Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3E5F:A11:A12
Extra
PDB:
ATOM 1 O3' G A 10 0.800 8.151 -25.917 1.00 71.10 O
ATOM 2 P G A 11 1.691 9.449 -26.204 1.00 74.40 P
ATOM 3 OP1 G A 11 0.769 10.601 -26.335 1.00 75.38 O
ATOM 4 OP2 G A 11 2.626 9.132 -27.307 1.00 71.37 O
ATOM 5 O5' G A 11 2.527 9.631 -24.862 1.00 75.21 O
ATOM 6 C5' G A 11 1.864 9.926 -23.644 1.00 75.82 C
ATOM 7 C4' G A 11 2.839 9.903 -22.499 1.00 77.22 C
ATOM 8 O4' G A 11 3.424 8.581 -22.402 1.00 75.77 O
ATOM 9 C3' G A 11 4.060 10.797 -22.626 1.00 78.81 C
ATOM 10 O3' G A 11 3.779 12.157 -22.338 1.00 81.68 O
ATOM 11 C2' G A 11 4.977 10.173 -21.587 1.00 77.34 C
ATOM 12 O2' G A 11 4.606 10.490 -20.262 1.00 78.64 O
ATOM 13 C1' G A 11 4.733 8.689 -21.858 1.00 75.22 C
ATOM 14 N9 G A 11 5.703 8.245 -22.850 1.00 69.87 N
ATOM 15 C8 G A 11 5.503 7.980 -24.186 1.00 68.78 C
ATOM 16 N7 G A 11 6.605 7.672 -24.815 1.00 66.96 N
ATOM 17 C5 G A 11 7.585 7.724 -23.830 1.00 65.27 C
ATOM 18 C6 G A 11 8.986 7.488 -23.904 1.00 62.46 C
ATOM 19 O6 G A 11 9.666 7.170 -24.893 1.00 60.14 O
ATOM 20 N1 G A 11 9.599 7.660 -22.664 1.00 61.08 N
ATOM 21 C2 G A 11 8.950 7.999 -21.502 1.00 61.77 C
ATOM 22 N2 G A 11 9.713 8.115 -20.412 1.00 60.10 N
ATOM 23 N3 G A 11 7.649 8.207 -21.418 1.00 64.02 N
ATOM 24 C4 G A 11 7.037 8.059 -22.611 1.00 66.65 C
ATOM 25 P A A 12 4.643 13.314 -23.050 1.00 84.77 P
ATOM 26 OP1 A A 12 4.023 14.601 -22.650 1.00 84.54 O
ATOM 27 OP2 A A 12 4.840 13.012 -24.491 1.00 81.32 O
ATOM 28 O5' A A 12 6.063 13.212 -22.345 1.00 85.39 O
TER
ATOM 1 O3' G B 11 3.779 12.157 -22.338 1.00 81.68 O
ATOM 2 P A B 12 4.643 13.314 -23.050 1.00 84.77 P
ATOM 3 OP1 A B 12 4.023 14.601 -22.650 1.00 84.54 O
ATOM 4 OP2 A B 12 4.840 13.012 -24.491 1.00 81.32 O
ATOM 5 O5' A B 12 6.063 13.212 -22.345 1.00 85.39 O
ATOM 6 C5' A B 12 6.207 13.492 -20.961 1.00 86.52 C
ATOM 7 C4' A B 12 7.644 13.326 -20.558 1.00 87.12 C
ATOM 8 O4' A B 12 8.018 11.930 -20.717 1.00 86.88 O
ATOM 9 C3' A B 12 8.638 14.046 -21.451 1.00 87.85 C
ATOM 10 O3' A B 12 8.745 15.428 -21.158 1.00 89.66 O
ATOM 11 C2' A B 12 9.909 13.270 -21.162 1.00 87.64 C
ATOM 12 O2' A B 12 10.443 13.566 -19.886 1.00 88.33 O
ATOM 13 C1' A B 12 9.362 11.845 -21.173 1.00 86.30 C
ATOM 14 N9 A B 12 9.361 11.304 -22.533 1.00 83.43 N
ATOM 15 C8 A B 12 8.326 11.234 -23.439 1.00 82.74 C
ATOM 16 N7 A B 12 8.670 10.718 -24.597 1.00 80.91 N
ATOM 17 C5 A B 12 10.020 10.426 -24.441 1.00 80.52 C
ATOM 18 C6 A B 12 10.975 9.866 -25.306 1.00 79.11 C
ATOM 19 N6 A B 12 10.713 9.487 -26.560 1.00 77.38 N
ATOM 20 N1 A B 12 12.229 9.710 -24.837 1.00 79.37 N
ATOM 21 C2 A B 12 12.499 10.090 -23.583 1.00 79.36 C
ATOM 22 N3 A B 12 11.693 10.626 -22.677 1.00 80.62 N
ATOM 23 C4 A B 12 10.454 10.773 -23.174 1.00 81.55 C
ATOM 24 P U B 13 8.940 16.471 -22.364 1.00 91.12 P
ATOM 25 OP1 U B 13 8.756 17.846 -21.829 1.00 89.54 O
ATOM 26 OP2 U B 13 8.111 16.008 -23.508 1.00 90.08 O
ATOM 27 O5' U B 13 10.467 16.292 -22.764 1.00 92.57 O
TER
ATOM 2 P G A 11 1.691 9.449 -26.204 1.00 74.40 P
ATOM 3 OP1 G A 11 0.769 10.601 -26.335 1.00 75.38 O
ATOM 4 OP2 G A 11 2.626 9.132 -27.307 1.00 71.37 O
ATOM 5 O5' G A 11 2.527 9.631 -24.862 1.00 75.21 O
ATOM 6 C5' G A 11 1.864 9.926 -23.644 1.00 75.82 C
ATOM 7 C4' G A 11 2.839 9.903 -22.499 1.00 77.22 C
ATOM 8 O4' G A 11 3.424 8.581 -22.402 1.00 75.77 O
ATOM 9 C3' G A 11 4.060 10.797 -22.626 1.00 78.81 C
ATOM 10 O3' G A 11 3.779 12.157 -22.338 1.00 81.68 O
ATOM 11 C2' G A 11 4.977 10.173 -21.587 1.00 77.34 C
ATOM 12 O2' G A 11 4.606 10.490 -20.262 1.00 78.64 O
ATOM 13 C1' G A 11 4.733 8.689 -21.858 1.00 75.22 C
ATOM 14 N9 G A 11 5.703 8.245 -22.850 1.00 69.87 N
ATOM 15 C8 G A 11 5.503 7.980 -24.186 1.00 68.78 C
ATOM 16 N7 G A 11 6.605 7.672 -24.815 1.00 66.96 N
ATOM 17 C5 G A 11 7.585 7.724 -23.830 1.00 65.27 C
ATOM 18 C6 G A 11 8.986 7.488 -23.904 1.00 62.46 C
ATOM 19 O6 G A 11 9.666 7.170 -24.893 1.00 60.14 O
ATOM 20 N1 G A 11 9.599 7.660 -22.664 1.00 61.08 N
ATOM 21 C2 G A 11 8.950 7.999 -21.502 1.00 61.77 C
ATOM 22 N2 G A 11 9.713 8.115 -20.412 1.00 60.10 N
ATOM 23 N3 G A 11 7.649 8.207 -21.418 1.00 64.02 N
ATOM 24 C4 G A 11 7.037 8.059 -22.611 1.00 66.65 C
ATOM 25 P A A 12 4.643 13.314 -23.050 1.00 84.77 P
ATOM 26 OP1 A A 12 4.023 14.601 -22.650 1.00 84.54 O
ATOM 27 OP2 A A 12 4.840 13.012 -24.491 1.00 81.32 O
ATOM 28 O5' A A 12 6.063 13.212 -22.345 1.00 85.39 O
TER
ATOM 1 O3' G B 11 3.779 12.157 -22.338 1.00 81.68 O
ATOM 2 P A B 12 4.643 13.314 -23.050 1.00 84.77 P
ATOM 3 OP1 A B 12 4.023 14.601 -22.650 1.00 84.54 O
ATOM 4 OP2 A B 12 4.840 13.012 -24.491 1.00 81.32 O
ATOM 5 O5' A B 12 6.063 13.212 -22.345 1.00 85.39 O
ATOM 6 C5' A B 12 6.207 13.492 -20.961 1.00 86.52 C
ATOM 7 C4' A B 12 7.644 13.326 -20.558 1.00 87.12 C
ATOM 8 O4' A B 12 8.018 11.930 -20.717 1.00 86.88 O
ATOM 9 C3' A B 12 8.638 14.046 -21.451 1.00 87.85 C
ATOM 10 O3' A B 12 8.745 15.428 -21.158 1.00 89.66 O
ATOM 11 C2' A B 12 9.909 13.270 -21.162 1.00 87.64 C
ATOM 12 O2' A B 12 10.443 13.566 -19.886 1.00 88.33 O
ATOM 13 C1' A B 12 9.362 11.845 -21.173 1.00 86.30 C
ATOM 14 N9 A B 12 9.361 11.304 -22.533 1.00 83.43 N
ATOM 15 C8 A B 12 8.326 11.234 -23.439 1.00 82.74 C
ATOM 16 N7 A B 12 8.670 10.718 -24.597 1.00 80.91 N
ATOM 17 C5 A B 12 10.020 10.426 -24.441 1.00 80.52 C
ATOM 18 C6 A B 12 10.975 9.866 -25.306 1.00 79.11 C
ATOM 19 N6 A B 12 10.713 9.487 -26.560 1.00 77.38 N
ATOM 20 N1 A B 12 12.229 9.710 -24.837 1.00 79.37 N
ATOM 21 C2 A B 12 12.499 10.090 -23.583 1.00 79.36 C
ATOM 22 N3 A B 12 11.693 10.626 -22.677 1.00 80.62 N
ATOM 23 C4 A B 12 10.454 10.773 -23.174 1.00 81.55 C
ATOM 24 P U B 13 8.940 16.471 -22.364 1.00 91.12 P
ATOM 25 OP1 U B 13 8.756 17.846 -21.829 1.00 89.54 O
ATOM 26 OP2 U B 13 8.111 16.008 -23.508 1.00 90.08 O
ATOM 27 O5' U B 13 10.467 16.292 -22.764 1.00 92.57 O
TER
Atoms:
OP1: (0.769,10.601,-26.335)
OP2: (2.626,9.132,-27.307)
C3': (4.060,10.797,-22.626)
C1': (4.733,8.689,-21.858)
C5': (1.864,9.926,-23.644)
O6: (9.666,7.170,-24.893)
O4': (3.424,8.581,-22.402)
C8: (5.503,7.980,-24.186)
C2: (8.950,7.999,-21.502)
C6: (8.986,7.488,-23.904)
C5: (7.585,7.724,-23.830)
C4: (7.037,8.059,-22.611)
P: (1.691,9.449,-26.204)
C4': (2.839,9.903,-22.499)
C2': (4.977,10.173,-21.587)
O2': (4.606,10.490,-20.262)
N1: (9.599,7.660,-22.664)
N2: (9.713,8.115,-20.412)
N3: (7.649,8.207,-21.418)
N7: (6.605,7.672,-24.815)
N9: (5.703,8.245,-22.850)
O5': (2.527,9.631,-24.862)
O3': (3.779,12.157,-22.338)
OP2: (2.626,9.132,-27.307)
C3': (4.060,10.797,-22.626)
C1': (4.733,8.689,-21.858)
C5': (1.864,9.926,-23.644)
O6: (9.666,7.170,-24.893)
O4': (3.424,8.581,-22.402)
C8: (5.503,7.980,-24.186)
C2: (8.950,7.999,-21.502)
C6: (8.986,7.488,-23.904)
C5: (7.585,7.724,-23.830)
C4: (7.037,8.059,-22.611)
P: (1.691,9.449,-26.204)
C4': (2.839,9.903,-22.499)
C2': (4.977,10.173,-21.587)
O2': (4.606,10.490,-20.262)
N1: (9.599,7.660,-22.664)
N2: (9.713,8.115,-20.412)
N3: (7.649,8.207,-21.418)
N7: (6.605,7.672,-24.815)
N9: (5.703,8.245,-22.850)
O5': (2.527,9.631,-24.862)
O3': (3.779,12.157,-22.338)
OP1: (4.023,14.601,-22.650)
OP2: (4.840,13.012,-24.491)
C3': (8.638,14.046,-21.451)
C1': (9.362,11.845,-21.173)
C5': (6.207,13.492,-20.961)
O4': (8.018,11.930,-20.717)
C8: (8.326,11.234,-23.439)
O2': (10.443,13.566,-19.886)
C6: (10.975,9.866,-25.306)
C5: (10.020,10.426,-24.441)
C4: (10.454,10.773,-23.174)
P: (4.643,13.314,-23.050)
C4': (7.644,13.326,-20.558)
C2': (9.909,13.270,-21.162)
C2: (12.499,10.090,-23.583)
N1: (12.229,9.710,-24.837)
N3: (11.693,10.626,-22.677)
N6: (10.713,9.487,-26.560)
N7: (8.670,10.718,-24.597)
N9: (9.361,11.304,-22.533)
O5': (6.063,13.212,-22.345)
O3': (8.745,15.428,-21.158)
OP2: (4.840,13.012,-24.491)
C3': (8.638,14.046,-21.451)
C1': (9.362,11.845,-21.173)
C5': (6.207,13.492,-20.961)
O4': (8.018,11.930,-20.717)
C8: (8.326,11.234,-23.439)
O2': (10.443,13.566,-19.886)
C6: (10.975,9.866,-25.306)
C5: (10.020,10.426,-24.441)
C4: (10.454,10.773,-23.174)
P: (4.643,13.314,-23.050)
C4': (7.644,13.326,-20.558)
C2': (9.909,13.270,-21.162)
C2: (12.499,10.090,-23.583)
N1: (12.229,9.710,-24.837)
N3: (11.693,10.626,-22.677)
N6: (10.713,9.487,-26.560)
N7: (8.670,10.718,-24.597)
N9: (9.361,11.304,-22.533)
O5': (6.063,13.212,-22.345)
O3': (8.745,15.428,-21.158)
Image (generated by PyMOL):