Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:937:944
Extra
PDB:
ATOM 1 O3' C A 36 82.642 22.609 82.332 1.00 69.67 O
ATOM 2 P A A 37 84.181 23.042 82.472 1.00 70.33 P
ATOM 3 OP1 A A 37 84.331 24.409 81.923 1.00 72.48 O
ATOM 4 OP2 A A 37 85.008 21.935 81.920 1.00 71.84 O
ATOM 5 O5' A A 37 84.420 23.134 84.041 1.00 69.74 O
ATOM 6 C5' A A 37 83.698 24.087 84.827 1.00 71.52 C
ATOM 7 C4' A A 37 83.810 23.749 86.287 1.00 73.01 C
ATOM 8 O4' A A 37 83.361 22.384 86.494 1.00 74.82 O
ATOM 9 C3' A A 37 85.217 23.740 86.849 1.00 73.75 C
ATOM 10 O3' A A 37 85.661 25.041 87.179 1.00 74.65 O
ATOM 11 C2' A A 37 85.047 22.878 88.086 1.00 74.23 C
ATOM 12 O2' A A 37 84.408 23.575 89.132 1.00 74.48 O
ATOM 13 C1' A A 37 84.097 21.803 87.561 1.00 75.26 C
ATOM 14 N9 A A 37 84.823 20.636 87.058 1.00 76.31 N
ATOM 15 C8 A A 37 84.984 20.208 85.762 1.00 76.72 C
ATOM 16 N7 A A 37 85.715 19.126 85.649 1.00 77.26 N
ATOM 17 C5 A A 37 86.056 18.819 86.959 1.00 78.16 C
ATOM 18 C6 A A 37 86.824 17.784 87.516 1.00 79.52 C
ATOM 19 N6 A A 37 87.420 16.832 86.790 1.00 80.31 N
ATOM 20 N1 A A 37 86.964 17.761 88.862 1.00 79.93 N
ATOM 21 C2 A A 37 86.370 18.720 89.586 1.00 78.83 C
ATOM 22 N3 A A 37 85.629 19.744 89.177 1.00 77.69 N
ATOM 23 C4 A A 37 85.509 19.736 87.837 1.00 77.34 C
ATOM 24 P U A 38 87.008 25.604 86.520 1.00 76.60 P
ATOM 25 OP1 U A 38 86.576 26.507 85.427 1.00 77.80 O
ATOM 26 OP2 U A 38 87.907 24.463 86.219 1.00 77.16 O
ATOM 27 O5' U A 38 87.680 26.468 87.674 1.00 76.79 O
TER
ATOM 1 O3' A B 43 80.839 20.228 99.549 1.00 79.03 O
ATOM 2 P A B 44 79.741 19.915 98.425 1.00 78.42 P
ATOM 3 OP1 A B 44 78.444 19.739 99.125 1.00 78.40 O
ATOM 4 OP2 A B 44 80.249 18.837 97.532 1.00 77.11 O
ATOM 5 O5' A B 44 79.679 21.265 97.584 1.00 79.19 O
ATOM 6 C5' A B 44 79.218 22.500 98.184 1.00 77.43 C
ATOM 7 C4' A B 44 79.346 23.637 97.198 1.00 74.67 C
ATOM 8 O4' A B 44 80.751 23.890 96.946 1.00 74.12 O
ATOM 9 C3' A B 44 78.751 23.365 95.825 1.00 73.29 C
ATOM 10 O3' A B 44 77.357 23.645 95.799 1.00 70.99 O
ATOM 11 C2' A B 44 79.551 24.301 94.934 1.00 74.42 C
ATOM 12 O2' A B 44 79.096 25.637 94.998 1.00 76.09 O
ATOM 13 C1' A B 44 80.937 24.215 95.580 1.00 74.99 C
ATOM 14 N9 A B 44 81.797 23.194 94.977 1.00 75.60 N
ATOM 15 C8 A B 44 82.135 21.957 95.475 1.00 75.97 C
ATOM 16 N7 A B 44 82.925 21.269 94.687 1.00 75.95 N
ATOM 17 C5 A B 44 83.122 22.107 93.598 1.00 75.63 C
ATOM 18 C6 A B 44 83.861 21.962 92.414 1.00 75.62 C
ATOM 19 N6 A B 44 84.579 20.878 92.114 1.00 76.40 N
ATOM 20 N1 A B 44 83.840 22.982 91.534 1.00 75.57 N
ATOM 21 C2 A B 44 83.129 24.073 91.833 1.00 76.05 C
ATOM 22 N3 A B 44 82.399 24.332 92.911 1.00 76.12 N
ATOM 23 C4 A B 44 82.436 23.296 93.765 1.00 75.82 C
ATOM 24 P C B 45 76.366 22.704 94.952 1.00 70.46 P
ATOM 25 OP1 C B 45 75.000 23.246 95.168 1.00 69.94 O
ATOM 26 OP2 C B 45 76.648 21.287 95.281 1.00 70.78 O
ATOM 27 O5' C B 45 76.795 22.932 93.432 1.00 69.50 O
TER
ATOM 2 P A A 37 84.181 23.042 82.472 1.00 70.33 P
ATOM 3 OP1 A A 37 84.331 24.409 81.923 1.00 72.48 O
ATOM 4 OP2 A A 37 85.008 21.935 81.920 1.00 71.84 O
ATOM 5 O5' A A 37 84.420 23.134 84.041 1.00 69.74 O
ATOM 6 C5' A A 37 83.698 24.087 84.827 1.00 71.52 C
ATOM 7 C4' A A 37 83.810 23.749 86.287 1.00 73.01 C
ATOM 8 O4' A A 37 83.361 22.384 86.494 1.00 74.82 O
ATOM 9 C3' A A 37 85.217 23.740 86.849 1.00 73.75 C
ATOM 10 O3' A A 37 85.661 25.041 87.179 1.00 74.65 O
ATOM 11 C2' A A 37 85.047 22.878 88.086 1.00 74.23 C
ATOM 12 O2' A A 37 84.408 23.575 89.132 1.00 74.48 O
ATOM 13 C1' A A 37 84.097 21.803 87.561 1.00 75.26 C
ATOM 14 N9 A A 37 84.823 20.636 87.058 1.00 76.31 N
ATOM 15 C8 A A 37 84.984 20.208 85.762 1.00 76.72 C
ATOM 16 N7 A A 37 85.715 19.126 85.649 1.00 77.26 N
ATOM 17 C5 A A 37 86.056 18.819 86.959 1.00 78.16 C
ATOM 18 C6 A A 37 86.824 17.784 87.516 1.00 79.52 C
ATOM 19 N6 A A 37 87.420 16.832 86.790 1.00 80.31 N
ATOM 20 N1 A A 37 86.964 17.761 88.862 1.00 79.93 N
ATOM 21 C2 A A 37 86.370 18.720 89.586 1.00 78.83 C
ATOM 22 N3 A A 37 85.629 19.744 89.177 1.00 77.69 N
ATOM 23 C4 A A 37 85.509 19.736 87.837 1.00 77.34 C
ATOM 24 P U A 38 87.008 25.604 86.520 1.00 76.60 P
ATOM 25 OP1 U A 38 86.576 26.507 85.427 1.00 77.80 O
ATOM 26 OP2 U A 38 87.907 24.463 86.219 1.00 77.16 O
ATOM 27 O5' U A 38 87.680 26.468 87.674 1.00 76.79 O
TER
ATOM 1 O3' A B 43 80.839 20.228 99.549 1.00 79.03 O
ATOM 2 P A B 44 79.741 19.915 98.425 1.00 78.42 P
ATOM 3 OP1 A B 44 78.444 19.739 99.125 1.00 78.40 O
ATOM 4 OP2 A B 44 80.249 18.837 97.532 1.00 77.11 O
ATOM 5 O5' A B 44 79.679 21.265 97.584 1.00 79.19 O
ATOM 6 C5' A B 44 79.218 22.500 98.184 1.00 77.43 C
ATOM 7 C4' A B 44 79.346 23.637 97.198 1.00 74.67 C
ATOM 8 O4' A B 44 80.751 23.890 96.946 1.00 74.12 O
ATOM 9 C3' A B 44 78.751 23.365 95.825 1.00 73.29 C
ATOM 10 O3' A B 44 77.357 23.645 95.799 1.00 70.99 O
ATOM 11 C2' A B 44 79.551 24.301 94.934 1.00 74.42 C
ATOM 12 O2' A B 44 79.096 25.637 94.998 1.00 76.09 O
ATOM 13 C1' A B 44 80.937 24.215 95.580 1.00 74.99 C
ATOM 14 N9 A B 44 81.797 23.194 94.977 1.00 75.60 N
ATOM 15 C8 A B 44 82.135 21.957 95.475 1.00 75.97 C
ATOM 16 N7 A B 44 82.925 21.269 94.687 1.00 75.95 N
ATOM 17 C5 A B 44 83.122 22.107 93.598 1.00 75.63 C
ATOM 18 C6 A B 44 83.861 21.962 92.414 1.00 75.62 C
ATOM 19 N6 A B 44 84.579 20.878 92.114 1.00 76.40 N
ATOM 20 N1 A B 44 83.840 22.982 91.534 1.00 75.57 N
ATOM 21 C2 A B 44 83.129 24.073 91.833 1.00 76.05 C
ATOM 22 N3 A B 44 82.399 24.332 92.911 1.00 76.12 N
ATOM 23 C4 A B 44 82.436 23.296 93.765 1.00 75.82 C
ATOM 24 P C B 45 76.366 22.704 94.952 1.00 70.46 P
ATOM 25 OP1 C B 45 75.000 23.246 95.168 1.00 69.94 O
ATOM 26 OP2 C B 45 76.648 21.287 95.281 1.00 70.78 O
ATOM 27 O5' C B 45 76.795 22.932 93.432 1.00 69.50 O
TER
Atoms:
OP1: (84.331,24.409,81.923)
OP2: (85.008,21.935,81.920)
C3': (85.217,23.740,86.849)
C1': (84.097,21.803,87.561)
C5': (83.698,24.087,84.827)
O4': (83.361,22.384,86.494)
C8: (84.984,20.208,85.762)
O2': (84.408,23.575,89.132)
C6: (86.824,17.784,87.516)
C5: (86.056,18.819,86.959)
C4: (85.509,19.736,87.837)
P: (84.181,23.042,82.472)
C4': (83.810,23.749,86.287)
C2': (85.047,22.878,88.086)
C2: (86.370,18.720,89.586)
N1: (86.964,17.761,88.862)
N3: (85.629,19.744,89.177)
N6: (87.420,16.832,86.790)
N7: (85.715,19.126,85.649)
N9: (84.823,20.636,87.058)
O5': (84.420,23.134,84.041)
O3': (85.661,25.041,87.179)
OP2: (85.008,21.935,81.920)
C3': (85.217,23.740,86.849)
C1': (84.097,21.803,87.561)
C5': (83.698,24.087,84.827)
O4': (83.361,22.384,86.494)
C8: (84.984,20.208,85.762)
O2': (84.408,23.575,89.132)
C6: (86.824,17.784,87.516)
C5: (86.056,18.819,86.959)
C4: (85.509,19.736,87.837)
P: (84.181,23.042,82.472)
C4': (83.810,23.749,86.287)
C2': (85.047,22.878,88.086)
C2: (86.370,18.720,89.586)
N1: (86.964,17.761,88.862)
N3: (85.629,19.744,89.177)
N6: (87.420,16.832,86.790)
N7: (85.715,19.126,85.649)
N9: (84.823,20.636,87.058)
O5': (84.420,23.134,84.041)
O3': (85.661,25.041,87.179)
OP1: (78.444,19.739,99.125)
OP2: (80.249,18.837,97.532)
C3': (78.751,23.365,95.825)
C1': (80.937,24.215,95.580)
C5': (79.218,22.500,98.184)
O4': (80.751,23.890,96.946)
C8: (82.135,21.957,95.475)
O2': (79.096,25.637,94.998)
C6: (83.861,21.962,92.414)
C5: (83.122,22.107,93.598)
C4: (82.436,23.296,93.765)
P: (79.741,19.915,98.425)
C4': (79.346,23.637,97.198)
C2': (79.551,24.301,94.934)
C2: (83.129,24.073,91.833)
N1: (83.840,22.982,91.534)
N3: (82.399,24.332,92.911)
N6: (84.579,20.878,92.114)
N7: (82.925,21.269,94.687)
N9: (81.797,23.194,94.977)
O5': (79.679,21.265,97.584)
O3': (77.357,23.645,95.799)
OP2: (80.249,18.837,97.532)
C3': (78.751,23.365,95.825)
C1': (80.937,24.215,95.580)
C5': (79.218,22.500,98.184)
O4': (80.751,23.890,96.946)
C8: (82.135,21.957,95.475)
O2': (79.096,25.637,94.998)
C6: (83.861,21.962,92.414)
C5: (83.122,22.107,93.598)
C4: (82.436,23.296,93.765)
P: (79.741,19.915,98.425)
C4': (79.346,23.637,97.198)
C2': (79.551,24.301,94.934)
C2: (83.129,24.073,91.833)
N1: (83.840,22.982,91.534)
N3: (82.399,24.332,92.911)
N6: (84.579,20.878,92.114)
N7: (82.925,21.269,94.687)
N9: (81.797,23.194,94.977)
O5': (79.679,21.265,97.584)
O3': (77.357,23.645,95.799)
Image (generated by PyMOL):