Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:937:944
Extra
PDB:
ATOM 1 O3' C A 36 82.608 22.588 82.253 1.00 67.50 O
ATOM 2 P A A 37 84.122 23.078 82.484 1.00 68.30 P
ATOM 3 OP1 A A 37 84.230 24.463 81.967 1.00 70.23 O
ATOM 4 OP2 A A 37 85.045 22.031 81.968 1.00 70.06 O
ATOM 5 O5' A A 37 84.255 23.155 84.065 1.00 67.37 O
ATOM 6 C5' A A 37 83.390 24.015 84.821 1.00 67.52 C
ATOM 7 C4' A A 37 83.593 23.795 86.295 1.00 68.48 C
ATOM 8 O4' A A 37 83.205 22.444 86.649 1.00 69.37 O
ATOM 9 C3' A A 37 85.026 23.901 86.780 1.00 68.74 C
ATOM 10 O3' A A 37 85.381 25.255 86.984 1.00 69.37 O
ATOM 11 C2' A A 37 84.977 23.120 88.083 1.00 69.11 C
ATOM 12 O2' A A 37 84.397 23.866 89.133 1.00 69.87 O
ATOM 13 C1' A A 37 84.030 21.979 87.707 1.00 69.55 C
ATOM 14 N9 A A 37 84.730 20.778 87.253 1.00 70.08 N
ATOM 15 C8 A A 37 84.872 20.306 85.969 1.00 70.71 C
ATOM 16 N7 A A 37 85.555 19.191 85.889 1.00 71.73 N
ATOM 17 C5 A A 37 85.888 18.911 87.208 1.00 72.33 C
ATOM 18 C6 A A 37 86.611 17.862 87.796 1.00 73.32 C
ATOM 19 N6 A A 37 87.154 16.859 87.097 1.00 73.87 N
ATOM 20 N1 A A 37 86.760 17.877 89.142 1.00 73.19 N
ATOM 21 C2 A A 37 86.215 18.885 89.836 1.00 72.23 C
ATOM 22 N3 A A 37 85.518 19.929 89.396 1.00 71.53 N
ATOM 23 C4 A A 37 85.387 19.881 88.057 1.00 71.40 C
ATOM 24 P U A 38 86.872 25.747 86.665 1.00 71.40 P
ATOM 25 OP1 U A 38 86.734 26.956 85.812 1.00 72.16 O
ATOM 26 OP2 U A 38 87.690 24.601 86.187 1.00 71.51 O
ATOM 27 O5' U A 38 87.413 26.209 88.086 1.00 71.60 O
TER
ATOM 1 O3' A B 43 80.774 20.249 99.650 1.00 69.58 O
ATOM 2 P A B 44 79.647 19.981 98.541 1.00 69.57 P
ATOM 3 OP1 A B 44 78.355 19.862 99.264 1.00 69.75 O
ATOM 4 OP2 A B 44 80.092 18.884 97.640 1.00 67.47 O
ATOM 5 O5' A B 44 79.629 21.336 97.702 1.00 70.85 O
ATOM 6 C5' A B 44 79.211 22.583 98.307 1.00 68.83 C
ATOM 7 C4' A B 44 79.320 23.709 97.306 1.00 66.89 C
ATOM 8 O4' A B 44 80.717 23.963 97.012 1.00 66.86 O
ATOM 9 C3' A B 44 78.693 23.422 95.952 1.00 66.08 C
ATOM 10 O3' A B 44 77.294 23.680 95.960 1.00 64.12 O
ATOM 11 C2' A B 44 79.456 24.363 95.031 1.00 66.19 C
ATOM 12 O2' A B 44 78.973 25.688 95.087 1.00 67.67 O
ATOM 13 C1' A B 44 80.861 24.302 95.641 1.00 66.83 C
ATOM 14 N9 A B 44 81.718 23.299 95.006 1.00 66.58 N
ATOM 15 C8 A B 44 82.079 22.063 95.482 1.00 65.95 C
ATOM 16 N7 A B 44 82.851 21.388 94.667 1.00 66.05 N
ATOM 17 C5 A B 44 83.013 22.238 93.582 1.00 66.44 C
ATOM 18 C6 A B 44 83.718 22.106 92.376 1.00 66.53 C
ATOM 19 N6 A B 44 84.428 21.027 92.045 1.00 67.31 N
ATOM 20 N1 A B 44 83.669 23.135 91.507 1.00 66.86 N
ATOM 21 C2 A B 44 82.962 24.219 91.835 1.00 67.21 C
ATOM 22 N3 A B 44 82.258 24.463 92.936 1.00 67.24 N
ATOM 23 C4 A B 44 82.324 23.419 93.779 1.00 66.68 C
ATOM 24 P C B 45 76.311 22.774 95.072 1.00 62.87 P
ATOM 25 OP1 C B 45 74.953 23.356 95.245 1.00 62.54 O
ATOM 26 OP2 C B 45 76.545 21.347 95.400 1.00 62.67 O
ATOM 27 O5' C B 45 76.798 23.017 93.573 1.00 62.45 O
TER
ATOM 2 P A A 37 84.122 23.078 82.484 1.00 68.30 P
ATOM 3 OP1 A A 37 84.230 24.463 81.967 1.00 70.23 O
ATOM 4 OP2 A A 37 85.045 22.031 81.968 1.00 70.06 O
ATOM 5 O5' A A 37 84.255 23.155 84.065 1.00 67.37 O
ATOM 6 C5' A A 37 83.390 24.015 84.821 1.00 67.52 C
ATOM 7 C4' A A 37 83.593 23.795 86.295 1.00 68.48 C
ATOM 8 O4' A A 37 83.205 22.444 86.649 1.00 69.37 O
ATOM 9 C3' A A 37 85.026 23.901 86.780 1.00 68.74 C
ATOM 10 O3' A A 37 85.381 25.255 86.984 1.00 69.37 O
ATOM 11 C2' A A 37 84.977 23.120 88.083 1.00 69.11 C
ATOM 12 O2' A A 37 84.397 23.866 89.133 1.00 69.87 O
ATOM 13 C1' A A 37 84.030 21.979 87.707 1.00 69.55 C
ATOM 14 N9 A A 37 84.730 20.778 87.253 1.00 70.08 N
ATOM 15 C8 A A 37 84.872 20.306 85.969 1.00 70.71 C
ATOM 16 N7 A A 37 85.555 19.191 85.889 1.00 71.73 N
ATOM 17 C5 A A 37 85.888 18.911 87.208 1.00 72.33 C
ATOM 18 C6 A A 37 86.611 17.862 87.796 1.00 73.32 C
ATOM 19 N6 A A 37 87.154 16.859 87.097 1.00 73.87 N
ATOM 20 N1 A A 37 86.760 17.877 89.142 1.00 73.19 N
ATOM 21 C2 A A 37 86.215 18.885 89.836 1.00 72.23 C
ATOM 22 N3 A A 37 85.518 19.929 89.396 1.00 71.53 N
ATOM 23 C4 A A 37 85.387 19.881 88.057 1.00 71.40 C
ATOM 24 P U A 38 86.872 25.747 86.665 1.00 71.40 P
ATOM 25 OP1 U A 38 86.734 26.956 85.812 1.00 72.16 O
ATOM 26 OP2 U A 38 87.690 24.601 86.187 1.00 71.51 O
ATOM 27 O5' U A 38 87.413 26.209 88.086 1.00 71.60 O
TER
ATOM 1 O3' A B 43 80.774 20.249 99.650 1.00 69.58 O
ATOM 2 P A B 44 79.647 19.981 98.541 1.00 69.57 P
ATOM 3 OP1 A B 44 78.355 19.862 99.264 1.00 69.75 O
ATOM 4 OP2 A B 44 80.092 18.884 97.640 1.00 67.47 O
ATOM 5 O5' A B 44 79.629 21.336 97.702 1.00 70.85 O
ATOM 6 C5' A B 44 79.211 22.583 98.307 1.00 68.83 C
ATOM 7 C4' A B 44 79.320 23.709 97.306 1.00 66.89 C
ATOM 8 O4' A B 44 80.717 23.963 97.012 1.00 66.86 O
ATOM 9 C3' A B 44 78.693 23.422 95.952 1.00 66.08 C
ATOM 10 O3' A B 44 77.294 23.680 95.960 1.00 64.12 O
ATOM 11 C2' A B 44 79.456 24.363 95.031 1.00 66.19 C
ATOM 12 O2' A B 44 78.973 25.688 95.087 1.00 67.67 O
ATOM 13 C1' A B 44 80.861 24.302 95.641 1.00 66.83 C
ATOM 14 N9 A B 44 81.718 23.299 95.006 1.00 66.58 N
ATOM 15 C8 A B 44 82.079 22.063 95.482 1.00 65.95 C
ATOM 16 N7 A B 44 82.851 21.388 94.667 1.00 66.05 N
ATOM 17 C5 A B 44 83.013 22.238 93.582 1.00 66.44 C
ATOM 18 C6 A B 44 83.718 22.106 92.376 1.00 66.53 C
ATOM 19 N6 A B 44 84.428 21.027 92.045 1.00 67.31 N
ATOM 20 N1 A B 44 83.669 23.135 91.507 1.00 66.86 N
ATOM 21 C2 A B 44 82.962 24.219 91.835 1.00 67.21 C
ATOM 22 N3 A B 44 82.258 24.463 92.936 1.00 67.24 N
ATOM 23 C4 A B 44 82.324 23.419 93.779 1.00 66.68 C
ATOM 24 P C B 45 76.311 22.774 95.072 1.00 62.87 P
ATOM 25 OP1 C B 45 74.953 23.356 95.245 1.00 62.54 O
ATOM 26 OP2 C B 45 76.545 21.347 95.400 1.00 62.67 O
ATOM 27 O5' C B 45 76.798 23.017 93.573 1.00 62.45 O
TER
Atoms:
OP1: (84.230,24.463,81.967)
OP2: (85.045,22.031,81.968)
C3': (85.026,23.901,86.780)
C1': (84.030,21.979,87.707)
C5': (83.390,24.015,84.821)
O4': (83.205,22.444,86.649)
C8: (84.872,20.306,85.969)
O2': (84.397,23.866,89.133)
C6: (86.611,17.862,87.796)
C5: (85.888,18.911,87.208)
C4: (85.387,19.881,88.057)
P: (84.122,23.078,82.484)
C4': (83.593,23.795,86.295)
C2': (84.977,23.120,88.083)
C2: (86.215,18.885,89.836)
N1: (86.760,17.877,89.142)
N3: (85.518,19.929,89.396)
N6: (87.154,16.859,87.097)
N7: (85.555,19.191,85.889)
N9: (84.730,20.778,87.253)
O5': (84.255,23.155,84.065)
O3': (85.381,25.255,86.984)
OP2: (85.045,22.031,81.968)
C3': (85.026,23.901,86.780)
C1': (84.030,21.979,87.707)
C5': (83.390,24.015,84.821)
O4': (83.205,22.444,86.649)
C8: (84.872,20.306,85.969)
O2': (84.397,23.866,89.133)
C6: (86.611,17.862,87.796)
C5: (85.888,18.911,87.208)
C4: (85.387,19.881,88.057)
P: (84.122,23.078,82.484)
C4': (83.593,23.795,86.295)
C2': (84.977,23.120,88.083)
C2: (86.215,18.885,89.836)
N1: (86.760,17.877,89.142)
N3: (85.518,19.929,89.396)
N6: (87.154,16.859,87.097)
N7: (85.555,19.191,85.889)
N9: (84.730,20.778,87.253)
O5': (84.255,23.155,84.065)
O3': (85.381,25.255,86.984)
OP1: (78.355,19.862,99.264)
OP2: (80.092,18.884,97.640)
C3': (78.693,23.422,95.952)
C1': (80.861,24.302,95.641)
C5': (79.211,22.583,98.307)
O4': (80.717,23.963,97.012)
C8: (82.079,22.063,95.482)
O2': (78.973,25.688,95.087)
C6: (83.718,22.106,92.376)
C5: (83.013,22.238,93.582)
C4: (82.324,23.419,93.779)
P: (79.647,19.981,98.541)
C4': (79.320,23.709,97.306)
C2': (79.456,24.363,95.031)
C2: (82.962,24.219,91.835)
N1: (83.669,23.135,91.507)
N3: (82.258,24.463,92.936)
N6: (84.428,21.027,92.045)
N7: (82.851,21.388,94.667)
N9: (81.718,23.299,95.006)
O5': (79.629,21.336,97.702)
O3': (77.294,23.680,95.960)
OP2: (80.092,18.884,97.640)
C3': (78.693,23.422,95.952)
C1': (80.861,24.302,95.641)
C5': (79.211,22.583,98.307)
O4': (80.717,23.963,97.012)
C8: (82.079,22.063,95.482)
O2': (78.973,25.688,95.087)
C6: (83.718,22.106,92.376)
C5: (83.013,22.238,93.582)
C4: (82.324,23.419,93.779)
P: (79.647,19.981,98.541)
C4': (79.320,23.709,97.306)
C2': (79.456,24.363,95.031)
C2: (82.962,24.219,91.835)
N1: (83.669,23.135,91.507)
N3: (82.258,24.463,92.936)
N6: (84.428,21.027,92.045)
N7: (82.851,21.388,94.667)
N9: (81.718,23.299,95.006)
O5': (79.629,21.336,97.702)
O3': (77.294,23.680,95.960)
Image (generated by PyMOL):