Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1280:A1641
Extra
PDB:
ATOM 1 O3' A A1279 3.121 111.196 197.772 1.00 12.90 O
ATOM 2 P A A1280 2.035 110.006 197.858 1.00 2.66 P
ATOM 3 OP1 A A1280 0.780 110.563 198.423 1.00 2.66 O
ATOM 4 OP2 A A1280 2.671 108.869 198.549 1.00 2.66 O
ATOM 5 O5' A A1280 1.837 109.642 196.331 1.00 2.66 O
ATOM 6 C5' A A1280 2.476 108.505 195.786 1.00 2.66 C
ATOM 7 C4' A A1280 2.404 108.514 194.293 1.00 2.66 C
ATOM 8 O4' A A1280 1.036 108.330 193.880 1.00 2.66 O
ATOM 9 C3' A A1280 2.834 109.801 193.643 1.00 2.66 C
ATOM 10 O3' A A1280 4.229 109.849 193.467 1.00 2.66 O
ATOM 11 C2' A A1280 2.059 109.811 192.338 1.00 2.66 C
ATOM 12 O2' A A1280 2.743 109.046 191.355 1.00 2.66 O
ATOM 13 C1' A A1280 0.779 109.065 192.717 1.00 2.66 C
ATOM 14 N9 A A1280 -0.370 109.949 192.974 1.00 3.08 N
ATOM 15 C8 A A1280 -1.087 110.070 194.149 1.00 3.08 C
ATOM 16 N7 A A1280 -2.120 110.889 194.086 1.00 3.08 N
ATOM 17 C5 A A1280 -2.093 111.315 192.762 1.00 3.08 C
ATOM 18 C6 A A1280 -2.910 112.193 192.034 1.00 3.08 C
ATOM 19 N6 A A1280 -3.941 112.830 192.544 1.00 3.08 N
ATOM 20 N1 A A1280 -2.637 112.417 190.750 1.00 3.08 N
ATOM 21 C2 A A1280 -1.597 111.763 190.228 1.00 3.08 C
ATOM 22 N3 A A1280 -0.733 110.903 190.788 1.00 3.08 N
ATOM 23 C4 A A1280 -1.042 110.720 192.073 1.00 3.08 C
ATOM 24 P G A1281 5.005 111.240 193.664 1.00 13.13 P
ATOM 25 OP1 G A1281 6.450 110.986 193.425 1.00 13.13 O
ATOM 26 OP2 G A1281 4.576 111.796 194.982 1.00 13.13 O
ATOM 27 O5' G A1281 4.423 112.121 192.479 1.00 13.13 O
TER
ATOM 1 O3' U B1640 -3.665 117.330 185.030 1.00 10.26 O
ATOM 2 P U B1641 -5.010 117.012 184.188 1.00 0.56 P
ATOM 3 OP1 U B1641 -4.675 115.971 183.159 1.00 0.56 O
ATOM 4 OP2 U B1641 -5.543 118.325 183.728 1.00 0.56 O
ATOM 5 O5' U B1641 -5.975 116.373 185.260 1.00 0.56 O
ATOM 6 C5' U B1641 -5.896 114.995 185.559 1.00 0.56 C
ATOM 7 C4' U B1641 -5.589 114.792 187.005 1.00 0.56 C
ATOM 8 O4' U B1641 -6.691 115.260 187.807 1.00 0.56 O
ATOM 9 C3' U B1641 -5.412 113.377 187.445 1.00 0.56 C
ATOM 10 O3' U B1641 -4.136 112.889 187.132 1.00 0.56 O
ATOM 11 C2' U B1641 -5.698 113.458 188.940 1.00 0.56 C
ATOM 12 O2' U B1641 -4.598 114.008 189.640 1.00 0.56 O
ATOM 13 C1' U B1641 -6.804 114.478 188.970 1.00 0.56 C
ATOM 14 N1 U B1641 -8.109 113.875 188.976 1.00 0.56 N
ATOM 15 C2 U B1641 -8.670 113.710 190.176 1.00 0.56 C
ATOM 16 O2 U B1641 -8.033 114.016 191.156 1.00 0.56 O
ATOM 17 N3 U B1641 -9.922 113.180 190.154 1.00 0.56 N
ATOM 18 C4 U B1641 -10.644 112.849 189.030 1.00 0.56 C
ATOM 19 O4 U B1641 -11.785 112.391 189.083 1.00 0.56 O
ATOM 20 C5 U B1641 -9.978 113.098 187.808 1.00 0.56 C
ATOM 21 C6 U B1641 -8.753 113.608 187.828 1.00 0.56 C
ATOM 22 P G B1642 -3.987 111.739 186.034 1.00 0.53 P
ATOM 23 OP1 G B1642 -2.914 112.170 185.089 1.00 0.53 O
ATOM 24 OP2 G B1642 -5.352 111.472 185.487 1.00 0.53 O
ATOM 25 O5' G B1642 -3.509 110.500 186.903 1.00 0.53 O
TER
ATOM 2 P A A1280 2.035 110.006 197.858 1.00 2.66 P
ATOM 3 OP1 A A1280 0.780 110.563 198.423 1.00 2.66 O
ATOM 4 OP2 A A1280 2.671 108.869 198.549 1.00 2.66 O
ATOM 5 O5' A A1280 1.837 109.642 196.331 1.00 2.66 O
ATOM 6 C5' A A1280 2.476 108.505 195.786 1.00 2.66 C
ATOM 7 C4' A A1280 2.404 108.514 194.293 1.00 2.66 C
ATOM 8 O4' A A1280 1.036 108.330 193.880 1.00 2.66 O
ATOM 9 C3' A A1280 2.834 109.801 193.643 1.00 2.66 C
ATOM 10 O3' A A1280 4.229 109.849 193.467 1.00 2.66 O
ATOM 11 C2' A A1280 2.059 109.811 192.338 1.00 2.66 C
ATOM 12 O2' A A1280 2.743 109.046 191.355 1.00 2.66 O
ATOM 13 C1' A A1280 0.779 109.065 192.717 1.00 2.66 C
ATOM 14 N9 A A1280 -0.370 109.949 192.974 1.00 3.08 N
ATOM 15 C8 A A1280 -1.087 110.070 194.149 1.00 3.08 C
ATOM 16 N7 A A1280 -2.120 110.889 194.086 1.00 3.08 N
ATOM 17 C5 A A1280 -2.093 111.315 192.762 1.00 3.08 C
ATOM 18 C6 A A1280 -2.910 112.193 192.034 1.00 3.08 C
ATOM 19 N6 A A1280 -3.941 112.830 192.544 1.00 3.08 N
ATOM 20 N1 A A1280 -2.637 112.417 190.750 1.00 3.08 N
ATOM 21 C2 A A1280 -1.597 111.763 190.228 1.00 3.08 C
ATOM 22 N3 A A1280 -0.733 110.903 190.788 1.00 3.08 N
ATOM 23 C4 A A1280 -1.042 110.720 192.073 1.00 3.08 C
ATOM 24 P G A1281 5.005 111.240 193.664 1.00 13.13 P
ATOM 25 OP1 G A1281 6.450 110.986 193.425 1.00 13.13 O
ATOM 26 OP2 G A1281 4.576 111.796 194.982 1.00 13.13 O
ATOM 27 O5' G A1281 4.423 112.121 192.479 1.00 13.13 O
TER
ATOM 1 O3' U B1640 -3.665 117.330 185.030 1.00 10.26 O
ATOM 2 P U B1641 -5.010 117.012 184.188 1.00 0.56 P
ATOM 3 OP1 U B1641 -4.675 115.971 183.159 1.00 0.56 O
ATOM 4 OP2 U B1641 -5.543 118.325 183.728 1.00 0.56 O
ATOM 5 O5' U B1641 -5.975 116.373 185.260 1.00 0.56 O
ATOM 6 C5' U B1641 -5.896 114.995 185.559 1.00 0.56 C
ATOM 7 C4' U B1641 -5.589 114.792 187.005 1.00 0.56 C
ATOM 8 O4' U B1641 -6.691 115.260 187.807 1.00 0.56 O
ATOM 9 C3' U B1641 -5.412 113.377 187.445 1.00 0.56 C
ATOM 10 O3' U B1641 -4.136 112.889 187.132 1.00 0.56 O
ATOM 11 C2' U B1641 -5.698 113.458 188.940 1.00 0.56 C
ATOM 12 O2' U B1641 -4.598 114.008 189.640 1.00 0.56 O
ATOM 13 C1' U B1641 -6.804 114.478 188.970 1.00 0.56 C
ATOM 14 N1 U B1641 -8.109 113.875 188.976 1.00 0.56 N
ATOM 15 C2 U B1641 -8.670 113.710 190.176 1.00 0.56 C
ATOM 16 O2 U B1641 -8.033 114.016 191.156 1.00 0.56 O
ATOM 17 N3 U B1641 -9.922 113.180 190.154 1.00 0.56 N
ATOM 18 C4 U B1641 -10.644 112.849 189.030 1.00 0.56 C
ATOM 19 O4 U B1641 -11.785 112.391 189.083 1.00 0.56 O
ATOM 20 C5 U B1641 -9.978 113.098 187.808 1.00 0.56 C
ATOM 21 C6 U B1641 -8.753 113.608 187.828 1.00 0.56 C
ATOM 22 P G B1642 -3.987 111.739 186.034 1.00 0.53 P
ATOM 23 OP1 G B1642 -2.914 112.170 185.089 1.00 0.53 O
ATOM 24 OP2 G B1642 -5.352 111.472 185.487 1.00 0.53 O
ATOM 25 O5' G B1642 -3.509 110.500 186.903 1.00 0.53 O
TER
Atoms:
OP1: (0.780,110.563,198.423)
OP2: (2.671,108.869,198.549)
C3': (2.834,109.801,193.643)
C1': (0.779,109.065,192.717)
C5': (2.476,108.505,195.786)
O4': (1.036,108.330,193.880)
C8: (-1.087,110.070,194.149)
O2': (2.743,109.046,191.355)
C6: (-2.910,112.193,192.034)
C5: (-2.093,111.315,192.762)
C4: (-1.042,110.720,192.073)
P: (2.035,110.006,197.858)
C4': (2.404,108.514,194.293)
C2': (2.059,109.811,192.338)
C2: (-1.597,111.763,190.228)
N1: (-2.637,112.417,190.750)
N3: (-0.733,110.903,190.788)
N6: (-3.941,112.830,192.544)
N7: (-2.120,110.889,194.086)
N9: (-0.370,109.949,192.974)
O5': (1.837,109.642,196.331)
O3': (4.229,109.849,193.467)
OP2: (2.671,108.869,198.549)
C3': (2.834,109.801,193.643)
C1': (0.779,109.065,192.717)
C5': (2.476,108.505,195.786)
O4': (1.036,108.330,193.880)
C8: (-1.087,110.070,194.149)
O2': (2.743,109.046,191.355)
C6: (-2.910,112.193,192.034)
C5: (-2.093,111.315,192.762)
C4: (-1.042,110.720,192.073)
P: (2.035,110.006,197.858)
C4': (2.404,108.514,194.293)
C2': (2.059,109.811,192.338)
C2: (-1.597,111.763,190.228)
N1: (-2.637,112.417,190.750)
N3: (-0.733,110.903,190.788)
N6: (-3.941,112.830,192.544)
N7: (-2.120,110.889,194.086)
N9: (-0.370,109.949,192.974)
O5': (1.837,109.642,196.331)
O3': (4.229,109.849,193.467)
C4: (-10.644,112.849,189.030)
N3: (-9.922,113.180,190.154)
OP1: (-4.675,115.971,183.159)
OP2: (-5.543,118.325,183.728)
C2: (-8.670,113.710,190.176)
C1': (-6.804,114.478,188.970)
C3': (-5.412,113.377,187.445)
O5': (-5.975,116.373,185.260)
O4': (-6.691,115.260,187.807)
C5': (-5.896,114.995,185.559)
P: (-5.010,117.012,184.188)
C4': (-5.589,114.792,187.005)
C2': (-5.698,113.458,188.940)
O2': (-4.598,114.008,189.640)
N1: (-8.109,113.875,188.976)
O4: (-11.785,112.391,189.083)
O2: (-8.033,114.016,191.156)
C6: (-8.753,113.608,187.828)
C5: (-9.978,113.098,187.808)
O3': (-4.136,112.889,187.132)
N3: (-9.922,113.180,190.154)
OP1: (-4.675,115.971,183.159)
OP2: (-5.543,118.325,183.728)
C2: (-8.670,113.710,190.176)
C1': (-6.804,114.478,188.970)
C3': (-5.412,113.377,187.445)
O5': (-5.975,116.373,185.260)
O4': (-6.691,115.260,187.807)
C5': (-5.896,114.995,185.559)
P: (-5.010,117.012,184.188)
C4': (-5.589,114.792,187.005)
C2': (-5.698,113.458,188.940)
O2': (-4.598,114.008,189.640)
N1: (-8.109,113.875,188.976)
O4: (-11.785,112.391,189.083)
O2: (-8.033,114.016,191.156)
C6: (-8.753,113.608,187.828)
C5: (-9.978,113.098,187.808)
O3': (-4.136,112.889,187.132)
Image (generated by PyMOL):