Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CCM:0560:0561
Extra
PDB:
ATOM 1 O3' C A 559 -9.448 97.450 125.087 1.00 65.36 O
ATOM 2 P G A 560 -9.212 96.456 126.327 1.00 66.31 P
ATOM 3 OP1 G A 560 -9.676 97.179 127.536 1.00 65.84 O
ATOM 4 OP2 G A 560 -7.820 95.941 126.274 1.00 65.89 O
ATOM 5 O5' G A 560 -10.211 95.250 126.021 1.00 67.22 O
ATOM 6 C5' G A 560 -11.630 95.491 125.943 1.00 69.68 C
ATOM 7 C4' G A 560 -12.363 94.264 125.454 1.00 70.73 C
ATOM 8 O4' G A 560 -12.001 93.980 124.078 1.00 70.33 O
ATOM 9 C3' G A 560 -12.087 92.957 126.175 1.00 72.24 C
ATOM 10 O3' G A 560 -12.788 92.861 127.413 1.00 74.21 O
ATOM 11 C2' G A 560 -12.565 91.934 125.151 1.00 71.44 C
ATOM 12 O2' G A 560 -13.971 91.798 125.129 1.00 71.65 O
ATOM 13 C1' G A 560 -12.100 92.583 123.843 1.00 69.91 C
ATOM 14 N9 G A 560 -10.793 92.096 123.412 1.00 67.60 N
ATOM 15 C8 G A 560 -9.579 92.719 123.574 1.00 66.64 C
ATOM 16 N7 G A 560 -8.580 92.021 123.107 1.00 65.82 N
ATOM 17 C5 G A 560 -9.171 90.871 122.599 1.00 65.65 C
ATOM 18 C6 G A 560 -8.590 89.738 121.965 1.00 65.19 C
ATOM 19 O6 G A 560 -7.400 89.517 121.719 1.00 65.85 O
ATOM 20 N1 G A 560 -9.554 88.802 121.612 1.00 64.06 N
ATOM 21 C2 G A 560 -10.899 88.930 121.838 1.00 63.47 C
ATOM 22 N2 G A 560 -11.658 87.908 121.436 1.00 62.11 N
ATOM 23 N3 G A 560 -11.454 89.979 122.421 1.00 64.53 N
ATOM 24 C4 G A 560 -10.537 90.905 122.775 1.00 66.10 C
ATOM 25 P A A 561 -12.205 91.923 128.585 1.00 76.47 P
ATOM 26 OP1 A A 561 -13.085 92.102 129.771 1.00 75.41 O
ATOM 27 OP2 A A 561 -10.745 92.173 128.716 1.00 75.01 O
ATOM 28 O5' A A 561 -12.405 90.445 128.021 1.00 74.54 O
TER
ATOM 1 O3' G B 560 -12.788 92.861 127.413 1.00 74.21 O
ATOM 2 P A B 561 -12.205 91.923 128.585 1.00 76.47 P
ATOM 3 OP1 A B 561 -13.085 92.102 129.771 1.00 75.41 O
ATOM 4 OP2 A B 561 -10.745 92.173 128.716 1.00 75.01 O
ATOM 5 O5' A B 561 -12.405 90.445 128.021 1.00 74.54 O
ATOM 6 C5' A B 561 -13.721 89.890 127.862 1.00 74.24 C
ATOM 7 C4' A B 561 -13.634 88.490 127.311 1.00 75.09 C
ATOM 8 O4' A B 561 -13.087 88.536 125.966 1.00 75.99 O
ATOM 9 C3' A B 561 -12.695 87.542 128.039 1.00 76.23 C
ATOM 10 O3' A B 561 -13.251 87.001 129.232 1.00 75.61 O
ATOM 11 C2' A B 561 -12.426 86.486 126.973 1.00 76.82 C
ATOM 12 O2' A B 561 -13.473 85.546 126.823 1.00 76.72 O
ATOM 13 C1' A B 561 -12.327 87.358 125.718 1.00 76.37 C
ATOM 14 N9 A B 561 -10.939 87.740 125.447 1.00 75.11 N
ATOM 15 C8 A B 561 -10.287 88.901 125.790 1.00 74.22 C
ATOM 16 N7 A B 561 -9.022 88.919 125.443 1.00 73.29 N
ATOM 17 C5 A B 561 -8.830 87.692 124.819 1.00 73.07 C
ATOM 18 C6 A B 561 -7.699 87.094 124.229 1.00 72.37 C
ATOM 19 N6 A B 561 -6.499 87.672 124.173 1.00 71.78 N
ATOM 20 N1 A B 561 -7.847 85.864 123.693 1.00 72.18 N
ATOM 21 C2 A B 561 -9.052 85.280 123.754 1.00 73.47 C
ATOM 22 N3 A B 561 -10.187 85.737 124.282 1.00 73.26 N
ATOM 23 C4 A B 561 -10.005 86.962 124.805 1.00 73.73 C
ATOM 24 P G B 562 -12.280 86.624 130.459 1.00 75.06 P
ATOM 25 OP1 G B 562 -13.145 86.165 131.569 1.00 76.84 O
ATOM 26 OP2 G B 562 -11.334 87.744 130.690 1.00 75.92 O
ATOM 27 O5' G B 562 -11.463 85.365 129.931 1.00 73.91 O
TER
ATOM 2 P G A 560 -9.212 96.456 126.327 1.00 66.31 P
ATOM 3 OP1 G A 560 -9.676 97.179 127.536 1.00 65.84 O
ATOM 4 OP2 G A 560 -7.820 95.941 126.274 1.00 65.89 O
ATOM 5 O5' G A 560 -10.211 95.250 126.021 1.00 67.22 O
ATOM 6 C5' G A 560 -11.630 95.491 125.943 1.00 69.68 C
ATOM 7 C4' G A 560 -12.363 94.264 125.454 1.00 70.73 C
ATOM 8 O4' G A 560 -12.001 93.980 124.078 1.00 70.33 O
ATOM 9 C3' G A 560 -12.087 92.957 126.175 1.00 72.24 C
ATOM 10 O3' G A 560 -12.788 92.861 127.413 1.00 74.21 O
ATOM 11 C2' G A 560 -12.565 91.934 125.151 1.00 71.44 C
ATOM 12 O2' G A 560 -13.971 91.798 125.129 1.00 71.65 O
ATOM 13 C1' G A 560 -12.100 92.583 123.843 1.00 69.91 C
ATOM 14 N9 G A 560 -10.793 92.096 123.412 1.00 67.60 N
ATOM 15 C8 G A 560 -9.579 92.719 123.574 1.00 66.64 C
ATOM 16 N7 G A 560 -8.580 92.021 123.107 1.00 65.82 N
ATOM 17 C5 G A 560 -9.171 90.871 122.599 1.00 65.65 C
ATOM 18 C6 G A 560 -8.590 89.738 121.965 1.00 65.19 C
ATOM 19 O6 G A 560 -7.400 89.517 121.719 1.00 65.85 O
ATOM 20 N1 G A 560 -9.554 88.802 121.612 1.00 64.06 N
ATOM 21 C2 G A 560 -10.899 88.930 121.838 1.00 63.47 C
ATOM 22 N2 G A 560 -11.658 87.908 121.436 1.00 62.11 N
ATOM 23 N3 G A 560 -11.454 89.979 122.421 1.00 64.53 N
ATOM 24 C4 G A 560 -10.537 90.905 122.775 1.00 66.10 C
ATOM 25 P A A 561 -12.205 91.923 128.585 1.00 76.47 P
ATOM 26 OP1 A A 561 -13.085 92.102 129.771 1.00 75.41 O
ATOM 27 OP2 A A 561 -10.745 92.173 128.716 1.00 75.01 O
ATOM 28 O5' A A 561 -12.405 90.445 128.021 1.00 74.54 O
TER
ATOM 1 O3' G B 560 -12.788 92.861 127.413 1.00 74.21 O
ATOM 2 P A B 561 -12.205 91.923 128.585 1.00 76.47 P
ATOM 3 OP1 A B 561 -13.085 92.102 129.771 1.00 75.41 O
ATOM 4 OP2 A B 561 -10.745 92.173 128.716 1.00 75.01 O
ATOM 5 O5' A B 561 -12.405 90.445 128.021 1.00 74.54 O
ATOM 6 C5' A B 561 -13.721 89.890 127.862 1.00 74.24 C
ATOM 7 C4' A B 561 -13.634 88.490 127.311 1.00 75.09 C
ATOM 8 O4' A B 561 -13.087 88.536 125.966 1.00 75.99 O
ATOM 9 C3' A B 561 -12.695 87.542 128.039 1.00 76.23 C
ATOM 10 O3' A B 561 -13.251 87.001 129.232 1.00 75.61 O
ATOM 11 C2' A B 561 -12.426 86.486 126.973 1.00 76.82 C
ATOM 12 O2' A B 561 -13.473 85.546 126.823 1.00 76.72 O
ATOM 13 C1' A B 561 -12.327 87.358 125.718 1.00 76.37 C
ATOM 14 N9 A B 561 -10.939 87.740 125.447 1.00 75.11 N
ATOM 15 C8 A B 561 -10.287 88.901 125.790 1.00 74.22 C
ATOM 16 N7 A B 561 -9.022 88.919 125.443 1.00 73.29 N
ATOM 17 C5 A B 561 -8.830 87.692 124.819 1.00 73.07 C
ATOM 18 C6 A B 561 -7.699 87.094 124.229 1.00 72.37 C
ATOM 19 N6 A B 561 -6.499 87.672 124.173 1.00 71.78 N
ATOM 20 N1 A B 561 -7.847 85.864 123.693 1.00 72.18 N
ATOM 21 C2 A B 561 -9.052 85.280 123.754 1.00 73.47 C
ATOM 22 N3 A B 561 -10.187 85.737 124.282 1.00 73.26 N
ATOM 23 C4 A B 561 -10.005 86.962 124.805 1.00 73.73 C
ATOM 24 P G B 562 -12.280 86.624 130.459 1.00 75.06 P
ATOM 25 OP1 G B 562 -13.145 86.165 131.569 1.00 76.84 O
ATOM 26 OP2 G B 562 -11.334 87.744 130.690 1.00 75.92 O
ATOM 27 O5' G B 562 -11.463 85.365 129.931 1.00 73.91 O
TER
Atoms:
OP1: (-9.676,97.179,127.536)
OP2: (-7.820,95.941,126.274)
C3': (-12.087,92.957,126.175)
C1': (-12.100,92.583,123.843)
C5': (-11.630,95.491,125.943)
O6: (-7.400,89.517,121.719)
O4': (-12.001,93.980,124.078)
C8: (-9.579,92.719,123.574)
C2: (-10.899,88.930,121.838)
C6: (-8.590,89.738,121.965)
C5: (-9.171,90.871,122.599)
C4: (-10.537,90.905,122.775)
P: (-9.212,96.456,126.327)
C4': (-12.363,94.264,125.454)
C2': (-12.565,91.934,125.151)
O2': (-13.971,91.798,125.129)
N1: (-9.554,88.802,121.612)
N2: (-11.658,87.908,121.436)
N3: (-11.454,89.979,122.421)
N7: (-8.580,92.021,123.107)
N9: (-10.793,92.096,123.412)
O5': (-10.211,95.250,126.021)
O3': (-12.788,92.861,127.413)
OP2: (-7.820,95.941,126.274)
C3': (-12.087,92.957,126.175)
C1': (-12.100,92.583,123.843)
C5': (-11.630,95.491,125.943)
O6: (-7.400,89.517,121.719)
O4': (-12.001,93.980,124.078)
C8: (-9.579,92.719,123.574)
C2: (-10.899,88.930,121.838)
C6: (-8.590,89.738,121.965)
C5: (-9.171,90.871,122.599)
C4: (-10.537,90.905,122.775)
P: (-9.212,96.456,126.327)
C4': (-12.363,94.264,125.454)
C2': (-12.565,91.934,125.151)
O2': (-13.971,91.798,125.129)
N1: (-9.554,88.802,121.612)
N2: (-11.658,87.908,121.436)
N3: (-11.454,89.979,122.421)
N7: (-8.580,92.021,123.107)
N9: (-10.793,92.096,123.412)
O5': (-10.211,95.250,126.021)
O3': (-12.788,92.861,127.413)
OP1: (-13.085,92.102,129.771)
OP2: (-10.745,92.173,128.716)
C3': (-12.695,87.542,128.039)
C1': (-12.327,87.358,125.718)
C5': (-13.721,89.890,127.862)
O4': (-13.087,88.536,125.966)
C8: (-10.287,88.901,125.790)
O2': (-13.473,85.546,126.823)
C6: (-7.699,87.094,124.229)
C5: (-8.830,87.692,124.819)
C4: (-10.005,86.962,124.805)
P: (-12.205,91.923,128.585)
C4': (-13.634,88.490,127.311)
C2': (-12.426,86.486,126.973)
C2: (-9.052,85.280,123.754)
N1: (-7.847,85.864,123.693)
N3: (-10.187,85.737,124.282)
N6: (-6.499,87.672,124.173)
N7: (-9.022,88.919,125.443)
N9: (-10.939,87.740,125.447)
O5': (-12.405,90.445,128.021)
O3': (-13.251,87.001,129.232)
OP2: (-10.745,92.173,128.716)
C3': (-12.695,87.542,128.039)
C1': (-12.327,87.358,125.718)
C5': (-13.721,89.890,127.862)
O4': (-13.087,88.536,125.966)
C8: (-10.287,88.901,125.790)
O2': (-13.473,85.546,126.823)
C6: (-7.699,87.094,124.229)
C5: (-8.830,87.692,124.819)
C4: (-10.005,86.962,124.805)
P: (-12.205,91.923,128.585)
C4': (-13.634,88.490,127.311)
C2': (-12.426,86.486,126.973)
C2: (-9.052,85.280,123.754)
N1: (-7.847,85.864,123.693)
N3: (-10.187,85.737,124.282)
N6: (-6.499,87.672,124.173)
N7: (-9.022,88.919,125.443)
N9: (-10.939,87.740,125.447)
O5': (-12.405,90.445,128.021)
O3': (-13.251,87.001,129.232)
Image (generated by PyMOL):