ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1O0C:B18:B12

Extra

PDB:
ATOM 1 O3' U A 17 6.171 29.099 31.254 1.00110.41 O
ATOM 2 P A A 18 6.269 27.566 30.802 1.00109.72 P
ATOM 3 OP1 A A 18 5.489 27.412 29.544 1.00111.97 O
ATOM 4 OP2 A A 18 5.961 26.708 31.975 1.00109.72 O
ATOM 5 O5' A A 18 7.815 27.372 30.478 1.00106.80 O
ATOM 6 C5' A A 18 8.323 26.092 30.062 1.00 96.23 C
ATOM 7 C4' A A 18 9.736 26.232 29.549 1.00 88.34 C
ATOM 8 O4' A A 18 10.593 26.758 30.580 1.00 81.15 O
ATOM 9 C3' A A 18 10.386 24.936 29.107 1.00 83.13 C
ATOM 10 O3' A A 18 10.091 24.804 27.719 1.00 83.93 O
ATOM 11 C2' A A 18 11.884 25.183 29.312 1.00 83.01 C
ATOM 12 O2' A A 18 12.532 25.638 28.141 1.00 91.07 O
ATOM 13 C1' A A 18 11.905 26.299 30.364 1.00 78.88 C
ATOM 14 N9 A A 18 12.516 26.016 31.660 1.00 72.79 N
ATOM 15 C8 A A 18 11.907 25.584 32.808 1.00 74.82 C
ATOM 16 N7 A A 18 12.712 25.519 33.841 1.00 70.24 N
ATOM 17 C5 A A 18 13.936 25.918 33.331 1.00 67.83 C
ATOM 18 C6 A A 18 15.187 26.081 33.922 1.00 64.86 C
ATOM 19 N6 A A 18 15.419 25.865 35.213 1.00 72.26 N
ATOM 20 N1 A A 18 16.205 26.486 33.136 1.00 63.91 N
ATOM 21 C2 A A 18 15.965 26.707 31.840 1.00 62.88 C
ATOM 22 N3 A A 18 14.828 26.595 31.167 1.00 63.06 N
ATOM 23 C4 A A 18 13.837 26.198 31.981 1.00 69.34 C
ATOM 24 P A A 19 9.984 23.355 27.053 1.00 85.72 P
ATOM 25 OP1 A A 19 8.624 23.239 26.474 1.00 83.27 O
ATOM 26 OP2 A A 19 10.451 22.355 28.053 1.00 90.99 O
ATOM 27 O5' A A 19 11.032 23.416 25.854 1.00 81.45 O
TER

ATOM 1 O3' A B 11 24.185 26.670 21.950 1.00 39.54 O
ATOM 2 P A B 12 23.441 28.095 21.864 1.00 32.51 P
ATOM 3 OP1 A B 12 23.992 28.774 20.669 1.00 36.22 O
ATOM 4 OP2 A B 12 23.493 28.768 23.194 1.00 30.88 O
ATOM 5 O5' A B 12 21.934 27.705 21.547 1.00 40.21 O
ATOM 6 C5' A B 12 20.873 28.664 21.635 1.00 44.78 C
ATOM 7 C4' A B 12 19.570 28.021 21.219 1.00 43.19 C
ATOM 8 O4' A B 12 19.330 26.853 22.038 1.00 43.98 O
ATOM 9 C3' A B 12 18.336 28.887 21.388 1.00 46.86 C
ATOM 10 O3' A B 12 18.122 29.612 20.187 1.00 54.66 O
ATOM 11 C2' A B 12 17.234 27.854 21.561 1.00 46.74 C
ATOM 12 O2' A B 12 16.823 27.330 20.317 1.00 49.09 O
ATOM 13 C1' A B 12 17.956 26.759 22.343 1.00 42.99 C
ATOM 14 N9 A B 12 17.806 26.870 23.788 1.00 42.18 N
ATOM 15 C8 A B 12 18.788 27.085 24.723 1.00 42.73 C
ATOM 16 N7 A B 12 18.346 27.123 25.956 1.00 44.06 N
ATOM 17 C5 A B 12 16.978 26.923 25.827 1.00 50.36 C
ATOM 18 C6 A B 12 15.934 26.856 26.775 1.00 52.33 C
ATOM 19 N6 A B 12 16.115 26.997 28.095 1.00 50.94 N
ATOM 20 N1 A B 12 14.683 26.639 26.312 1.00 49.59 N
ATOM 21 C2 A B 12 14.501 26.510 24.985 1.00 47.83 C
ATOM 22 N3 A B 12 15.396 26.560 24.000 1.00 47.84 N
ATOM 23 C4 A B 12 16.631 26.768 24.494 1.00 49.15 C
ATOM 24 P G B 13 18.248 31.207 20.186 1.00 60.78 P
ATOM 25 OP1 G B 13 17.946 31.685 18.813 1.00 67.25 O
ATOM 26 OP2 G B 13 19.537 31.564 20.823 1.00 64.54 O
ATOM 27 O5' G B 13 17.084 31.679 21.153 1.00 67.78 O
TER

Atoms:
OP1: (5.489,27.412,29.544)
OP2: (5.961,26.708,31.975)
C3': (10.386,24.936,29.107)
C1': (11.905,26.299,30.364)
C5': (8.323,26.092,30.062)
O4': (10.593,26.758,30.580)
C8: (11.907,25.584,32.808)
O2': (12.532,25.638,28.141)
C6: (15.187,26.081,33.922)
C5: (13.936,25.918,33.331)
C4: (13.837,26.198,31.981)
P: (6.269,27.566,30.802)
C4': (9.736,26.232,29.549)
C2': (11.884,25.183,29.312)
C2: (15.965,26.707,31.840)
N1: (16.205,26.486,33.136)
N3: (14.828,26.595,31.167)
N6: (15.419,25.865,35.213)
N7: (12.712,25.519,33.841)
N9: (12.516,26.016,31.660)
O5': (7.815,27.372,30.478)
O3': (10.091,24.804,27.719)
OP1: (23.992,28.774,20.669)
OP2: (23.493,28.768,23.194)
C3': (18.336,28.887,21.388)
C1': (17.956,26.759,22.343)
C5': (20.873,28.664,21.635)
O4': (19.330,26.853,22.038)
C8: (18.788,27.085,24.723)
O2': (16.823,27.330,20.317)
C6: (15.934,26.856,26.775)
C5: (16.978,26.923,25.827)
C4: (16.631,26.768,24.494)
P: (23.441,28.095,21.864)
C4': (19.570,28.021,21.219)
C2': (17.234,27.854,21.561)
C2: (14.501,26.510,24.985)
N1: (14.683,26.639,26.312)
N3: (15.396,26.560,24.000)
N6: (16.115,26.997,28.095)
N7: (18.346,27.123,25.956)
N9: (17.806,26.870,23.788)
O5': (21.934,27.705,21.547)
O3': (18.122,29.612,20.187)
Image (generated by PyMOL):
PyMOL image
show in jmol