ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KH6:A18:A6

Extra

PDB:
ATOM 1 O3' G A 17 40.339 31.468 37.756 1.00 81.27 O
ATOM 2 P A A 18 39.314 30.916 36.661 1.00 80.70 P
ATOM 3 OP1 A A 18 37.991 31.548 36.882 1.00 81.12 O
ATOM 4 OP2 A A 18 39.445 29.435 36.712 1.00 80.81 O
ATOM 5 O5' A A 18 39.885 31.457 35.271 1.00 79.27 O
ATOM 6 C5' A A 18 39.984 32.860 35.012 1.00 75.91 C
ATOM 7 C4' A A 18 40.812 33.116 33.766 1.00 73.68 C
ATOM 8 O4' A A 18 42.109 32.468 33.907 1.00 73.42 O
ATOM 9 C3' A A 18 40.258 32.542 32.473 1.00 72.33 C
ATOM 10 O3' A A 18 39.315 33.430 31.885 1.00 70.46 O
ATOM 11 C2' A A 18 41.508 32.404 31.614 1.00 71.80 C
ATOM 12 O2' A A 18 41.916 33.643 31.082 1.00 72.13 O
ATOM 13 C1' A A 18 42.541 31.971 32.650 1.00 71.60 C
ATOM 14 N9 A A 18 42.711 30.522 32.756 1.00 70.75 N
ATOM 15 C8 A A 18 42.351 29.702 33.796 1.00 70.58 C
ATOM 16 N7 A A 18 42.669 28.443 33.614 1.00 70.14 N
ATOM 17 C5 A A 18 43.273 28.429 32.366 1.00 70.09 C
ATOM 18 C6 A A 18 43.846 27.391 31.597 1.00 70.04 C
ATOM 19 N6 A A 18 43.912 26.117 31.994 1.00 70.31 N
ATOM 20 N1 A A 18 44.361 27.715 30.393 1.00 69.89 N
ATOM 21 C2 A A 18 44.306 28.996 29.998 1.00 70.61 C
ATOM 22 N3 A A 18 43.801 30.058 30.629 1.00 70.76 N
ATOM 23 C4 A A 18 43.296 29.702 31.821 1.00 70.37 C
ATOM 24 P A A 19 38.095 32.828 31.030 1.00 69.23 P
ATOM 25 OP1 A A 19 37.060 33.881 30.829 1.00 70.03 O
ATOM 26 OP2 A A 19 37.722 31.539 31.672 1.00 69.08 O
ATOM 27 O5' A A 19 38.743 32.509 29.613 1.00 67.45 O
TER

ATOM 1 O3' A B 5 50.135 35.095 21.771 1.00 64.91 O
ATOM 2 P A B 6 50.170 35.998 23.097 1.00 68.61 P
ATOM 3 OP1 A B 6 50.822 37.268 22.672 1.00 69.44 O
ATOM 4 OP2 A B 6 50.719 35.237 24.250 1.00 69.95 O
ATOM 5 O5' A B 6 48.634 36.288 23.409 1.00 68.42 O
ATOM 6 C5' A B 6 47.940 37.328 22.729 1.00 68.00 C
ATOM 7 C4' A B 6 46.954 37.980 23.659 1.00 67.56 C
ATOM 8 O4' A B 6 45.804 37.113 23.843 1.00 66.61 O
ATOM 9 C3' A B 6 47.478 38.230 25.063 1.00 67.94 C
ATOM 10 O3' A B 6 48.216 39.451 25.111 1.00 69.37 O
ATOM 11 C2' A B 6 46.188 38.290 25.873 1.00 67.61 C
ATOM 12 O2' A B 6 45.559 39.551 25.774 1.00 68.37 O
ATOM 13 C1' A B 6 45.335 37.224 25.175 1.00 66.65 C
ATOM 14 N9 A B 6 45.433 35.907 25.800 1.00 65.70 N
ATOM 15 C8 A B 6 46.187 34.837 25.388 1.00 65.87 C
ATOM 16 N7 A B 6 46.092 33.790 26.172 1.00 66.00 N
ATOM 17 C5 A B 6 45.213 34.197 27.169 1.00 65.40 C
ATOM 18 C6 A B 6 44.703 33.548 28.319 1.00 64.99 C
ATOM 19 N6 A B 6 45.042 32.311 28.696 1.00 64.00 N
ATOM 20 N1 A B 6 43.830 34.231 29.085 1.00 64.43 N
ATOM 21 C2 A B 6 43.511 35.480 28.733 1.00 65.18 C
ATOM 22 N3 A B 6 43.935 36.203 27.696 1.00 65.62 N
ATOM 23 C4 A B 6 44.791 35.495 26.943 1.00 65.43 C
ATOM 24 P C B 7 49.146 39.779 26.384 1.00 69.89 P
ATOM 25 OP1 C B 7 50.293 40.608 25.951 1.00 70.30 O
ATOM 26 OP2 C B 7 49.410 38.530 27.132 1.00 70.44 O
ATOM 27 O5' C B 7 48.201 40.668 27.295 1.00 70.34 O
TER

Atoms:
OP1: (37.991,31.548,36.882)
OP2: (39.445,29.435,36.712)
C3': (40.258,32.542,32.473)
C1': (42.541,31.971,32.650)
C5': (39.984,32.860,35.012)
O4': (42.109,32.468,33.907)
C8: (42.351,29.702,33.796)
O2': (41.916,33.643,31.082)
C6: (43.846,27.391,31.597)
C5: (43.273,28.429,32.366)
C4: (43.296,29.702,31.821)
P: (39.314,30.916,36.661)
C4': (40.812,33.116,33.766)
C2': (41.508,32.404,31.614)
C2: (44.306,28.996,29.998)
N1: (44.361,27.715,30.393)
N3: (43.801,30.058,30.629)
N6: (43.912,26.117,31.994)
N7: (42.669,28.443,33.614)
N9: (42.711,30.522,32.756)
O5': (39.885,31.457,35.271)
O3': (39.315,33.430,31.885)
OP1: (50.822,37.268,22.672)
OP2: (50.719,35.237,24.250)
C3': (47.478,38.230,25.063)
C1': (45.335,37.224,25.175)
C5': (47.940,37.328,22.729)
O4': (45.804,37.113,23.843)
C8: (46.187,34.837,25.388)
O2': (45.559,39.551,25.774)
C6: (44.703,33.548,28.319)
C5: (45.213,34.197,27.169)
C4: (44.791,35.495,26.943)
P: (50.170,35.998,23.097)
C4': (46.954,37.980,23.659)
C2': (46.188,38.290,25.873)
C2: (43.511,35.480,28.733)
N1: (43.830,34.231,29.085)
N3: (43.935,36.203,27.696)
N6: (45.042,32.311,28.696)
N7: (46.092,33.790,26.172)
N9: (45.433,35.907,25.800)
O5': (48.634,36.288,23.409)
O3': (48.216,39.451,25.111)
Image (generated by PyMOL):
PyMOL image
show in jmol