Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0224:0179
Extra
PDB:
ATOM 1 O3' C A 223 58.156 108.564 12.128 1.00 48.39 O
ATOM 2 P A A 224 58.272 108.061 10.615 1.00 49.19 P
ATOM 3 OP1 A A 224 57.960 109.249 9.779 1.00 50.50 O
ATOM 4 OP2 A A 224 57.461 106.819 10.470 1.00 49.03 O
ATOM 5 O5' A A 224 59.817 107.700 10.462 1.00 44.99 O
ATOM 6 C5' A A 224 60.265 106.661 9.583 1.00 44.81 C
ATOM 7 C4' A A 224 61.675 106.274 9.941 1.00 46.98 C
ATOM 8 O4' A A 224 62.509 107.455 9.890 1.00 47.10 O
ATOM 9 C3' A A 224 61.852 105.726 11.348 1.00 49.12 C
ATOM 10 O3' A A 224 63.055 104.969 11.446 1.00 52.36 O
ATOM 11 C2' A A 224 62.034 107.001 12.157 1.00 49.59 C
ATOM 12 O2' A A 224 62.714 106.798 13.379 1.00 50.39 O
ATOM 13 C1' A A 224 62.875 107.840 11.197 1.00 47.83 C
ATOM 14 N9 A A 224 62.649 109.279 11.309 1.00 47.99 N
ATOM 15 C8 A A 224 61.492 109.985 11.068 1.00 46.85 C
ATOM 16 N7 A A 224 61.623 111.280 11.215 1.00 45.97 N
ATOM 17 C5 A A 224 62.952 111.438 11.583 1.00 46.18 C
ATOM 18 C6 A A 224 63.716 112.570 11.871 1.00 45.88 C
ATOM 19 N6 A A 224 63.232 113.811 11.834 1.00 46.70 N
ATOM 20 N1 A A 224 65.013 112.387 12.204 1.00 46.46 N
ATOM 21 C2 A A 224 65.495 111.139 12.245 1.00 46.80 C
ATOM 22 N3 A A 224 64.876 109.992 11.994 1.00 47.60 N
ATOM 23 C4 A A 224 63.591 110.214 11.661 1.00 47.26 C
ATOM 24 P G A 225 63.291 103.677 10.518 1.00 55.26 P
ATOM 25 OP1 G A 225 62.074 103.470 9.681 1.00 53.41 O
ATOM 26 OP2 G A 225 63.786 102.560 11.379 1.00 56.53 O
ATOM 27 O5' G A 225 64.499 104.157 9.590 1.00 55.40 O
TER
ATOM 1 O3' G B 178 71.436 105.109 19.221 1.00 48.83 O
ATOM 2 P A B 179 72.784 105.126 18.354 1.00 50.53 P
ATOM 3 OP1 A B 179 73.226 103.718 18.206 1.00 50.59 O
ATOM 4 OP2 A B 179 73.717 106.123 18.944 1.00 50.31 O
ATOM 5 O5' A B 179 72.272 105.643 16.937 1.00 51.08 O
ATOM 6 C5' A B 179 72.729 105.045 15.708 1.00 51.80 C
ATOM 7 C4' A B 179 71.917 103.804 15.389 1.00 52.08 C
ATOM 8 O4' A B 179 70.535 103.978 15.787 1.00 51.15 O
ATOM 9 C3' A B 179 71.873 103.424 13.918 1.00 52.13 C
ATOM 10 O3' A B 179 71.656 102.032 13.753 1.00 51.89 O
ATOM 11 C2' A B 179 70.658 104.194 13.431 1.00 51.62 C
ATOM 12 O2' A B 179 70.098 103.601 12.282 1.00 53.72 O
ATOM 13 C1' A B 179 69.721 104.116 14.641 1.00 50.51 C
ATOM 14 N9 A B 179 68.971 105.356 14.788 1.00 50.06 N
ATOM 15 C8 A B 179 69.398 106.527 15.361 1.00 50.43 C
ATOM 16 N7 A B 179 68.533 107.505 15.271 1.00 50.82 N
ATOM 17 C5 A B 179 67.455 106.936 14.609 1.00 51.11 C
ATOM 18 C6 A B 179 66.224 107.461 14.177 1.00 51.46 C
ATOM 19 N6 A B 179 65.861 108.736 14.336 1.00 50.48 N
ATOM 20 N1 A B 179 65.371 106.621 13.555 1.00 52.78 N
ATOM 21 C2 A B 179 65.744 105.343 13.371 1.00 52.45 C
ATOM 22 N3 A B 179 66.879 104.739 13.714 1.00 51.16 N
ATOM 23 C4 A B 179 67.702 105.601 14.333 1.00 51.02 C
ATOM 24 P A B 180 72.910 101.046 13.603 1.00 54.02 P
ATOM 25 OP1 A B 180 74.086 101.849 13.159 1.00 53.63 O
ATOM 26 OP2 A B 180 72.483 99.864 12.800 1.00 52.06 O
ATOM 27 O5' A B 180 73.183 100.602 15.108 1.00 53.19 O
TER
ATOM 2 P A A 224 58.272 108.061 10.615 1.00 49.19 P
ATOM 3 OP1 A A 224 57.960 109.249 9.779 1.00 50.50 O
ATOM 4 OP2 A A 224 57.461 106.819 10.470 1.00 49.03 O
ATOM 5 O5' A A 224 59.817 107.700 10.462 1.00 44.99 O
ATOM 6 C5' A A 224 60.265 106.661 9.583 1.00 44.81 C
ATOM 7 C4' A A 224 61.675 106.274 9.941 1.00 46.98 C
ATOM 8 O4' A A 224 62.509 107.455 9.890 1.00 47.10 O
ATOM 9 C3' A A 224 61.852 105.726 11.348 1.00 49.12 C
ATOM 10 O3' A A 224 63.055 104.969 11.446 1.00 52.36 O
ATOM 11 C2' A A 224 62.034 107.001 12.157 1.00 49.59 C
ATOM 12 O2' A A 224 62.714 106.798 13.379 1.00 50.39 O
ATOM 13 C1' A A 224 62.875 107.840 11.197 1.00 47.83 C
ATOM 14 N9 A A 224 62.649 109.279 11.309 1.00 47.99 N
ATOM 15 C8 A A 224 61.492 109.985 11.068 1.00 46.85 C
ATOM 16 N7 A A 224 61.623 111.280 11.215 1.00 45.97 N
ATOM 17 C5 A A 224 62.952 111.438 11.583 1.00 46.18 C
ATOM 18 C6 A A 224 63.716 112.570 11.871 1.00 45.88 C
ATOM 19 N6 A A 224 63.232 113.811 11.834 1.00 46.70 N
ATOM 20 N1 A A 224 65.013 112.387 12.204 1.00 46.46 N
ATOM 21 C2 A A 224 65.495 111.139 12.245 1.00 46.80 C
ATOM 22 N3 A A 224 64.876 109.992 11.994 1.00 47.60 N
ATOM 23 C4 A A 224 63.591 110.214 11.661 1.00 47.26 C
ATOM 24 P G A 225 63.291 103.677 10.518 1.00 55.26 P
ATOM 25 OP1 G A 225 62.074 103.470 9.681 1.00 53.41 O
ATOM 26 OP2 G A 225 63.786 102.560 11.379 1.00 56.53 O
ATOM 27 O5' G A 225 64.499 104.157 9.590 1.00 55.40 O
TER
ATOM 1 O3' G B 178 71.436 105.109 19.221 1.00 48.83 O
ATOM 2 P A B 179 72.784 105.126 18.354 1.00 50.53 P
ATOM 3 OP1 A B 179 73.226 103.718 18.206 1.00 50.59 O
ATOM 4 OP2 A B 179 73.717 106.123 18.944 1.00 50.31 O
ATOM 5 O5' A B 179 72.272 105.643 16.937 1.00 51.08 O
ATOM 6 C5' A B 179 72.729 105.045 15.708 1.00 51.80 C
ATOM 7 C4' A B 179 71.917 103.804 15.389 1.00 52.08 C
ATOM 8 O4' A B 179 70.535 103.978 15.787 1.00 51.15 O
ATOM 9 C3' A B 179 71.873 103.424 13.918 1.00 52.13 C
ATOM 10 O3' A B 179 71.656 102.032 13.753 1.00 51.89 O
ATOM 11 C2' A B 179 70.658 104.194 13.431 1.00 51.62 C
ATOM 12 O2' A B 179 70.098 103.601 12.282 1.00 53.72 O
ATOM 13 C1' A B 179 69.721 104.116 14.641 1.00 50.51 C
ATOM 14 N9 A B 179 68.971 105.356 14.788 1.00 50.06 N
ATOM 15 C8 A B 179 69.398 106.527 15.361 1.00 50.43 C
ATOM 16 N7 A B 179 68.533 107.505 15.271 1.00 50.82 N
ATOM 17 C5 A B 179 67.455 106.936 14.609 1.00 51.11 C
ATOM 18 C6 A B 179 66.224 107.461 14.177 1.00 51.46 C
ATOM 19 N6 A B 179 65.861 108.736 14.336 1.00 50.48 N
ATOM 20 N1 A B 179 65.371 106.621 13.555 1.00 52.78 N
ATOM 21 C2 A B 179 65.744 105.343 13.371 1.00 52.45 C
ATOM 22 N3 A B 179 66.879 104.739 13.714 1.00 51.16 N
ATOM 23 C4 A B 179 67.702 105.601 14.333 1.00 51.02 C
ATOM 24 P A B 180 72.910 101.046 13.603 1.00 54.02 P
ATOM 25 OP1 A B 180 74.086 101.849 13.159 1.00 53.63 O
ATOM 26 OP2 A B 180 72.483 99.864 12.800 1.00 52.06 O
ATOM 27 O5' A B 180 73.183 100.602 15.108 1.00 53.19 O
TER
Atoms:
OP1: (57.960,109.249,9.779)
OP2: (57.461,106.819,10.470)
C3': (61.852,105.726,11.348)
C1': (62.875,107.840,11.197)
C5': (60.265,106.661,9.583)
O4': (62.509,107.455,9.890)
C8: (61.492,109.985,11.068)
O2': (62.714,106.798,13.379)
C6: (63.716,112.570,11.871)
C5: (62.952,111.438,11.583)
C4: (63.591,110.214,11.661)
P: (58.272,108.061,10.615)
C4': (61.675,106.274,9.941)
C2': (62.034,107.001,12.157)
C2: (65.495,111.139,12.245)
N1: (65.013,112.387,12.204)
N3: (64.876,109.992,11.994)
N6: (63.232,113.811,11.834)
N7: (61.623,111.280,11.215)
N9: (62.649,109.279,11.309)
O5': (59.817,107.700,10.462)
O3': (63.055,104.969,11.446)
OP2: (57.461,106.819,10.470)
C3': (61.852,105.726,11.348)
C1': (62.875,107.840,11.197)
C5': (60.265,106.661,9.583)
O4': (62.509,107.455,9.890)
C8: (61.492,109.985,11.068)
O2': (62.714,106.798,13.379)
C6: (63.716,112.570,11.871)
C5: (62.952,111.438,11.583)
C4: (63.591,110.214,11.661)
P: (58.272,108.061,10.615)
C4': (61.675,106.274,9.941)
C2': (62.034,107.001,12.157)
C2: (65.495,111.139,12.245)
N1: (65.013,112.387,12.204)
N3: (64.876,109.992,11.994)
N6: (63.232,113.811,11.834)
N7: (61.623,111.280,11.215)
N9: (62.649,109.279,11.309)
O5': (59.817,107.700,10.462)
O3': (63.055,104.969,11.446)
OP1: (73.226,103.718,18.206)
OP2: (73.717,106.123,18.944)
C3': (71.873,103.424,13.918)
C1': (69.721,104.116,14.641)
C5': (72.729,105.045,15.708)
O4': (70.535,103.978,15.787)
C8: (69.398,106.527,15.361)
O2': (70.098,103.601,12.282)
C6: (66.224,107.461,14.177)
C5: (67.455,106.936,14.609)
C4: (67.702,105.601,14.333)
P: (72.784,105.126,18.354)
C4': (71.917,103.804,15.389)
C2': (70.658,104.194,13.431)
C2: (65.744,105.343,13.371)
N1: (65.371,106.621,13.555)
N3: (66.879,104.739,13.714)
N6: (65.861,108.736,14.336)
N7: (68.533,107.505,15.271)
N9: (68.971,105.356,14.788)
O5': (72.272,105.643,16.937)
O3': (71.656,102.032,13.753)
OP2: (73.717,106.123,18.944)
C3': (71.873,103.424,13.918)
C1': (69.721,104.116,14.641)
C5': (72.729,105.045,15.708)
O4': (70.535,103.978,15.787)
C8: (69.398,106.527,15.361)
O2': (70.098,103.601,12.282)
C6: (66.224,107.461,14.177)
C5: (67.455,106.936,14.609)
C4: (67.702,105.601,14.333)
P: (72.784,105.126,18.354)
C4': (71.917,103.804,15.389)
C2': (70.658,104.194,13.431)
C2: (65.744,105.343,13.371)
N1: (65.371,106.621,13.555)
N3: (66.879,104.739,13.714)
N6: (65.861,108.736,14.336)
N7: (68.533,107.505,15.271)
N9: (68.971,105.356,14.788)
O5': (72.272,105.643,16.937)
O3': (71.656,102.032,13.753)
Image (generated by PyMOL):