ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2QUW:D38:D25

Extra

PDB:
ATOM 1 O3' C A 37 3.621 -41.752 18.318 1.00 68.47 O
ATOM 2 P A A 38 3.830 -40.950 16.958 1.00 69.89 P
ATOM 3 OP1 A A 38 3.385 -41.760 15.799 1.00 70.24 O
ATOM 4 OP2 A A 38 5.230 -40.471 16.982 1.00 70.66 O
ATOM 5 O5' A A 38 2.853 -39.693 17.079 1.00 70.62 O
ATOM 6 C5' A A 38 1.458 -39.771 17.363 1.00 70.19 C
ATOM 7 C4' A A 38 1.027 -38.425 17.922 1.00 69.74 C
ATOM 8 O4' A A 38 1.750 -38.128 19.133 1.00 69.52 O
ATOM 9 C3' A A 38 1.406 -37.244 17.056 1.00 70.40 C
ATOM 10 O3' A A 38 0.477 -37.134 16.000 1.00 71.32 O
ATOM 11 C2' A A 38 1.370 -36.070 18.041 1.00 70.34 C
ATOM 12 O2' A A 38 0.074 -35.604 18.375 1.00 70.54 O
ATOM 13 C1' A A 38 1.975 -36.729 19.267 1.00 67.89 C
ATOM 14 N9 A A 38 3.412 -36.511 19.461 1.00 67.10 N
ATOM 15 C8 A A 38 4.409 -37.390 19.141 1.00 66.06 C
ATOM 16 N7 A A 38 5.613 -36.974 19.440 1.00 65.41 N
ATOM 17 C5 A A 38 5.398 -35.734 20.002 1.00 65.80 C
ATOM 18 C6 A A 38 6.291 -34.782 20.534 1.00 66.31 C
ATOM 19 N6 A A 38 7.618 -34.964 20.562 1.00 65.92 N
ATOM 20 N1 A A 38 5.756 -33.639 21.030 1.00 66.46 N
ATOM 21 C2 A A 38 4.424 -33.467 20.991 1.00 66.03 C
ATOM 22 N3 A A 38 3.486 -34.289 20.517 1.00 66.31 N
ATOM 23 C4 A A 38 4.042 -35.424 20.032 1.00 66.63 C
ATOM 24 P A A 39 0.904 -36.468 14.620 1.00 71.10 P
ATOM 25 OP1 A A 39 0.664 -37.468 13.558 1.00 71.60 O
ATOM 26 OP2 A A 39 2.251 -35.851 14.734 1.00 71.44 O
ATOM 27 O5' A A 39 -0.197 -35.297 14.554 1.00 70.14 O
TER

ATOM 1 O3' G B 24 -0.586 -25.728 22.858 1.00 69.09 O
ATOM 2 P A B 25 -1.602 -26.160 24.014 1.00 71.05 P
ATOM 3 OP1 A B 25 -2.264 -24.925 24.493 1.00 71.54 O
ATOM 4 OP2 A B 25 -0.844 -27.021 24.948 1.00 71.42 O
ATOM 5 O5' A B 25 -2.709 -27.090 23.308 1.00 70.95 O
ATOM 6 C5' A B 25 -3.737 -26.541 22.475 1.00 70.71 C
ATOM 7 C4' A B 25 -4.559 -27.632 21.807 1.00 71.31 C
ATOM 8 O4' A B 25 -3.919 -28.071 20.574 1.00 71.33 O
ATOM 9 C3' A B 25 -4.731 -28.917 22.605 1.00 72.33 C
ATOM 10 O3' A B 25 -5.876 -28.854 23.421 1.00 75.86 O
ATOM 11 C2' A B 25 -4.927 -29.944 21.505 1.00 70.98 C
ATOM 12 O2' A B 25 -6.214 -29.843 20.935 1.00 70.70 O
ATOM 13 C1' A B 25 -3.863 -29.492 20.520 1.00 70.40 C
ATOM 14 N9 A B 25 -2.500 -29.976 20.809 1.00 70.22 N
ATOM 15 C8 A B 25 -1.502 -29.288 21.451 1.00 70.56 C
ATOM 16 N7 A B 25 -0.370 -29.942 21.575 1.00 70.72 N
ATOM 17 C5 A B 25 -0.640 -31.154 20.978 1.00 69.95 C
ATOM 18 C6 A B 25 0.166 -32.289 20.785 1.00 70.12 C
ATOM 19 N6 A B 25 1.432 -32.349 21.216 1.00 70.17 N
ATOM 20 N1 A B 25 -0.382 -33.350 20.152 1.00 69.92 N
ATOM 21 C2 A B 25 -1.658 -33.263 19.744 1.00 70.42 C
ATOM 22 N3 A B 25 -2.510 -32.243 19.872 1.00 70.40 N
ATOM 23 C4 A B 25 -1.941 -31.203 20.505 1.00 69.84 C
ATOM 24 P G B 26 -5.872 -29.654 24.810 1.00 78.85 P
ATOM 25 OP1 G B 26 -7.184 -29.371 25.454 1.00 77.84 O
ATOM 26 OP2 G B 26 -4.583 -29.341 25.497 1.00 76.92 O
ATOM 27 O5' G B 26 -5.886 -31.203 24.378 1.00 77.26 O
TER

Atoms:
OP1: (3.385,-41.760,15.799)
OP2: (5.230,-40.471,16.982)
C3': (1.406,-37.244,17.056)
C1': (1.975,-36.729,19.267)
C5': (1.458,-39.771,17.363)
O4': (1.750,-38.128,19.133)
C8: (4.409,-37.390,19.141)
O2': (0.074,-35.604,18.375)
C6: (6.291,-34.782,20.534)
C5: (5.398,-35.734,20.002)
C4: (4.042,-35.424,20.032)
P: (3.830,-40.950,16.958)
C4': (1.027,-38.425,17.922)
C2': (1.370,-36.070,18.041)
C2: (4.424,-33.467,20.991)
N1: (5.756,-33.639,21.030)
N3: (3.486,-34.289,20.517)
N6: (7.618,-34.964,20.562)
N7: (5.613,-36.974,19.440)
N9: (3.412,-36.511,19.461)
O5': (2.853,-39.693,17.079)
O3': (0.477,-37.134,16.000)
OP1: (-2.264,-24.925,24.493)
OP2: (-0.844,-27.021,24.948)
C3': (-4.731,-28.917,22.605)
C1': (-3.863,-29.492,20.520)
C5': (-3.737,-26.541,22.475)
O4': (-3.919,-28.071,20.574)
C8: (-1.502,-29.288,21.451)
O2': (-6.214,-29.843,20.935)
C6: (0.166,-32.289,20.785)
C5: (-0.640,-31.154,20.978)
C4: (-1.941,-31.203,20.505)
P: (-1.602,-26.160,24.014)
C4': (-4.559,-27.632,21.807)
C2': (-4.927,-29.944,21.505)
C2: (-1.658,-33.263,19.744)
N1: (-0.382,-33.350,20.152)
N3: (-2.510,-32.243,19.872)
N6: (1.432,-32.349,21.216)
N7: (-0.370,-29.942,21.575)
N9: (-2.500,-29.976,20.809)
O5': (-2.709,-27.090,23.308)
O3': (-5.876,-28.854,23.421)
Image (generated by PyMOL):
PyMOL image
show in jmol