ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1MZP:B2:B3

Extra

PDB:
ATOM 1 O3' G A 1 13.804 39.640 25.044 1.00 77.35 O
ATOM 2 P G A 2 13.155 41.052 24.621 1.00 77.60 P
ATOM 3 OP1 G A 2 11.909 40.803 23.846 1.00 77.71 O
ATOM 4 OP2 G A 2 14.245 41.867 24.019 1.00 77.86 O
ATOM 5 O5' G A 2 12.736 41.717 26.006 1.00 73.68 O
ATOM 6 C5' G A 2 11.613 41.231 26.728 1.00 69.25 C
ATOM 7 C4' G A 2 11.374 42.075 27.956 1.00 66.30 C
ATOM 8 O4' G A 2 12.541 42.007 28.816 1.00 64.80 O
ATOM 9 C3' G A 2 11.192 43.567 27.733 1.00 63.98 C
ATOM 10 O3' G A 2 9.861 43.879 27.355 1.00 63.16 O
ATOM 11 C2' G A 2 11.507 44.123 29.114 1.00 62.98 C
ATOM 12 O2' G A 2 10.429 43.982 30.016 1.00 61.75 O
ATOM 13 C1' G A 2 12.664 43.220 29.540 1.00 62.37 C
ATOM 14 N9 G A 2 13.968 43.811 29.253 1.00 59.60 N
ATOM 15 C8 G A 2 14.787 43.573 28.173 1.00 57.74 C
ATOM 16 N7 G A 2 15.889 44.275 28.203 1.00 55.75 N
ATOM 17 C5 G A 2 15.790 45.017 29.375 1.00 54.98 C
ATOM 18 C6 G A 2 16.678 45.964 29.944 1.00 52.06 C
ATOM 19 O6 G A 2 17.769 46.350 29.517 1.00 51.14 O
ATOM 20 N1 G A 2 16.178 46.482 31.134 1.00 51.17 N
ATOM 21 C2 G A 2 14.978 46.137 31.704 1.00 54.10 C
ATOM 22 N2 G A 2 14.649 46.765 32.842 1.00 53.96 N
ATOM 23 N3 G A 2 14.150 45.248 31.192 1.00 56.02 N
ATOM 24 C4 G A 2 14.613 44.736 30.033 1.00 57.00 C
ATOM 25 P A A 3 9.493 45.378 26.905 1.00 63.31 P
ATOM 26 OP1 A A 3 8.031 45.443 26.630 1.00 63.64 O
ATOM 27 OP2 A A 3 10.461 45.794 25.859 1.00 61.91 O
ATOM 28 O5' A A 3 9.777 46.255 28.204 1.00 60.31 O
TER

ATOM 1 O3' G B 2 9.861 43.879 27.355 1.00 63.16 O
ATOM 2 P A B 3 9.493 45.378 26.905 1.00 63.31 P
ATOM 3 OP1 A B 3 8.031 45.443 26.630 1.00 63.64 O
ATOM 4 OP2 A B 3 10.461 45.794 25.859 1.00 61.91 O
ATOM 5 O5' A B 3 9.777 46.255 28.204 1.00 60.31 O
ATOM 6 C5' A B 3 10.062 47.643 28.094 1.00 55.27 C
ATOM 7 C4' A B 3 10.566 48.180 29.410 1.00 52.10 C
ATOM 8 O4' A B 3 11.747 47.440 29.823 1.00 51.16 O
ATOM 9 C3' A B 3 11.029 49.624 29.353 1.00 50.60 C
ATOM 10 O3' A B 3 9.933 50.502 29.533 1.00 49.27 O
ATOM 11 C2' A B 3 12.018 49.692 30.508 1.00 49.49 C
ATOM 12 O2' A B 3 11.390 49.817 31.769 1.00 48.68 O
ATOM 13 C1' A B 3 12.704 48.332 30.378 1.00 48.09 C
ATOM 14 N9 A B 3 13.854 48.383 29.473 1.00 44.02 N
ATOM 15 C8 A B 3 14.009 47.772 28.251 1.00 41.61 C
ATOM 16 N7 A B 3 15.162 48.023 27.677 1.00 39.33 N
ATOM 17 C5 A B 3 15.810 48.851 28.581 1.00 39.54 C
ATOM 18 C6 A B 3 17.072 49.467 28.564 1.00 39.34 C
ATOM 19 N6 A B 3 17.951 49.344 27.565 1.00 37.84 N
ATOM 20 N1 A B 3 17.408 50.229 29.627 1.00 39.98 N
ATOM 21 C2 A B 3 16.528 50.359 30.630 1.00 38.69 C
ATOM 22 N3 A B 3 15.321 49.832 30.762 1.00 38.10 N
ATOM 23 C4 A B 3 15.016 49.080 29.692 1.00 40.85 C
ATOM 24 P U B 4 9.755 51.746 28.545 1.00 48.24 P
ATOM 25 OP1 U B 4 8.488 52.432 28.919 1.00 49.25 O
ATOM 26 OP2 U B 4 9.944 51.239 27.161 1.00 46.21 O
ATOM 27 O5' U B 4 10.983 52.702 28.892 1.00 47.72 O
TER

Atoms:
OP1: (11.909,40.803,23.846)
OP2: (14.245,41.867,24.019)
C3': (11.192,43.567,27.733)
C1': (12.664,43.220,29.540)
C5': (11.613,41.231,26.728)
O6: (17.769,46.350,29.517)
O4': (12.541,42.007,28.816)
C8: (14.787,43.573,28.173)
C2: (14.978,46.137,31.704)
C6: (16.678,45.964,29.944)
C5: (15.790,45.017,29.375)
C4: (14.613,44.736,30.033)
P: (13.155,41.052,24.621)
C4': (11.374,42.075,27.956)
C2': (11.507,44.123,29.114)
O2': (10.429,43.982,30.016)
N1: (16.178,46.482,31.134)
N2: (14.649,46.765,32.842)
N3: (14.150,45.248,31.192)
N7: (15.889,44.275,28.203)
N9: (13.968,43.811,29.253)
O5': (12.736,41.717,26.006)
O3': (9.861,43.879,27.355)
OP1: (8.031,45.443,26.630)
OP2: (10.461,45.794,25.859)
C3': (11.029,49.624,29.353)
C1': (12.704,48.332,30.378)
C5': (10.062,47.643,28.094)
O4': (11.747,47.440,29.823)
C8: (14.009,47.772,28.251)
O2': (11.390,49.817,31.769)
C6: (17.072,49.467,28.564)
C5: (15.810,48.851,28.581)
C4: (15.016,49.080,29.692)
P: (9.493,45.378,26.905)
C4': (10.566,48.180,29.410)
C2': (12.018,49.692,30.508)
C2: (16.528,50.359,30.630)
N1: (17.408,50.229,29.627)
N3: (15.321,49.832,30.762)
N6: (17.951,49.344,27.565)
N7: (15.162,48.023,27.677)
N9: (13.854,48.383,29.473)
O5': (9.777,46.255,28.204)
O3': (9.933,50.502,29.533)
Image (generated by PyMOL):
PyMOL image
show in jmol