ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:563:575

Extra

PDB:
ATOM 1 O3' A A 62 132.450 -54.250 174.362 1.00 68.26 O
ATOM 2 P A A 63 132.294 -55.067 175.764 1.00 61.39 P
ATOM 3 OP1 A A 63 132.966 -56.360 175.546 1.00 61.89 O
ATOM 4 OP2 A A 63 130.872 -55.087 176.115 1.00 61.34 O
ATOM 5 O5' A A 63 133.111 -54.218 176.860 1.00 60.56 O
ATOM 6 C5' A A 63 134.398 -54.674 177.318 1.00 60.43 C
ATOM 7 C4' A A 63 134.887 -53.972 178.576 1.00 59.62 C
ATOM 8 O4' A A 63 133.922 -54.160 179.628 1.00 59.29 O
ATOM 9 C3' A A 63 136.190 -54.524 179.146 1.00 59.49 C
ATOM 10 O3' A A 63 136.842 -53.521 179.919 1.00 58.79 O
ATOM 11 C2' A A 63 135.698 -55.606 180.066 1.00 59.50 C
ATOM 12 O2' A A 63 136.636 -56.007 181.035 1.00 59.18 O
ATOM 13 C1' A A 63 134.507 -54.904 180.685 1.00 59.06 C
ATOM 14 N9 A A 63 133.489 -55.806 181.183 1.00 59.23 N
ATOM 15 C8 A A 63 133.354 -57.158 181.031 1.00 59.77 C
ATOM 16 N7 A A 63 132.258 -57.589 181.591 1.00 59.77 N
ATOM 17 C5 A A 63 131.680 -56.436 182.107 1.00 59.19 C
ATOM 18 C6 A A 63 130.521 -56.213 182.811 1.00 58.91 C
ATOM 19 N6 A A 63 129.729 -57.225 183.116 1.00 59.21 N
ATOM 20 N1 A A 63 130.226 -54.944 183.185 1.00 58.34 N
ATOM 21 C2 A A 63 131.055 -53.953 182.849 1.00 58.08 C
ATOM 22 N3 A A 63 132.197 -54.049 182.195 1.00 58.30 N
ATOM 23 C4 A A 63 132.426 -55.326 181.866 1.00 58.85 C
ATOM 24 P A A 64 138.051 -52.720 179.249 1.00 61.58 P
ATOM 25 OP1 A A 64 138.097 -51.400 179.867 1.00 60.88 O
ATOM 26 OP2 A A 64 137.840 -52.816 177.757 1.00 62.27 O
ATOM 27 O5' A A 64 139.338 -53.564 179.649 1.00 61.64 O
TER

ATOM 1 O3' A B 74 129.580 -51.230 181.821 1.00 57.37 O
ATOM 2 P U B 75 129.051 -50.452 183.112 1.00 54.60 P
ATOM 3 OP1 U B 75 130.129 -50.510 184.125 1.00 54.13 O
ATOM 4 OP2 U B 75 127.695 -51.045 183.459 1.00 54.77 O
ATOM 5 O5' U B 75 128.917 -48.949 182.579 1.00 54.36 O
ATOM 6 C5' U B 75 130.086 -48.186 182.271 1.00 54.15 C
ATOM 7 C4' U B 75 129.759 -46.796 181.780 1.00 53.95 C
ATOM 8 O4' U B 75 128.880 -46.869 180.632 1.00 54.52 O
ATOM 9 C3' U B 75 129.008 -45.897 182.743 1.00 53.35 C
ATOM 10 O3' U B 75 129.844 -45.288 183.704 1.00 52.72 O
ATOM 11 C2' U B 75 128.382 -44.893 181.814 1.00 53.49 C
ATOM 12 O2' U B 75 129.362 -43.969 181.409 1.00 53.30 O
ATOM 13 C1' U B 75 128.016 -45.755 180.624 1.00 54.26 C
ATOM 14 N1 U B 75 126.642 -46.228 180.709 1.00 54.50 N
ATOM 15 C2 U B 75 125.617 -45.379 180.375 1.00 54.48 C
ATOM 16 O2 U B 75 125.821 -44.251 180.012 1.00 54.28 O
ATOM 17 N3 U B 75 124.336 -45.861 180.466 1.00 54.72 N
ATOM 18 C4 U B 75 124.008 -47.135 180.861 1.00 54.97 C
ATOM 19 O4 U B 75 122.840 -47.499 180.913 1.00 55.19 O
ATOM 20 C5 U B 75 125.131 -47.950 181.205 1.00 54.96 C
ATOM 21 C6 U B 75 126.377 -47.487 181.116 1.00 54.73 C
ATOM 22 P U B 76 129.234 -44.873 185.112 1.00 55.36 P
ATOM 23 OP1 U B 76 130.277 -44.176 185.859 1.00 54.78 O
ATOM 24 OP2 U B 76 128.637 -46.097 185.699 1.00 55.54 O
ATOM 25 O5' U B 76 128.100 -43.838 184.700 1.00 55.32 O
TER

Atoms:
OP1: (132.966,-56.360,175.546)
OP2: (130.872,-55.087,176.115)
C3': (136.190,-54.524,179.146)
C1': (134.507,-54.904,180.685)
C5': (134.398,-54.674,177.318)
O4': (133.922,-54.160,179.628)
C8: (133.354,-57.158,181.031)
O2': (136.636,-56.007,181.035)
C6: (130.521,-56.213,182.811)
C5: (131.680,-56.436,182.107)
C4: (132.426,-55.326,181.866)
P: (132.294,-55.067,175.764)
C4': (134.887,-53.972,178.576)
C2': (135.698,-55.606,180.066)
C2: (131.055,-53.953,182.849)
N1: (130.226,-54.944,183.185)
N3: (132.197,-54.049,182.195)
N6: (129.729,-57.225,183.116)
N7: (132.258,-57.589,181.591)
N9: (133.489,-55.806,181.183)
O5': (133.111,-54.218,176.860)
O3': (136.842,-53.521,179.919)
C4: (124.008,-47.135,180.861)
N3: (124.336,-45.861,180.466)
OP1: (130.129,-50.510,184.125)
OP2: (127.695,-51.045,183.459)
C2: (125.617,-45.379,180.375)
C1': (128.016,-45.755,180.624)
C3': (129.008,-45.897,182.743)
O5': (128.917,-48.949,182.579)
O4': (128.880,-46.869,180.632)
C5': (130.086,-48.186,182.271)
P: (129.051,-50.452,183.112)
C4': (129.759,-46.796,181.780)
C2': (128.382,-44.893,181.814)
O2': (129.362,-43.969,181.409)
N1: (126.642,-46.228,180.709)
O4: (122.840,-47.499,180.913)
O2: (125.821,-44.251,180.012)
C6: (126.377,-47.487,181.116)
C5: (125.131,-47.950,181.205)
O3': (129.844,-45.288,183.704)
Image (generated by PyMOL):
PyMOL image
show in jmol