ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:02417:02639

Extra

PDB:
ATOM 1 O3' C A2416 53.487 115.610 143.320 1.00 41.45 O
ATOM 2 P A A2417 53.483 115.942 141.747 1.00 41.65 P
ATOM 3 OP1 A A2417 52.082 115.901 141.286 1.00 46.61 O
ATOM 4 OP2 A A2417 54.493 115.097 141.079 1.00 41.66 O
ATOM 5 O5' A A2417 53.976 117.453 141.658 1.00 41.97 O
ATOM 6 C5' A A2417 53.233 118.510 142.284 1.00 41.24 C
ATOM 7 C4' A A2417 54.049 119.781 142.298 1.00 43.04 C
ATOM 8 O4' A A2417 55.229 119.596 143.118 1.00 43.00 O
ATOM 9 C3' A A2417 54.611 120.232 140.960 1.00 42.98 C
ATOM 10 O3' A A2417 53.632 120.946 140.218 1.00 45.68 O
ATOM 11 C2' A A2417 55.757 121.134 141.389 1.00 42.51 C
ATOM 12 O2' A A2417 55.292 122.390 141.829 1.00 45.32 O
ATOM 13 C1' A A2417 56.300 120.368 142.596 1.00 41.62 C
ATOM 14 N9 A A2417 57.403 119.465 142.262 1.00 40.46 N
ATOM 15 C8 A A2417 57.324 118.149 141.882 1.00 39.55 C
ATOM 16 N7 A A2417 58.485 117.601 141.634 1.00 39.82 N
ATOM 17 C5 A A2417 59.393 118.623 141.868 1.00 38.24 C
ATOM 18 C6 A A2417 60.785 118.676 141.774 1.00 38.19 C
ATOM 19 N6 A A2417 61.536 117.632 141.426 1.00 37.39 N
ATOM 20 N1 A A2417 61.392 119.849 142.060 1.00 39.07 N
ATOM 21 C2 A A2417 60.634 120.889 142.427 1.00 38.02 C
ATOM 22 N3 A A2417 59.312 120.957 142.564 1.00 39.36 N
ATOM 23 C4 A A2417 58.743 119.775 142.261 1.00 39.13 C
ATOM 24 P A A2418 53.638 120.885 138.614 1.00 44.32 P
ATOM 25 OP1 A A2418 52.437 121.622 138.158 1.00 47.15 O
ATOM 26 OP2 A A2418 53.836 119.475 138.204 1.00 43.60 O
ATOM 27 O5' A A2418 54.907 121.755 138.206 1.00 45.61 O
TER

ATOM 1 O3' A B2638 55.004 127.213 149.364 1.00 57.13 O
ATOM 2 P A B2639 54.232 128.597 149.650 1.00 55.46 P
ATOM 3 OP1 A B2639 54.784 129.177 150.896 1.00 55.47 O
ATOM 4 OP2 A B2639 52.769 128.379 149.525 1.00 54.39 O
ATOM 5 O5' A B2639 54.704 129.512 148.439 1.00 56.14 O
ATOM 6 C5' A B2639 54.480 129.110 147.078 1.00 53.55 C
ATOM 7 C4' A B2639 55.475 129.787 146.173 1.00 53.35 C
ATOM 8 O4' A B2639 56.779 129.168 146.333 1.00 51.85 O
ATOM 9 C3' A B2639 55.209 129.618 144.691 1.00 53.31 C
ATOM 10 O3' A B2639 54.238 130.573 144.257 1.00 56.25 O
ATOM 11 C2' A B2639 56.578 129.948 144.099 1.00 51.16 C
ATOM 12 O2' A B2639 56.794 131.339 144.070 1.00 48.74 O
ATOM 13 C1' A B2639 57.526 129.355 145.146 1.00 48.76 C
ATOM 14 N9 A B2639 58.190 128.098 144.782 1.00 46.17 N
ATOM 15 C8 A B2639 59.545 127.881 144.757 1.00 45.58 C
ATOM 16 N7 A B2639 59.887 126.669 144.391 1.00 42.14 N
ATOM 17 C5 A B2639 58.676 126.040 144.160 1.00 43.66 C
ATOM 18 C6 A B2639 58.358 124.736 143.752 1.00 42.92 C
ATOM 19 N6 A B2639 59.268 123.796 143.497 1.00 42.27 N
ATOM 20 N1 A B2639 57.056 124.423 143.616 1.00 46.73 N
ATOM 21 C2 A B2639 56.139 125.364 143.881 1.00 47.76 C
ATOM 22 N3 A B2639 56.312 126.627 144.274 1.00 47.60 N
ATOM 23 C4 A B2639 57.619 126.907 144.397 1.00 46.12 C
ATOM 24 P A B2640 52.745 130.102 143.868 1.00 57.64 P
ATOM 25 OP1 A B2640 52.291 131.009 142.785 1.00 57.54 O
ATOM 26 OP2 A B2640 51.946 129.994 145.114 1.00 60.74 O
ATOM 27 O5' A B2640 52.897 128.627 143.288 1.00 56.51 O
TER

Atoms:
OP1: (52.082,115.901,141.286)
OP2: (54.493,115.097,141.079)
C3': (54.611,120.232,140.960)
C1': (56.300,120.368,142.596)
C5': (53.233,118.510,142.284)
O4': (55.229,119.596,143.118)
C8: (57.324,118.149,141.882)
O2': (55.292,122.390,141.829)
C6: (60.785,118.676,141.774)
C5: (59.393,118.623,141.868)
C4: (58.743,119.775,142.261)
P: (53.483,115.942,141.747)
C4': (54.049,119.781,142.298)
C2': (55.757,121.134,141.389)
C2: (60.634,120.889,142.427)
N1: (61.392,119.849,142.060)
N3: (59.312,120.957,142.564)
N6: (61.536,117.632,141.426)
N7: (58.485,117.601,141.634)
N9: (57.403,119.465,142.262)
O5': (53.976,117.453,141.658)
O3': (53.632,120.946,140.218)
OP1: (54.784,129.177,150.896)
OP2: (52.769,128.379,149.525)
C3': (55.209,129.618,144.691)
C1': (57.526,129.355,145.146)
C5': (54.480,129.110,147.078)
O4': (56.779,129.168,146.333)
C8: (59.545,127.881,144.757)
O2': (56.794,131.339,144.070)
C6: (58.358,124.736,143.752)
C5: (58.676,126.040,144.160)
C4: (57.619,126.907,144.397)
P: (54.232,128.597,149.650)
C4': (55.475,129.787,146.173)
C2': (56.578,129.948,144.099)
C2: (56.139,125.364,143.881)
N1: (57.056,124.423,143.616)
N3: (56.312,126.627,144.274)
N6: (59.268,123.796,143.497)
N7: (59.887,126.669,144.391)
N9: (58.190,128.098,144.782)
O5': (54.704,129.512,148.439)
O3': (54.238,130.573,144.257)
Image (generated by PyMOL):
PyMOL image
show in jmol