ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1EFW:D21:D13

Extra

PDB:
ATOM 1 P A A 21 59.342 142.816 -11.772 1.00 55.43 P
ATOM 2 OP1 A A 21 60.438 143.729 -12.196 1.00 53.37 O
ATOM 3 OP2 A A 21 59.537 141.921 -10.598 1.00 53.51 O
ATOM 4 O5' A A 21 58.018 143.667 -11.489 1.00 54.52 O
ATOM 5 C5' A A 21 57.120 143.251 -10.442 1.00 49.24 C
ATOM 6 C4' A A 21 56.069 144.302 -10.136 1.00 44.93 C
ATOM 7 O4' A A 21 56.661 145.554 -9.714 1.00 46.56 O
ATOM 8 C3' A A 21 55.083 144.740 -11.202 1.00 41.63 C
ATOM 9 O3' A A 21 54.043 143.790 -11.379 1.00 39.27 O
ATOM 10 C2' A A 21 54.484 145.986 -10.555 1.00 42.62 C
ATOM 11 O2' A A 21 53.505 145.634 -9.598 1.00 38.09 O
ATOM 12 C1' A A 21 55.670 146.559 -9.782 1.00 44.60 C
ATOM 13 N9 A A 21 56.229 147.765 -10.385 1.00 45.06 N
ATOM 14 C8 A A 21 57.243 147.891 -11.296 1.00 47.05 C
ATOM 15 N7 A A 21 57.525 149.136 -11.608 1.00 46.20 N
ATOM 16 C5 A A 21 56.627 149.876 -10.853 1.00 45.66 C
ATOM 17 C6 A A 21 56.429 151.262 -10.709 1.00 44.63 C
ATOM 18 N6 A A 21 57.160 152.183 -11.342 1.00 44.54 N
ATOM 19 N1 A A 21 55.448 151.670 -9.874 1.00 43.61 N
ATOM 20 C2 A A 21 54.730 150.742 -9.225 1.00 42.51 C
ATOM 21 N3 A A 21 54.830 149.418 -9.269 1.00 43.80 N
ATOM 22 C4 A A 21 55.811 149.047 -10.109 1.00 45.50 C
ATOM 23 P G A 22 53.714 143.231 -12.852 1.00 38.13 P
ATOM 24 OP1 G A 22 54.520 141.995 -13.040 1.00 42.74 O
ATOM 25 OP2 G A 22 53.812 144.330 -13.842 1.00 35.48 O
ATOM 26 O5' G A 22 52.197 142.775 -12.755 1.00 35.78 O
TER

ATOM 1 O3' C B 12 47.840 151.013 1.184 1.00 46.30 O
ATOM 2 P A B 13 49.349 150.589 1.526 1.00 45.91 P
ATOM 3 OP1 A B 13 49.426 150.123 2.935 1.00 44.15 O
ATOM 4 OP2 A B 13 50.261 151.702 1.190 1.00 44.20 O
ATOM 5 O5' A B 13 49.651 149.349 0.513 1.00 47.10 O
ATOM 6 C5' A B 13 48.855 148.159 0.664 1.00 45.11 C
ATOM 7 C4' A B 13 49.278 146.938 -0.222 1.00 46.13 C
ATOM 8 O4' A B 13 48.889 147.175 -1.638 1.00 47.00 O
ATOM 9 C3' A B 13 50.763 146.593 -0.339 1.00 45.62 C
ATOM 10 O3' A B 13 51.242 145.860 0.777 1.00 44.80 O
ATOM 11 C2' A B 13 50.816 145.728 -1.587 1.00 45.15 C
ATOM 12 O2' A B 13 50.454 144.385 -1.286 1.00 44.73 O
ATOM 13 C1' A B 13 49.812 146.426 -2.481 1.00 43.46 C
ATOM 14 N9 A B 13 50.525 147.277 -3.461 1.00 38.89 N
ATOM 15 C8 A B 13 50.672 148.625 -3.474 1.00 39.19 C
ATOM 16 N7 A B 13 51.368 149.064 -4.484 1.00 36.49 N
ATOM 17 C5 A B 13 51.703 147.920 -5.185 1.00 37.79 C
ATOM 18 C6 A B 13 52.444 147.694 -6.367 1.00 37.48 C
ATOM 19 N6 A B 13 53.013 148.690 -7.080 1.00 37.61 N
ATOM 20 N1 A B 13 52.582 146.429 -6.790 1.00 34.80 N
ATOM 21 C2 A B 13 52.018 145.444 -6.077 1.00 33.54 C
ATOM 22 N3 A B 13 51.307 145.523 -4.960 1.00 36.88 N
ATOM 23 C4 A B 13 51.194 146.807 -4.574 1.00 38.50 C
ATOM 24 P G B 14 52.872 145.885 1.107 1.00 45.21 P
ATOM 25 OP1 G B 14 53.130 144.918 2.195 1.00 45.82 O
ATOM 26 OP2 G B 14 53.220 147.320 1.295 1.00 43.69 O
ATOM 27 O5' G B 14 53.652 145.404 -0.199 1.00 43.79 O
TER

Atoms:
OP1: (60.438,143.729,-12.196)
OP2: (59.537,141.921,-10.598)
C3': (55.083,144.740,-11.202)
C1': (55.670,146.559,-9.782)
C5': (57.120,143.251,-10.442)
O4': (56.661,145.554,-9.714)
C8: (57.243,147.891,-11.296)
O2': (53.505,145.634,-9.598)
C6: (56.429,151.262,-10.709)
C5: (56.627,149.876,-10.853)
C4: (55.811,149.047,-10.109)
P: (59.342,142.816,-11.772)
C4': (56.069,144.302,-10.136)
C2': (54.484,145.986,-10.555)
C2: (54.730,150.742,-9.225)
N1: (55.448,151.670,-9.874)
N3: (54.830,149.418,-9.269)
N6: (57.160,152.183,-11.342)
N7: (57.525,149.136,-11.608)
N9: (56.229,147.765,-10.385)
O5': (58.018,143.667,-11.489)
O3': (54.043,143.790,-11.379)
OP1: (49.426,150.123,2.935)
OP2: (50.261,151.702,1.190)
C3': (50.763,146.593,-0.339)
C1': (49.812,146.426,-2.481)
C5': (48.855,148.159,0.664)
O4': (48.889,147.175,-1.638)
C8: (50.672,148.625,-3.474)
O2': (50.454,144.385,-1.286)
C6: (52.444,147.694,-6.367)
C5: (51.703,147.920,-5.185)
C4: (51.194,146.807,-4.574)
P: (49.349,150.589,1.526)
C4': (49.278,146.938,-0.222)
C2': (50.816,145.728,-1.587)
C2: (52.018,145.444,-6.077)
N1: (52.582,146.429,-6.790)
N3: (51.307,145.523,-4.960)
N6: (53.013,148.690,-7.080)
N7: (51.368,149.064,-4.484)
N9: (50.525,147.277,-3.461)
O5': (49.651,149.349,0.513)
O3': (51.242,145.860,0.777)
Image (generated by PyMOL):
PyMOL image
show in jmol