Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2417:A2639
Extra
PDB:
ATOM 1 O3' C A2416 53.429 116.974 143.304 1.00 39.84 O
ATOM 2 P A A2417 53.417 117.390 141.761 1.00 39.92 P
ATOM 3 OP1 A A2417 52.007 117.353 141.346 1.00 40.74 O
ATOM 4 OP2 A A2417 54.412 116.575 141.034 1.00 36.75 O
ATOM 5 O5' A A2417 53.916 118.899 141.759 1.00 37.61 O
ATOM 6 C5' A A2417 53.138 119.958 142.312 1.00 39.81 C
ATOM 7 C4' A A2417 53.975 121.204 142.354 1.00 41.48 C
ATOM 8 O4' A A2417 55.137 120.921 143.168 1.00 42.71 O
ATOM 9 C3' A A2417 54.565 121.629 141.012 1.00 43.34 C
ATOM 10 O3' A A2417 53.649 122.407 140.218 1.00 43.81 O
ATOM 11 C2' A A2417 55.804 122.413 141.433 1.00 44.09 C
ATOM 12 O2' A A2417 55.546 123.759 141.775 1.00 45.13 O
ATOM 13 C1' A A2417 56.251 121.642 142.677 1.00 42.79 C
ATOM 14 N9 A A2417 57.335 120.712 142.378 1.00 41.15 N
ATOM 15 C8 A A2417 57.271 119.404 141.989 1.00 42.12 C
ATOM 16 N7 A A2417 58.440 118.869 141.741 1.00 41.53 N
ATOM 17 C5 A A2417 59.333 119.894 141.997 1.00 41.25 C
ATOM 18 C6 A A2417 60.733 119.966 141.912 1.00 41.22 C
ATOM 19 N6 A A2417 61.488 118.947 141.509 1.00 41.45 N
ATOM 20 N1 A A2417 61.326 121.128 142.252 1.00 40.84 N
ATOM 21 C2 A A2417 60.548 122.142 142.642 1.00 40.74 C
ATOM 22 N3 A A2417 59.219 122.198 142.752 1.00 41.47 N
ATOM 23 C4 A A2417 58.667 121.027 142.408 1.00 40.94 C
ATOM 24 P A A2418 53.771 122.418 138.610 1.00 43.30 P
ATOM 25 OP1 A A2418 52.579 123.136 138.103 1.00 44.94 O
ATOM 26 OP2 A A2418 54.087 121.077 138.087 1.00 45.87 O
ATOM 27 O5' A A2418 55.061 123.287 138.307 1.00 43.24 O
TER
ATOM 1 O3' A B2638 54.935 128.368 149.506 1.00 48.56 O
ATOM 2 P A B2639 54.155 129.752 149.678 1.00 48.05 P
ATOM 3 OP1 A B2639 54.649 130.357 150.933 1.00 45.37 O
ATOM 4 OP2 A B2639 52.698 129.493 149.506 1.00 46.96 O
ATOM 5 O5' A B2639 54.700 130.627 148.464 1.00 47.03 O
ATOM 6 C5' A B2639 54.380 130.327 147.088 1.00 45.79 C
ATOM 7 C4' A B2639 55.378 131.009 146.185 1.00 45.40 C
ATOM 8 O4' A B2639 56.676 130.436 146.442 1.00 44.84 O
ATOM 9 C3' A B2639 55.217 130.855 144.689 1.00 46.20 C
ATOM 10 O3' A B2639 54.267 131.805 144.191 1.00 47.79 O
ATOM 11 C2' A B2639 56.623 131.199 144.204 1.00 45.71 C
ATOM 12 O2' A B2639 56.822 132.597 144.189 1.00 49.24 O
ATOM 13 C1' A B2639 57.497 130.602 145.312 1.00 43.82 C
ATOM 14 N9 A B2639 58.172 129.333 145.010 1.00 42.37 N
ATOM 15 C8 A B2639 59.531 129.134 144.963 1.00 42.09 C
ATOM 16 N7 A B2639 59.883 127.937 144.567 1.00 41.58 N
ATOM 17 C5 A B2639 58.679 127.293 144.350 1.00 42.02 C
ATOM 18 C6 A B2639 58.373 126.008 143.879 1.00 41.55 C
ATOM 19 N6 A B2639 59.292 125.134 143.468 1.00 39.69 N
ATOM 20 N1 A B2639 57.070 125.656 143.821 1.00 41.87 N
ATOM 21 C2 A B2639 56.145 126.557 144.185 1.00 42.11 C
ATOM 22 N3 A B2639 56.307 127.807 144.606 1.00 42.16 N
ATOM 23 C4 A B2639 57.612 128.123 144.665 1.00 42.36 C
ATOM 24 P A B2640 52.760 131.344 143.886 1.00 50.52 P
ATOM 25 OP1 A B2640 52.283 132.236 142.811 1.00 51.68 O
ATOM 26 OP2 A B2640 52.002 131.253 145.158 1.00 48.77 O
ATOM 27 O5' A B2640 52.904 129.865 143.307 1.00 50.61 O
TER
ATOM 2 P A A2417 53.417 117.390 141.761 1.00 39.92 P
ATOM 3 OP1 A A2417 52.007 117.353 141.346 1.00 40.74 O
ATOM 4 OP2 A A2417 54.412 116.575 141.034 1.00 36.75 O
ATOM 5 O5' A A2417 53.916 118.899 141.759 1.00 37.61 O
ATOM 6 C5' A A2417 53.138 119.958 142.312 1.00 39.81 C
ATOM 7 C4' A A2417 53.975 121.204 142.354 1.00 41.48 C
ATOM 8 O4' A A2417 55.137 120.921 143.168 1.00 42.71 O
ATOM 9 C3' A A2417 54.565 121.629 141.012 1.00 43.34 C
ATOM 10 O3' A A2417 53.649 122.407 140.218 1.00 43.81 O
ATOM 11 C2' A A2417 55.804 122.413 141.433 1.00 44.09 C
ATOM 12 O2' A A2417 55.546 123.759 141.775 1.00 45.13 O
ATOM 13 C1' A A2417 56.251 121.642 142.677 1.00 42.79 C
ATOM 14 N9 A A2417 57.335 120.712 142.378 1.00 41.15 N
ATOM 15 C8 A A2417 57.271 119.404 141.989 1.00 42.12 C
ATOM 16 N7 A A2417 58.440 118.869 141.741 1.00 41.53 N
ATOM 17 C5 A A2417 59.333 119.894 141.997 1.00 41.25 C
ATOM 18 C6 A A2417 60.733 119.966 141.912 1.00 41.22 C
ATOM 19 N6 A A2417 61.488 118.947 141.509 1.00 41.45 N
ATOM 20 N1 A A2417 61.326 121.128 142.252 1.00 40.84 N
ATOM 21 C2 A A2417 60.548 122.142 142.642 1.00 40.74 C
ATOM 22 N3 A A2417 59.219 122.198 142.752 1.00 41.47 N
ATOM 23 C4 A A2417 58.667 121.027 142.408 1.00 40.94 C
ATOM 24 P A A2418 53.771 122.418 138.610 1.00 43.30 P
ATOM 25 OP1 A A2418 52.579 123.136 138.103 1.00 44.94 O
ATOM 26 OP2 A A2418 54.087 121.077 138.087 1.00 45.87 O
ATOM 27 O5' A A2418 55.061 123.287 138.307 1.00 43.24 O
TER
ATOM 1 O3' A B2638 54.935 128.368 149.506 1.00 48.56 O
ATOM 2 P A B2639 54.155 129.752 149.678 1.00 48.05 P
ATOM 3 OP1 A B2639 54.649 130.357 150.933 1.00 45.37 O
ATOM 4 OP2 A B2639 52.698 129.493 149.506 1.00 46.96 O
ATOM 5 O5' A B2639 54.700 130.627 148.464 1.00 47.03 O
ATOM 6 C5' A B2639 54.380 130.327 147.088 1.00 45.79 C
ATOM 7 C4' A B2639 55.378 131.009 146.185 1.00 45.40 C
ATOM 8 O4' A B2639 56.676 130.436 146.442 1.00 44.84 O
ATOM 9 C3' A B2639 55.217 130.855 144.689 1.00 46.20 C
ATOM 10 O3' A B2639 54.267 131.805 144.191 1.00 47.79 O
ATOM 11 C2' A B2639 56.623 131.199 144.204 1.00 45.71 C
ATOM 12 O2' A B2639 56.822 132.597 144.189 1.00 49.24 O
ATOM 13 C1' A B2639 57.497 130.602 145.312 1.00 43.82 C
ATOM 14 N9 A B2639 58.172 129.333 145.010 1.00 42.37 N
ATOM 15 C8 A B2639 59.531 129.134 144.963 1.00 42.09 C
ATOM 16 N7 A B2639 59.883 127.937 144.567 1.00 41.58 N
ATOM 17 C5 A B2639 58.679 127.293 144.350 1.00 42.02 C
ATOM 18 C6 A B2639 58.373 126.008 143.879 1.00 41.55 C
ATOM 19 N6 A B2639 59.292 125.134 143.468 1.00 39.69 N
ATOM 20 N1 A B2639 57.070 125.656 143.821 1.00 41.87 N
ATOM 21 C2 A B2639 56.145 126.557 144.185 1.00 42.11 C
ATOM 22 N3 A B2639 56.307 127.807 144.606 1.00 42.16 N
ATOM 23 C4 A B2639 57.612 128.123 144.665 1.00 42.36 C
ATOM 24 P A B2640 52.760 131.344 143.886 1.00 50.52 P
ATOM 25 OP1 A B2640 52.283 132.236 142.811 1.00 51.68 O
ATOM 26 OP2 A B2640 52.002 131.253 145.158 1.00 48.77 O
ATOM 27 O5' A B2640 52.904 129.865 143.307 1.00 50.61 O
TER
Atoms:
OP1: (52.007,117.353,141.346)
OP2: (54.412,116.575,141.034)
C3': (54.565,121.629,141.012)
C1': (56.251,121.642,142.677)
C5': (53.138,119.958,142.312)
O4': (55.137,120.921,143.168)
C8: (57.271,119.404,141.989)
O2': (55.546,123.759,141.775)
C6: (60.733,119.966,141.912)
C5: (59.333,119.894,141.997)
C4: (58.667,121.027,142.408)
P: (53.417,117.390,141.761)
C4': (53.975,121.204,142.354)
C2': (55.804,122.413,141.433)
C2: (60.548,122.142,142.642)
N1: (61.326,121.128,142.252)
N3: (59.219,122.198,142.752)
N6: (61.488,118.947,141.509)
N7: (58.440,118.869,141.741)
N9: (57.335,120.712,142.378)
O5': (53.916,118.899,141.759)
O3': (53.649,122.407,140.218)
OP2: (54.412,116.575,141.034)
C3': (54.565,121.629,141.012)
C1': (56.251,121.642,142.677)
C5': (53.138,119.958,142.312)
O4': (55.137,120.921,143.168)
C8: (57.271,119.404,141.989)
O2': (55.546,123.759,141.775)
C6: (60.733,119.966,141.912)
C5: (59.333,119.894,141.997)
C4: (58.667,121.027,142.408)
P: (53.417,117.390,141.761)
C4': (53.975,121.204,142.354)
C2': (55.804,122.413,141.433)
C2: (60.548,122.142,142.642)
N1: (61.326,121.128,142.252)
N3: (59.219,122.198,142.752)
N6: (61.488,118.947,141.509)
N7: (58.440,118.869,141.741)
N9: (57.335,120.712,142.378)
O5': (53.916,118.899,141.759)
O3': (53.649,122.407,140.218)
OP1: (54.649,130.357,150.933)
OP2: (52.698,129.493,149.506)
C3': (55.217,130.855,144.689)
C1': (57.497,130.602,145.312)
C5': (54.380,130.327,147.088)
O4': (56.676,130.436,146.442)
C8: (59.531,129.134,144.963)
O2': (56.822,132.597,144.189)
C6: (58.373,126.008,143.879)
C5: (58.679,127.293,144.350)
C4: (57.612,128.123,144.665)
P: (54.155,129.752,149.678)
C4': (55.378,131.009,146.185)
C2': (56.623,131.199,144.204)
C2: (56.145,126.557,144.185)
N1: (57.070,125.656,143.821)
N3: (56.307,127.807,144.606)
N6: (59.292,125.134,143.468)
N7: (59.883,127.937,144.567)
N9: (58.172,129.333,145.010)
O5': (54.700,130.627,148.464)
O3': (54.267,131.805,144.191)
OP2: (52.698,129.493,149.506)
C3': (55.217,130.855,144.689)
C1': (57.497,130.602,145.312)
C5': (54.380,130.327,147.088)
O4': (56.676,130.436,146.442)
C8: (59.531,129.134,144.963)
O2': (56.822,132.597,144.189)
C6: (58.373,126.008,143.879)
C5: (58.679,127.293,144.350)
C4: (57.612,128.123,144.665)
P: (54.155,129.752,149.678)
C4': (55.378,131.009,146.185)
C2': (56.623,131.199,144.204)
C2: (56.145,126.557,144.185)
N1: (57.070,125.656,143.821)
N3: (56.307,127.807,144.606)
N6: (59.292,125.134,143.468)
N7: (59.883,127.937,144.567)
N9: (58.172,129.333,145.010)
O5': (54.700,130.627,148.464)
O3': (54.267,131.805,144.191)
Image (generated by PyMOL):