Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02417:02639
Extra
PDB:
ATOM 1 O3' C A2416 53.384 117.021 143.213 1.00 45.29 O
ATOM 2 P A A2417 53.413 117.389 141.648 1.00 46.80 P
ATOM 3 OP1 A A2417 52.000 117.379 141.194 1.00 46.38 O
ATOM 4 OP2 A A2417 54.409 116.527 140.957 1.00 45.44 O
ATOM 5 O5' A A2417 53.970 118.880 141.629 1.00 44.47 O
ATOM 6 C5' A A2417 53.224 119.944 142.229 1.00 46.54 C
ATOM 7 C4' A A2417 54.058 121.194 142.284 1.00 48.30 C
ATOM 8 O4' A A2417 55.225 120.947 143.107 1.00 49.40 O
ATOM 9 C3' A A2417 54.641 121.670 140.967 1.00 49.36 C
ATOM 10 O3' A A2417 53.667 122.396 140.209 1.00 50.91 O
ATOM 11 C2' A A2417 55.807 122.532 141.442 1.00 48.67 C
ATOM 12 O2' A A2417 55.385 123.795 141.914 1.00 48.44 O
ATOM 13 C1' A A2417 56.313 121.723 142.640 1.00 48.09 C
ATOM 14 N9 A A2417 57.423 120.818 142.335 1.00 47.29 N
ATOM 15 C8 A A2417 57.356 119.496 141.966 1.00 45.91 C
ATOM 16 N7 A A2417 58.525 118.950 141.740 1.00 44.65 N
ATOM 17 C5 A A2417 59.426 119.979 141.978 1.00 45.44 C
ATOM 18 C6 A A2417 60.833 120.045 141.898 1.00 45.87 C
ATOM 19 N6 A A2417 61.603 119.013 141.530 1.00 46.54 N
ATOM 20 N1 A A2417 61.426 121.220 142.206 1.00 44.89 N
ATOM 21 C2 A A2417 60.652 122.253 142.562 1.00 45.95 C
ATOM 22 N3 A A2417 59.322 122.317 142.667 1.00 46.50 N
ATOM 23 C4 A A2417 58.763 121.133 142.355 1.00 46.30 C
ATOM 24 P A A2418 53.736 122.396 138.597 1.00 51.18 P
ATOM 25 OP1 A A2418 52.583 123.180 138.090 1.00 50.27 O
ATOM 26 OP2 A A2418 53.934 121.007 138.135 1.00 50.17 O
ATOM 27 O5' A A2418 55.058 123.218 138.265 1.00 49.32 O
TER
ATOM 1 O3' A B2638 54.912 128.499 149.245 1.00 58.88 O
ATOM 2 P A B2639 54.120 129.853 149.602 1.00 58.78 P
ATOM 3 OP1 A B2639 54.751 130.426 150.827 1.00 57.24 O
ATOM 4 OP2 A B2639 52.649 129.569 149.586 1.00 55.46 O
ATOM 5 O5' A B2639 54.470 130.820 148.392 1.00 55.39 O
ATOM 6 C5' A B2639 54.390 130.379 147.026 1.00 54.85 C
ATOM 7 C4' A B2639 55.463 131.057 146.215 1.00 53.51 C
ATOM 8 O4' A B2639 56.712 130.348 146.401 1.00 53.11 O
ATOM 9 C3' A B2639 55.314 130.991 144.712 1.00 53.94 C
ATOM 10 O3' A B2639 54.385 131.970 144.259 1.00 55.43 O
ATOM 11 C2' A B2639 56.725 131.350 144.262 1.00 53.25 C
ATOM 12 O2' A B2639 56.949 132.733 144.379 1.00 56.94 O
ATOM 13 C1' A B2639 57.576 130.670 145.335 1.00 51.55 C
ATOM 14 N9 A B2639 58.293 129.468 144.911 1.00 50.68 N
ATOM 15 C8 A B2639 59.656 129.353 144.773 1.00 53.02 C
ATOM 16 N7 A B2639 60.056 128.169 144.372 1.00 52.33 N
ATOM 17 C5 A B2639 58.877 127.454 144.236 1.00 52.51 C
ATOM 18 C6 A B2639 58.625 126.136 143.843 1.00 52.44 C
ATOM 19 N6 A B2639 59.586 125.268 143.513 1.00 51.36 N
ATOM 20 N1 A B2639 57.338 125.730 143.805 1.00 52.36 N
ATOM 21 C2 A B2639 56.381 126.600 144.153 1.00 51.39 C
ATOM 22 N3 A B2639 56.494 127.866 144.547 1.00 51.27 N
ATOM 23 C4 A B2639 57.782 128.240 144.566 1.00 51.27 C
ATOM 24 P A B2640 52.906 131.525 143.789 1.00 59.52 P
ATOM 25 OP1 A B2640 52.553 132.373 142.617 1.00 60.03 O
ATOM 26 OP2 A B2640 51.995 131.489 144.973 1.00 58.14 O
ATOM 27 O5' A B2640 53.061 130.016 143.291 1.00 60.17 O
TER
ATOM 2 P A A2417 53.413 117.389 141.648 1.00 46.80 P
ATOM 3 OP1 A A2417 52.000 117.379 141.194 1.00 46.38 O
ATOM 4 OP2 A A2417 54.409 116.527 140.957 1.00 45.44 O
ATOM 5 O5' A A2417 53.970 118.880 141.629 1.00 44.47 O
ATOM 6 C5' A A2417 53.224 119.944 142.229 1.00 46.54 C
ATOM 7 C4' A A2417 54.058 121.194 142.284 1.00 48.30 C
ATOM 8 O4' A A2417 55.225 120.947 143.107 1.00 49.40 O
ATOM 9 C3' A A2417 54.641 121.670 140.967 1.00 49.36 C
ATOM 10 O3' A A2417 53.667 122.396 140.209 1.00 50.91 O
ATOM 11 C2' A A2417 55.807 122.532 141.442 1.00 48.67 C
ATOM 12 O2' A A2417 55.385 123.795 141.914 1.00 48.44 O
ATOM 13 C1' A A2417 56.313 121.723 142.640 1.00 48.09 C
ATOM 14 N9 A A2417 57.423 120.818 142.335 1.00 47.29 N
ATOM 15 C8 A A2417 57.356 119.496 141.966 1.00 45.91 C
ATOM 16 N7 A A2417 58.525 118.950 141.740 1.00 44.65 N
ATOM 17 C5 A A2417 59.426 119.979 141.978 1.00 45.44 C
ATOM 18 C6 A A2417 60.833 120.045 141.898 1.00 45.87 C
ATOM 19 N6 A A2417 61.603 119.013 141.530 1.00 46.54 N
ATOM 20 N1 A A2417 61.426 121.220 142.206 1.00 44.89 N
ATOM 21 C2 A A2417 60.652 122.253 142.562 1.00 45.95 C
ATOM 22 N3 A A2417 59.322 122.317 142.667 1.00 46.50 N
ATOM 23 C4 A A2417 58.763 121.133 142.355 1.00 46.30 C
ATOM 24 P A A2418 53.736 122.396 138.597 1.00 51.18 P
ATOM 25 OP1 A A2418 52.583 123.180 138.090 1.00 50.27 O
ATOM 26 OP2 A A2418 53.934 121.007 138.135 1.00 50.17 O
ATOM 27 O5' A A2418 55.058 123.218 138.265 1.00 49.32 O
TER
ATOM 1 O3' A B2638 54.912 128.499 149.245 1.00 58.88 O
ATOM 2 P A B2639 54.120 129.853 149.602 1.00 58.78 P
ATOM 3 OP1 A B2639 54.751 130.426 150.827 1.00 57.24 O
ATOM 4 OP2 A B2639 52.649 129.569 149.586 1.00 55.46 O
ATOM 5 O5' A B2639 54.470 130.820 148.392 1.00 55.39 O
ATOM 6 C5' A B2639 54.390 130.379 147.026 1.00 54.85 C
ATOM 7 C4' A B2639 55.463 131.057 146.215 1.00 53.51 C
ATOM 8 O4' A B2639 56.712 130.348 146.401 1.00 53.11 O
ATOM 9 C3' A B2639 55.314 130.991 144.712 1.00 53.94 C
ATOM 10 O3' A B2639 54.385 131.970 144.259 1.00 55.43 O
ATOM 11 C2' A B2639 56.725 131.350 144.262 1.00 53.25 C
ATOM 12 O2' A B2639 56.949 132.733 144.379 1.00 56.94 O
ATOM 13 C1' A B2639 57.576 130.670 145.335 1.00 51.55 C
ATOM 14 N9 A B2639 58.293 129.468 144.911 1.00 50.68 N
ATOM 15 C8 A B2639 59.656 129.353 144.773 1.00 53.02 C
ATOM 16 N7 A B2639 60.056 128.169 144.372 1.00 52.33 N
ATOM 17 C5 A B2639 58.877 127.454 144.236 1.00 52.51 C
ATOM 18 C6 A B2639 58.625 126.136 143.843 1.00 52.44 C
ATOM 19 N6 A B2639 59.586 125.268 143.513 1.00 51.36 N
ATOM 20 N1 A B2639 57.338 125.730 143.805 1.00 52.36 N
ATOM 21 C2 A B2639 56.381 126.600 144.153 1.00 51.39 C
ATOM 22 N3 A B2639 56.494 127.866 144.547 1.00 51.27 N
ATOM 23 C4 A B2639 57.782 128.240 144.566 1.00 51.27 C
ATOM 24 P A B2640 52.906 131.525 143.789 1.00 59.52 P
ATOM 25 OP1 A B2640 52.553 132.373 142.617 1.00 60.03 O
ATOM 26 OP2 A B2640 51.995 131.489 144.973 1.00 58.14 O
ATOM 27 O5' A B2640 53.061 130.016 143.291 1.00 60.17 O
TER
Atoms:
OP1: (52.000,117.379,141.194)
OP2: (54.409,116.527,140.957)
C3': (54.641,121.670,140.967)
C1': (56.313,121.723,142.640)
C5': (53.224,119.944,142.229)
O4': (55.225,120.947,143.107)
C8: (57.356,119.496,141.966)
O2': (55.385,123.795,141.914)
C6: (60.833,120.045,141.898)
C5: (59.426,119.979,141.978)
C4: (58.763,121.133,142.355)
P: (53.413,117.389,141.648)
C4': (54.058,121.194,142.284)
C2': (55.807,122.532,141.442)
C2: (60.652,122.253,142.562)
N1: (61.426,121.220,142.206)
N3: (59.322,122.317,142.667)
N6: (61.603,119.013,141.530)
N7: (58.525,118.950,141.740)
N9: (57.423,120.818,142.335)
O5': (53.970,118.880,141.629)
O3': (53.667,122.396,140.209)
OP2: (54.409,116.527,140.957)
C3': (54.641,121.670,140.967)
C1': (56.313,121.723,142.640)
C5': (53.224,119.944,142.229)
O4': (55.225,120.947,143.107)
C8: (57.356,119.496,141.966)
O2': (55.385,123.795,141.914)
C6: (60.833,120.045,141.898)
C5: (59.426,119.979,141.978)
C4: (58.763,121.133,142.355)
P: (53.413,117.389,141.648)
C4': (54.058,121.194,142.284)
C2': (55.807,122.532,141.442)
C2: (60.652,122.253,142.562)
N1: (61.426,121.220,142.206)
N3: (59.322,122.317,142.667)
N6: (61.603,119.013,141.530)
N7: (58.525,118.950,141.740)
N9: (57.423,120.818,142.335)
O5': (53.970,118.880,141.629)
O3': (53.667,122.396,140.209)
OP1: (54.751,130.426,150.827)
OP2: (52.649,129.569,149.586)
C3': (55.314,130.991,144.712)
C1': (57.576,130.670,145.335)
C5': (54.390,130.379,147.026)
O4': (56.712,130.348,146.401)
C8: (59.656,129.353,144.773)
O2': (56.949,132.733,144.379)
C6: (58.625,126.136,143.843)
C5: (58.877,127.454,144.236)
C4: (57.782,128.240,144.566)
P: (54.120,129.853,149.602)
C4': (55.463,131.057,146.215)
C2': (56.725,131.350,144.262)
C2: (56.381,126.600,144.153)
N1: (57.338,125.730,143.805)
N3: (56.494,127.866,144.547)
N6: (59.586,125.268,143.513)
N7: (60.056,128.169,144.372)
N9: (58.293,129.468,144.911)
O5': (54.470,130.820,148.392)
O3': (54.385,131.970,144.259)
OP2: (52.649,129.569,149.586)
C3': (55.314,130.991,144.712)
C1': (57.576,130.670,145.335)
C5': (54.390,130.379,147.026)
O4': (56.712,130.348,146.401)
C8: (59.656,129.353,144.773)
O2': (56.949,132.733,144.379)
C6: (58.625,126.136,143.843)
C5: (58.877,127.454,144.236)
C4: (57.782,128.240,144.566)
P: (54.120,129.853,149.602)
C4': (55.463,131.057,146.215)
C2': (56.725,131.350,144.262)
C2: (56.381,126.600,144.153)
N1: (57.338,125.730,143.805)
N3: (56.494,127.866,144.547)
N6: (59.586,125.268,143.513)
N7: (60.056,128.169,144.372)
N9: (58.293,129.468,144.911)
O5': (54.470,130.820,148.392)
O3': (54.385,131.970,144.259)
Image (generated by PyMOL):