ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHZ:A64:A106

Extra

PDB:
ATOM 1 O3' G A 63 22.968 -66.598 -56.928 1.00 55.83 O
ATOM 2 P A A 64 21.616 -66.711 -57.777 1.00 47.37 P
ATOM 3 OP1 A A 64 21.932 -67.405 -59.052 1.00 49.20 O
ATOM 4 OP2 A A 64 21.047 -65.348 -57.820 1.00 57.93 O
ATOM 5 O5' A A 64 20.707 -67.661 -56.907 1.00 52.97 O
ATOM 6 C5' A A 64 20.287 -67.289 -55.617 1.00 52.38 C
ATOM 7 C4' A A 64 18.905 -66.715 -55.639 1.00 48.79 C
ATOM 8 O4' A A 64 18.479 -66.582 -54.277 1.00 56.20 O
ATOM 9 C3' A A 64 18.808 -65.335 -56.273 1.00 67.46 C
ATOM 10 O3' A A 64 17.871 -65.286 -57.387 1.00 88.49 O
ATOM 11 C2' A A 64 18.412 -64.380 -55.139 1.00 57.22 C
ATOM 12 O2' A A 64 17.156 -63.767 -55.296 1.00 78.17 O
ATOM 13 C1' A A 64 18.465 -65.240 -53.877 1.00 50.48 C
ATOM 14 N9 A A 64 19.682 -65.014 -53.114 1.00 66.29 N
ATOM 15 C8 A A 64 20.969 -65.170 -53.609 1.00 90.04 C
ATOM 16 N7 A A 64 21.964 -64.878 -52.801 1.00 64.62 N
ATOM 17 C5 A A 64 21.246 -64.491 -51.710 1.00 70.98 C
ATOM 18 C6 A A 64 21.735 -64.062 -50.521 1.00 68.43 C
ATOM 19 N6 A A 64 23.033 -63.989 -50.332 1.00 61.20 N
ATOM 20 N1 A A 64 20.825 -63.733 -49.586 1.00 94.83 N
ATOM 21 C2 A A 64 19.513 -63.838 -49.894 1.00 84.95 C
ATOM 22 N3 A A 64 18.917 -64.237 -51.007 1.00 52.67 N
ATOM 23 C4 A A 64 19.863 -64.553 -51.868 1.00 63.61 C
ATOM 24 P U A 65 16.370 -65.886 -57.340 1.00 54.09 P
ATOM 25 OP1 U A 65 15.517 -64.897 -58.024 1.00 74.53 O
ATOM 26 OP2 U A 65 16.056 -66.248 -55.945 1.00 75.73 O
ATOM 27 O5' U A 65 16.490 -67.196 -58.214 1.00 49.82 O
TER

ATOM 1 O3' G B 105 24.863 -61.574 -57.783 1.00 56.55 O
ATOM 2 P U B 106 25.178 -60.014 -57.748 1.00 60.21 P
ATOM 3 OP1 U B 106 24.438 -59.391 -58.860 1.00 71.85 O
ATOM 4 OP2 U B 106 26.657 -59.874 -57.707 1.00 70.43 O
ATOM 5 O5' U B 106 24.556 -59.548 -56.379 1.00 45.32 O
ATOM 6 C5' U B 106 23.170 -59.464 -56.213 1.00 51.34 C
ATOM 7 C4' U B 106 22.814 -59.466 -54.762 1.00 52.79 C
ATOM 8 O4' U B 106 22.993 -60.795 -54.230 1.00 57.25 O
ATOM 9 C3' U B 106 23.673 -58.574 -53.898 1.00 50.65 C
ATOM 10 O3' U B 106 23.178 -57.253 -53.847 1.00 52.54 O
ATOM 11 C2' U B 106 23.667 -59.271 -52.559 1.00 53.37 C
ATOM 12 O2' U B 106 22.479 -58.951 -51.868 1.00 59.23 O
ATOM 13 C1' U B 106 23.591 -60.736 -52.969 1.00 57.43 C
ATOM 14 N1 U B 106 24.919 -61.411 -53.061 1.00 59.30 N
ATOM 15 C2 U B 106 25.784 -61.517 -51.989 1.00 48.74 C
ATOM 16 O2 U B 106 25.546 -61.006 -50.922 1.00 55.05 O
ATOM 17 N3 U B 106 26.941 -62.233 -52.219 1.00 49.28 N
ATOM 18 C4 U B 106 27.295 -62.871 -53.399 1.00 54.82 C
ATOM 19 O4 U B 106 28.355 -63.486 -53.505 1.00 57.44 O
ATOM 20 C5 U B 106 26.341 -62.747 -54.453 1.00 52.40 C
ATOM 21 C6 U B 106 25.219 -62.057 -54.250 1.00 56.63 C
ATOM 22 P C B 107 23.995 -56.079 -54.563 1.00 56.64 P
ATOM 23 OP1 C B 107 23.074 -54.965 -54.799 1.00 67.51 O
ATOM 24 OP2 C B 107 24.703 -56.685 -55.729 1.00 53.33 O
ATOM 25 O5' C B 107 25.026 -55.674 -53.435 1.00 69.26 O
TER

Atoms:
OP1: (21.932,-67.405,-59.052)
OP2: (21.047,-65.348,-57.820)
C3': (18.808,-65.335,-56.273)
C1': (18.465,-65.240,-53.877)
C5': (20.287,-67.289,-55.617)
O4': (18.479,-66.582,-54.277)
C8: (20.969,-65.170,-53.609)
O2': (17.156,-63.767,-55.296)
C6: (21.735,-64.062,-50.521)
C5: (21.246,-64.491,-51.710)
C4: (19.863,-64.553,-51.868)
P: (21.616,-66.711,-57.777)
C4': (18.905,-66.715,-55.639)
C2': (18.412,-64.380,-55.139)
C2: (19.513,-63.838,-49.894)
N1: (20.825,-63.733,-49.586)
N3: (18.917,-64.237,-51.007)
N6: (23.033,-63.989,-50.332)
N7: (21.964,-64.878,-52.801)
N9: (19.682,-65.014,-53.114)
O5': (20.707,-67.661,-56.907)
O3': (17.871,-65.286,-57.387)
C4: (27.295,-62.871,-53.399)
N3: (26.941,-62.233,-52.219)
OP1: (24.438,-59.391,-58.860)
OP2: (26.657,-59.874,-57.707)
C2: (25.784,-61.517,-51.989)
C1': (23.591,-60.736,-52.969)
C3': (23.673,-58.574,-53.898)
O5': (24.556,-59.548,-56.379)
O4': (22.993,-60.795,-54.230)
C5': (23.170,-59.464,-56.213)
P: (25.178,-60.014,-57.748)
C4': (22.814,-59.466,-54.762)
C2': (23.667,-59.271,-52.559)
O2': (22.479,-58.951,-51.868)
N1: (24.919,-61.411,-53.061)
O4: (28.355,-63.486,-53.505)
O2: (25.546,-61.006,-50.922)
C6: (25.219,-62.057,-54.250)
C5: (26.341,-62.747,-54.453)
O3': (23.178,-57.253,-53.847)
Image (generated by PyMOL):
PyMOL image
show in jmol