ATOM 23 OP1 U B 76 59.243 -39.908 114.277 1.00 47.84 O
ATOM 24 OP2 U B 76 61.152 -41.602 114.219 1.00 48.39 O
ATOM 25 O5' U B 76 61.603 -39.198 114.709 1.00 48.15 O
TER
ATOM 2 P A A 63 60.192 -49.312 125.681 1.00 52.88 P
ATOM 3 OP1 A A 63 59.714 -50.599 126.158 1.00 53.31 O
ATOM 4 OP2 A A 63 61.517 -49.262 125.072 1.00 52.82 O
ATOM 5 O5' A A 63 59.087 -48.713 124.704 1.00 52.22 O
ATOM 6 C5' A A 63 57.793 -49.323 124.608 1.00 52.16 C
ATOM 7 C4' A A 63 56.966 -48.740 123.479 1.00 51.50 C
ATOM 8 O4' A A 63 57.674 -48.922 122.237 1.00 51.18 O
ATOM 9 C3' A A 63 55.616 -49.383 123.252 1.00 51.41 C
ATOM 10 O3' A A 63 54.767 -48.451 122.584 1.00 50.85 O
ATOM 11 C2' A A 63 55.960 -50.491 122.289 1.00 51.37 C
ATOM 12 O2' A A 63 54.863 -50.977 121.552 1.00 51.11 O
ATOM 13 C1' A A 63 56.951 -49.783 121.393 1.00 51.00 C
ATOM 14 N9 A A 63 57.921 -50.663 120.793 1.00 51.13 N
ATOM 15 C8 A A 63 58.232 -51.952 121.055 1.00 51.59 C
ATOM 16 N7 A A 63 59.221 -52.389 120.338 1.00 51.58 N
ATOM 17 C5 A A 63 59.558 -51.289 119.583 1.00 51.08 C
ATOM 18 C6 A A 63 60.526 -51.097 118.625 1.00 50.84 C
ATOM 19 N6 A A 63 61.366 -52.059 118.265 1.00 51.09 N
ATOM 20 N1 A A 63 60.588 -49.875 118.069 1.00 50.36 N
ATOM 21 C2 A A 63 59.728 -48.925 118.458 1.00 50.14 C
ATOM 22 N3 A A 63 58.760 -48.984 119.353 1.00 50.33 N
ATOM 23 C4 A A 63 58.761 -50.215 119.860 1.00 50.80 C
ATOM 24 P A A 64 53.696 -47.621 123.434 1.00 47.20 P
ATOM 25 OP1 A A 64 53.463 -46.343 122.749 1.00 46.64 O
ATOM 26 OP2 A A 64 54.217 -47.612 124.842 1.00 47.77 O
ATOM 27 O5' A A 64 52.389 -48.486 123.322 1.00 47.22 O
TER
ATOM 1 O3' A B 74 61.227 -46.143 118.795 1.00 48.68 O
ATOM 2 P U B 75 61.385 -45.616 117.295 1.00 48.22 P
ATOM 3 OP1 U B 75 60.094 -45.888 116.606 1.00 47.89 O
ATOM 4 OP2 U B 75 62.590 -46.185 116.774 1.00 48.35 O
ATOM 5 O5' U B 75 61.560 -44.048 117.467 1.00 47.97 O
ATOM 6 C5' U B 75 60.547 -43.288 118.086 1.00 47.88 C
ATOM 7 C4' U B 75 60.984 -41.881 118.347 1.00 47.74 C
ATOM 8 O4' U B 75 62.122 -41.857 119.240 1.00 48.19 O
ATOM 9 C3' U B 75 61.448 -41.086 117.146 1.00 47.25 C
ATOM 10 O3' U B 75 60.374 -40.624 116.360 1.00 46.76 O
ATOM 11 C2' U B 75 62.196 -39.968 117.812 1.00 47.36 C
ATOM 12 O2' U B 75 61.273 -39.069 118.380 1.00 47.26 O
ATOM 13 C1' U B 75 62.904 -40.718 118.944 1.00 47.98 C
ATOM 14 N1 U B 75 64.261 -41.156 118.541 1.00 48.13 N
ATOM 15 C2 U B 75 65.237 -40.168 118.426 1.00 48.05 C
ATOM 16 O2 U B 75 65.002 -39.010 118.691 1.00 47.89 O
ATOM 17 N3 U B 75 66.505 -40.540 118.037 1.00 48.19 N
ATOM 18 C4 U B 75 66.851 -41.854 117.761 1.00 48.40 C
ATOM 19 O4 U B 75 68.009 -42.139 117.426 1.00 48.54 O
ATOM 20 C5 U B 75 65.768 -42.811 117.903 1.00 48.47 C
ATOM 21 C6 U B 75 64.542 -42.463 118.283 1.00 48.34 C
ATOM 22 P U B 76 60.556 -40.378 114.785 1.00 48.25 P
ATOM 23 OP1 U B 76 59.243 -39.908 114.277 1.00 47.84 O
ATOM 24 OP2 U B 76 61.152 -41.602 114.219 1.00 48.39 O
ATOM 25 O5' U B 76 61.603 -39.198 114.709 1.00 48.15 O
TER
Atoms:
OP1: (59.714,-50.599,126.158)
OP2: (61.517,-49.262,125.072)
C3': (55.616,-49.383,123.252)
C1': (56.951,-49.783,121.393)
C5': (57.793,-49.323,124.608)
O4': (57.674,-48.922,122.237)
C8: (58.232,-51.952,121.055)
O2': (54.863,-50.977,121.552)
C6: (60.526,-51.097,118.625)
C5: (59.558,-51.289,119.583)
C4: (58.761,-50.215,119.860)
P: (60.192,-49.312,125.681)
C4': (56.966,-48.740,123.479)
C2': (55.960,-50.491,122.289)
C2: (59.728,-48.925,118.458)
N1: (60.588,-49.875,118.069)
N3: (58.760,-48.984,119.353)
N6: (61.366,-52.059,118.265)
N7: (59.221,-52.389,120.338)
N9: (57.921,-50.663,120.793)
O5': (59.087,-48.713,124.704)
O3': (54.767,-48.451,122.584)
OP2: (61.517,-49.262,125.072)
C3': (55.616,-49.383,123.252)
C1': (56.951,-49.783,121.393)
C5': (57.793,-49.323,124.608)
O4': (57.674,-48.922,122.237)
C8: (58.232,-51.952,121.055)
O2': (54.863,-50.977,121.552)
C6: (60.526,-51.097,118.625)
C5: (59.558,-51.289,119.583)
C4: (58.761,-50.215,119.860)
P: (60.192,-49.312,125.681)
C4': (56.966,-48.740,123.479)
C2': (55.960,-50.491,122.289)
C2: (59.728,-48.925,118.458)
N1: (60.588,-49.875,118.069)
N3: (58.760,-48.984,119.353)
N6: (61.366,-52.059,118.265)
N7: (59.221,-52.389,120.338)
N9: (57.921,-50.663,120.793)
O5': (59.087,-48.713,124.704)
O3': (54.767,-48.451,122.584)
C4: (66.851,-41.854,117.761)
N3: (66.505,-40.540,118.037)
OP1: (60.094,-45.888,116.606)
OP2: (62.590,-46.185,116.774)
C2: (65.237,-40.168,118.426)
C1': (62.904,-40.718,118.944)
C3': (61.448,-41.086,117.146)
O5': (61.560,-44.048,117.467)
O4': (62.122,-41.857,119.240)
C5': (60.547,-43.288,118.086)
P: (61.385,-45.616,117.295)
C4': (60.984,-41.881,118.347)
C2': (62.196,-39.968,117.812)
O2': (61.273,-39.069,118.380)
N1: (64.261,-41.156,118.541)
O4: (68.009,-42.139,117.426)
O2: (65.002,-39.010,118.691)
C6: (64.542,-42.463,118.283)
C5: (65.768,-42.811,117.903)
O3': (60.374,-40.624,116.360)
N3: (66.505,-40.540,118.037)
OP1: (60.094,-45.888,116.606)
OP2: (62.590,-46.185,116.774)
C2: (65.237,-40.168,118.426)
C1': (62.904,-40.718,118.944)
C3': (61.448,-41.086,117.146)
O5': (61.560,-44.048,117.467)
O4': (62.122,-41.857,119.240)
C5': (60.547,-43.288,118.086)
P: (61.385,-45.616,117.295)
C4': (60.984,-41.881,118.347)
C2': (62.196,-39.968,117.812)
O2': (61.273,-39.069,118.380)
N1: (64.261,-41.156,118.541)
O4: (68.009,-42.139,117.426)
O2: (65.002,-39.010,118.691)
C6: (64.542,-42.463,118.283)
C5: (65.768,-42.811,117.903)
O3': (60.374,-40.624,116.360)
Image (generated by PyMOL):