ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:937:944

Extra

PDB:
ATOM 1 O3' C A 36 82.593 21.509 82.061 1.00 66.03 O
ATOM 2 P A A 37 84.110 22.006 82.248 1.00 65.91 P
ATOM 3 OP1 A A 37 84.185 23.395 81.730 1.00 66.30 O
ATOM 4 OP2 A A 37 85.029 20.962 81.703 1.00 65.00 O
ATOM 5 O5' A A 37 84.280 22.080 83.825 1.00 64.22 O
ATOM 6 C5' A A 37 83.489 22.994 84.587 1.00 64.96 C
ATOM 7 C4' A A 37 83.626 22.706 86.054 1.00 66.42 C
ATOM 8 O4' A A 37 83.239 21.330 86.302 1.00 66.84 O
ATOM 9 C3' A A 37 85.029 22.784 86.628 1.00 66.90 C
ATOM 10 O3' A A 37 85.418 24.123 86.905 1.00 69.54 O
ATOM 11 C2' A A 37 84.880 21.955 87.895 1.00 66.17 C
ATOM 12 O2' A A 37 84.176 22.640 88.912 1.00 65.34 O
ATOM 13 C1' A A 37 83.986 20.823 87.397 1.00 65.72 C
ATOM 14 N9 A A 37 84.733 19.643 86.960 1.00 64.26 N
ATOM 15 C8 A A 37 84.984 19.197 85.682 1.00 63.67 C
ATOM 16 N7 A A 37 85.668 18.079 85.639 1.00 63.42 N
ATOM 17 C5 A A 37 85.892 17.774 86.976 1.00 62.77 C
ATOM 18 C6 A A 37 86.562 16.710 87.606 1.00 61.98 C
ATOM 19 N6 A A 37 87.154 15.710 86.945 1.00 62.09 N
ATOM 20 N1 A A 37 86.602 16.706 88.957 1.00 61.32 N
ATOM 21 C2 A A 37 86.005 17.704 89.620 1.00 61.87 C
ATOM 22 N3 A A 37 85.346 18.756 89.144 1.00 62.30 N
ATOM 23 C4 A A 37 85.327 18.731 87.799 1.00 63.15 C
ATOM 24 P U A 38 86.911 24.613 86.547 1.00 73.00 P
ATOM 25 OP1 U A 38 86.795 25.720 85.565 1.00 73.96 O
ATOM 26 OP2 U A 38 87.767 23.433 86.230 1.00 73.10 O
ATOM 27 O5' U A 38 87.446 25.242 87.903 1.00 73.07 O
TER

ATOM 1 O3' A B 43 80.748 19.049 99.331 1.00 72.69 O
ATOM 2 P A B 44 79.643 18.633 98.240 1.00 74.36 P
ATOM 3 OP1 A B 44 78.401 18.342 98.998 1.00 74.68 O
ATOM 4 OP2 A B 44 80.200 17.600 97.315 1.00 73.60 O
ATOM 5 O5' A B 44 79.408 19.963 97.400 1.00 73.80 O
ATOM 6 C5' A B 44 79.063 21.206 98.041 1.00 72.05 C
ATOM 7 C4' A B 44 79.319 22.357 97.094 1.00 71.02 C
ATOM 8 O4' A B 44 80.746 22.482 96.845 1.00 70.34 O
ATOM 9 C3' A B 44 78.715 22.177 95.712 1.00 70.02 C
ATOM 10 O3' A B 44 77.343 22.551 95.707 1.00 67.84 O
ATOM 11 C2' A B 44 79.591 23.079 94.851 1.00 69.70 C
ATOM 12 O2' A B 44 79.240 24.445 94.947 1.00 70.27 O
ATOM 13 C1' A B 44 80.964 22.871 95.498 1.00 69.41 C
ATOM 14 N9 A B 44 81.783 21.850 94.841 1.00 68.99 N
ATOM 15 C8 A B 44 82.068 20.576 95.267 1.00 69.09 C
ATOM 16 N7 A B 44 82.829 19.899 94.439 1.00 69.13 N
ATOM 17 C5 A B 44 83.062 20.786 93.399 1.00 69.44 C
ATOM 18 C6 A B 44 83.793 20.673 92.198 1.00 69.85 C
ATOM 19 N6 A B 44 84.445 19.569 91.822 1.00 69.15 N
ATOM 20 N1 A B 44 83.825 21.748 91.382 1.00 69.72 N
ATOM 21 C2 A B 44 83.165 22.852 91.749 1.00 69.12 C
ATOM 22 N3 A B 44 82.440 23.078 92.843 1.00 68.97 N
ATOM 23 C4 A B 44 82.428 21.993 93.636 1.00 69.33 C
ATOM 24 P C B 45 76.290 21.717 94.825 1.00 67.27 P
ATOM 25 OP1 C B 45 74.973 22.404 95.003 1.00 67.38 O
ATOM 26 OP2 C B 45 76.414 20.271 95.141 1.00 66.43 O
ATOM 27 O5' C B 45 76.787 21.924 93.324 1.00 64.81 O
TER

Atoms:
OP1: (84.185,23.395,81.730)
OP2: (85.029,20.962,81.703)
C3': (85.029,22.784,86.628)
C1': (83.986,20.823,87.397)
C5': (83.489,22.994,84.587)
O4': (83.239,21.330,86.302)
C8: (84.984,19.197,85.682)
O2': (84.176,22.640,88.912)
C6: (86.562,16.710,87.606)
C5: (85.892,17.774,86.976)
C4: (85.327,18.731,87.799)
P: (84.110,22.006,82.248)
C4': (83.626,22.706,86.054)
C2': (84.880,21.955,87.895)
C2: (86.005,17.704,89.620)
N1: (86.602,16.706,88.957)
N3: (85.346,18.756,89.144)
N6: (87.154,15.710,86.945)
N7: (85.668,18.079,85.639)
N9: (84.733,19.643,86.960)
O5': (84.280,22.080,83.825)
O3': (85.418,24.123,86.905)
OP1: (78.401,18.342,98.998)
OP2: (80.200,17.600,97.315)
C3': (78.715,22.177,95.712)
C1': (80.964,22.871,95.498)
C5': (79.063,21.206,98.041)
O4': (80.746,22.482,96.845)
C8: (82.068,20.576,95.267)
O2': (79.240,24.445,94.947)
C6: (83.793,20.673,92.198)
C5: (83.062,20.786,93.399)
C4: (82.428,21.993,93.636)
P: (79.643,18.633,98.240)
C4': (79.319,22.357,97.094)
C2': (79.591,23.079,94.851)
C2: (83.165,22.852,91.749)
N1: (83.825,21.748,91.382)
N3: (82.440,23.078,92.843)
N6: (84.445,19.569,91.822)
N7: (82.829,19.899,94.439)
N9: (81.783,21.850,94.841)
O5': (79.408,19.963,97.400)
O3': (77.343,22.551,95.707)
Image (generated by PyMOL):
PyMOL image
show in jmol