Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VTQ:A20:A13
Extra
PDB:
ATOM 1 O3' C A 19 -0.168 16.919 5.606 1.00 1.00 O
ATOM 2 P A A 20 1.176 16.035 5.412 1.00 1.00 P
ATOM 3 OP1 A A 20 0.869 14.715 4.769 1.00 1.00 O
ATOM 4 OP2 A A 20 1.647 15.865 6.817 1.00 1.00 O
ATOM 5 O5' A A 20 2.105 16.966 4.530 1.00 1.00 O
ATOM 6 C5' A A 20 3.088 17.857 5.113 1.00 1.00 C
ATOM 7 C4' A A 20 4.360 17.633 4.321 1.00 1.00 C
ATOM 8 O4' A A 20 5.247 16.796 5.023 1.00 1.00 O
ATOM 9 C3' A A 20 4.155 16.864 3.005 1.00 1.00 C
ATOM 10 O3' A A 20 3.619 17.694 1.988 1.00 1.00 O
ATOM 11 C2' A A 20 5.584 16.368 2.721 1.00 1.00 C
ATOM 12 O2' A A 20 6.320 17.469 2.213 1.00 1.00 O
ATOM 13 C1' A A 20 6.018 16.001 4.111 1.00 1.00 C
ATOM 14 N9 A A 20 5.765 14.593 4.455 1.00 1.00 N
ATOM 15 C8 A A 20 4.577 14.049 4.889 1.00 1.00 C
ATOM 16 N7 A A 20 4.632 12.764 5.128 1.00 1.00 N
ATOM 17 C5 A A 20 5.952 12.437 4.829 1.00 1.00 C
ATOM 18 C6 A A 20 6.645 11.207 4.889 1.00 1.00 C
ATOM 19 N6 A A 20 6.097 10.057 5.262 1.00 1.00 N
ATOM 20 N1 A A 20 7.954 11.261 4.530 1.00 1.00 N
ATOM 21 C2 A A 20 8.533 12.424 4.141 1.00 1.00 C
ATOM 22 N3 A A 20 7.948 13.621 4.051 1.00 1.00 N
ATOM 23 C4 A A 20 6.652 13.553 4.425 1.00 1.00 C
ATOM 24 P G A 21 3.637 17.442 0.404 1.00 1.00 P
ATOM 25 OP1 G A 21 2.382 17.979 -0.209 1.00 1.00 O
ATOM 26 OP2 G A 21 3.649 15.953 0.299 1.00 1.00 O
ATOM 27 O5' G A 21 4.933 18.176 -0.120 1.00 1.00 O
TER
ATOM 1 P A B 13 18.633 14.933 -0.897 1.00 1.00 P
ATOM 2 OP1 A B 13 19.972 15.620 -0.792 1.00 1.00 O
ATOM 3 OP2 A B 13 18.320 14.035 0.254 1.00 1.00 O
ATOM 4 O5' A B 13 17.499 16.034 -1.151 1.00 1.00 O
ATOM 5 C5' A B 13 17.337 16.980 -0.060 1.00 1.00 C
ATOM 6 C4' A B 13 16.119 17.816 -0.344 1.00 1.00 C
ATOM 7 O4' A B 13 15.057 17.020 -0.852 1.00 1.00 O
ATOM 8 C3' A B 13 15.498 18.462 0.912 1.00 1.00 C
ATOM 9 O3' A B 13 16.263 19.570 1.360 1.00 1.00 O
ATOM 10 C2' A B 13 14.087 18.788 0.404 1.00 1.00 C
ATOM 11 O2' A B 13 14.195 19.965 -0.389 1.00 1.00 O
ATOM 12 C1' A B 13 13.803 17.558 -0.434 1.00 1.00 C
ATOM 13 N9 A B 13 13.098 16.551 0.359 1.00 1.00 N
ATOM 14 C8 A B 13 13.598 15.307 0.688 1.00 1.00 C
ATOM 15 N7 A B 13 12.778 14.586 1.405 1.00 1.00 N
ATOM 16 C5 A B 13 11.675 15.409 1.570 1.00 1.00 C
ATOM 17 C6 A B 13 10.450 15.205 2.257 1.00 1.00 C
ATOM 18 N6 A B 13 10.167 14.090 2.900 1.00 1.00 N
ATOM 19 N1 A B 13 9.582 16.245 2.198 1.00 1.00 N
ATOM 20 C2 A B 13 9.884 17.388 1.525 1.00 1.00 C
ATOM 21 N3 A B 13 11.011 17.653 0.867 1.00 1.00 N
ATOM 22 C4 A B 13 11.861 16.619 0.927 1.00 1.00 C
ATOM 23 P A B 14 17.391 19.353 2.497 1.00 1.00 P
ATOM 24 OP1 A B 14 18.609 20.189 2.272 1.00 1.00 O
ATOM 25 OP2 A B 14 17.711 17.898 2.407 1.00 1.00 O
ATOM 26 O5' A B 14 16.571 19.761 3.812 1.00 1.00 O
TER
ATOM 2 P A A 20 1.176 16.035 5.412 1.00 1.00 P
ATOM 3 OP1 A A 20 0.869 14.715 4.769 1.00 1.00 O
ATOM 4 OP2 A A 20 1.647 15.865 6.817 1.00 1.00 O
ATOM 5 O5' A A 20 2.105 16.966 4.530 1.00 1.00 O
ATOM 6 C5' A A 20 3.088 17.857 5.113 1.00 1.00 C
ATOM 7 C4' A A 20 4.360 17.633 4.321 1.00 1.00 C
ATOM 8 O4' A A 20 5.247 16.796 5.023 1.00 1.00 O
ATOM 9 C3' A A 20 4.155 16.864 3.005 1.00 1.00 C
ATOM 10 O3' A A 20 3.619 17.694 1.988 1.00 1.00 O
ATOM 11 C2' A A 20 5.584 16.368 2.721 1.00 1.00 C
ATOM 12 O2' A A 20 6.320 17.469 2.213 1.00 1.00 O
ATOM 13 C1' A A 20 6.018 16.001 4.111 1.00 1.00 C
ATOM 14 N9 A A 20 5.765 14.593 4.455 1.00 1.00 N
ATOM 15 C8 A A 20 4.577 14.049 4.889 1.00 1.00 C
ATOM 16 N7 A A 20 4.632 12.764 5.128 1.00 1.00 N
ATOM 17 C5 A A 20 5.952 12.437 4.829 1.00 1.00 C
ATOM 18 C6 A A 20 6.645 11.207 4.889 1.00 1.00 C
ATOM 19 N6 A A 20 6.097 10.057 5.262 1.00 1.00 N
ATOM 20 N1 A A 20 7.954 11.261 4.530 1.00 1.00 N
ATOM 21 C2 A A 20 8.533 12.424 4.141 1.00 1.00 C
ATOM 22 N3 A A 20 7.948 13.621 4.051 1.00 1.00 N
ATOM 23 C4 A A 20 6.652 13.553 4.425 1.00 1.00 C
ATOM 24 P G A 21 3.637 17.442 0.404 1.00 1.00 P
ATOM 25 OP1 G A 21 2.382 17.979 -0.209 1.00 1.00 O
ATOM 26 OP2 G A 21 3.649 15.953 0.299 1.00 1.00 O
ATOM 27 O5' G A 21 4.933 18.176 -0.120 1.00 1.00 O
TER
ATOM 1 P A B 13 18.633 14.933 -0.897 1.00 1.00 P
ATOM 2 OP1 A B 13 19.972 15.620 -0.792 1.00 1.00 O
ATOM 3 OP2 A B 13 18.320 14.035 0.254 1.00 1.00 O
ATOM 4 O5' A B 13 17.499 16.034 -1.151 1.00 1.00 O
ATOM 5 C5' A B 13 17.337 16.980 -0.060 1.00 1.00 C
ATOM 6 C4' A B 13 16.119 17.816 -0.344 1.00 1.00 C
ATOM 7 O4' A B 13 15.057 17.020 -0.852 1.00 1.00 O
ATOM 8 C3' A B 13 15.498 18.462 0.912 1.00 1.00 C
ATOM 9 O3' A B 13 16.263 19.570 1.360 1.00 1.00 O
ATOM 10 C2' A B 13 14.087 18.788 0.404 1.00 1.00 C
ATOM 11 O2' A B 13 14.195 19.965 -0.389 1.00 1.00 O
ATOM 12 C1' A B 13 13.803 17.558 -0.434 1.00 1.00 C
ATOM 13 N9 A B 13 13.098 16.551 0.359 1.00 1.00 N
ATOM 14 C8 A B 13 13.598 15.307 0.688 1.00 1.00 C
ATOM 15 N7 A B 13 12.778 14.586 1.405 1.00 1.00 N
ATOM 16 C5 A B 13 11.675 15.409 1.570 1.00 1.00 C
ATOM 17 C6 A B 13 10.450 15.205 2.257 1.00 1.00 C
ATOM 18 N6 A B 13 10.167 14.090 2.900 1.00 1.00 N
ATOM 19 N1 A B 13 9.582 16.245 2.198 1.00 1.00 N
ATOM 20 C2 A B 13 9.884 17.388 1.525 1.00 1.00 C
ATOM 21 N3 A B 13 11.011 17.653 0.867 1.00 1.00 N
ATOM 22 C4 A B 13 11.861 16.619 0.927 1.00 1.00 C
ATOM 23 P A B 14 17.391 19.353 2.497 1.00 1.00 P
ATOM 24 OP1 A B 14 18.609 20.189 2.272 1.00 1.00 O
ATOM 25 OP2 A B 14 17.711 17.898 2.407 1.00 1.00 O
ATOM 26 O5' A B 14 16.571 19.761 3.812 1.00 1.00 O
TER
Atoms:
OP1: (0.869,14.715,4.769)
OP2: (1.647,15.865,6.817)
C3': (4.155,16.864,3.005)
C1': (6.018,16.001,4.111)
C5': (3.088,17.857,5.113)
O4': (5.247,16.796,5.023)
C8: (4.577,14.049,4.889)
O2': (6.320,17.469,2.213)
C6: (6.645,11.207,4.889)
C5: (5.952,12.437,4.829)
C4: (6.652,13.553,4.425)
P: (1.176,16.035,5.412)
C4': (4.360,17.633,4.321)
C2': (5.584,16.368,2.721)
C2: (8.533,12.424,4.141)
N1: (7.954,11.261,4.530)
N3: (7.948,13.621,4.051)
N6: (6.097,10.057,5.262)
N7: (4.632,12.764,5.128)
N9: (5.765,14.593,4.455)
O5': (2.105,16.966,4.530)
O3': (3.619,17.694,1.988)
OP2: (1.647,15.865,6.817)
C3': (4.155,16.864,3.005)
C1': (6.018,16.001,4.111)
C5': (3.088,17.857,5.113)
O4': (5.247,16.796,5.023)
C8: (4.577,14.049,4.889)
O2': (6.320,17.469,2.213)
C6: (6.645,11.207,4.889)
C5: (5.952,12.437,4.829)
C4: (6.652,13.553,4.425)
P: (1.176,16.035,5.412)
C4': (4.360,17.633,4.321)
C2': (5.584,16.368,2.721)
C2: (8.533,12.424,4.141)
N1: (7.954,11.261,4.530)
N3: (7.948,13.621,4.051)
N6: (6.097,10.057,5.262)
N7: (4.632,12.764,5.128)
N9: (5.765,14.593,4.455)
O5': (2.105,16.966,4.530)
O3': (3.619,17.694,1.988)
OP1: (19.972,15.620,-0.792)
OP2: (18.320,14.035,0.254)
C3': (15.498,18.462,0.912)
C1': (13.803,17.558,-0.434)
C5': (17.337,16.980,-0.060)
O4': (15.057,17.020,-0.852)
C8: (13.598,15.307,0.688)
O2': (14.195,19.965,-0.389)
C6: (10.450,15.205,2.257)
C5: (11.675,15.409,1.570)
C4: (11.861,16.619,0.927)
P: (18.633,14.933,-0.897)
C4': (16.119,17.816,-0.344)
C2': (14.087,18.788,0.404)
C2: (9.884,17.388,1.525)
N1: (9.582,16.245,2.198)
N3: (11.011,17.653,0.867)
N6: (10.167,14.090,2.900)
N7: (12.778,14.586,1.405)
N9: (13.098,16.551,0.359)
O5': (17.499,16.034,-1.151)
O3': (16.263,19.570,1.360)
OP2: (18.320,14.035,0.254)
C3': (15.498,18.462,0.912)
C1': (13.803,17.558,-0.434)
C5': (17.337,16.980,-0.060)
O4': (15.057,17.020,-0.852)
C8: (13.598,15.307,0.688)
O2': (14.195,19.965,-0.389)
C6: (10.450,15.205,2.257)
C5: (11.675,15.409,1.570)
C4: (11.861,16.619,0.927)
P: (18.633,14.933,-0.897)
C4': (16.119,17.816,-0.344)
C2': (14.087,18.788,0.404)
C2: (9.884,17.388,1.525)
N1: (9.582,16.245,2.198)
N3: (11.011,17.653,0.867)
N6: (10.167,14.090,2.900)
N7: (12.778,14.586,1.405)
N9: (13.098,16.551,0.359)
O5': (17.499,16.034,-1.151)
O3': (16.263,19.570,1.360)
Image (generated by PyMOL):