Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2RD2:B18:B12
Extra
PDB:
ATOM 1 O3' U A 17 5.468 28.641 31.509 1.00142.24 O
ATOM 2 P A A 18 5.388 27.207 30.789 1.00122.38 P
ATOM 3 OP1 A A 18 4.343 27.272 29.733 1.00 99.55 O
ATOM 4 OP2 A A 18 5.318 26.155 31.837 1.00100.59 O
ATOM 5 O5' A A 18 6.799 27.073 30.069 1.00122.78 O
ATOM 6 C5' A A 18 7.346 25.795 29.789 1.00119.30 C
ATOM 7 C4' A A 18 8.709 25.937 29.164 1.00113.73 C
ATOM 8 O4' A A 18 9.608 26.610 30.079 1.00110.84 O
ATOM 9 C3' A A 18 9.400 24.621 28.875 1.00109.38 C
ATOM 10 O3' A A 18 8.965 24.142 27.615 1.00108.36 O
ATOM 11 C2' A A 18 10.870 25.015 28.832 1.00111.24 C
ATOM 12 O2' A A 18 11.238 25.523 27.565 1.00115.54 O
ATOM 13 C1' A A 18 10.926 26.132 29.878 1.00108.63 C
ATOM 14 N9 A A 18 11.483 25.739 31.171 1.00 80.17 N
ATOM 15 C8 A A 18 10.833 25.185 32.244 1.00 82.15 C
ATOM 16 N7 A A 18 11.606 24.984 33.283 1.00 80.27 N
ATOM 17 C5 A A 18 12.852 25.428 32.864 1.00 78.43 C
ATOM 18 C6 A A 18 14.101 25.491 33.507 1.00 78.17 C
ATOM 19 N6 A A 18 14.308 25.102 34.765 1.00 81.87 N
ATOM 20 N1 A A 18 15.146 25.977 32.803 1.00 77.91 N
ATOM 21 C2 A A 18 14.938 26.373 31.542 1.00 76.19 C
ATOM 22 N3 A A 18 13.813 26.372 30.832 1.00 74.54 N
ATOM 23 C4 A A 18 12.794 25.882 31.560 1.00 77.64 C
ATOM 24 P A A 19 9.393 22.679 27.137 1.00103.20 P
ATOM 25 OP1 A A 19 8.209 22.027 26.520 1.00105.62 O
ATOM 26 OP2 A A 19 10.072 22.033 28.292 1.00108.79 O
ATOM 27 O5' A A 19 10.477 22.959 26.003 1.00100.26 O
TER
ATOM 1 O3' A B 11 23.401 26.209 21.662 1.00 49.85 O
ATOM 2 P A B 12 22.668 27.633 21.573 1.00 47.66 P
ATOM 3 OP1 A B 12 23.227 28.375 20.412 1.00 43.26 O
ATOM 4 OP2 A B 12 22.680 28.252 22.930 1.00 42.76 O
ATOM 5 O5' A B 12 21.165 27.255 21.219 1.00 56.89 O
ATOM 6 C5' A B 12 20.112 28.190 21.399 1.00 61.52 C
ATOM 7 C4' A B 12 18.785 27.517 21.145 1.00 65.00 C
ATOM 8 O4' A B 12 18.600 26.433 22.091 1.00 63.57 O
ATOM 9 C3' A B 12 17.567 28.399 21.339 1.00 65.06 C
ATOM 10 O3' A B 12 17.326 29.129 20.142 1.00 66.13 O
ATOM 11 C2' A B 12 16.468 27.376 21.600 1.00 64.94 C
ATOM 12 O2' A B 12 15.960 26.815 20.407 1.00 72.21 O
ATOM 13 C1' A B 12 17.223 26.302 22.389 1.00 62.86 C
ATOM 14 N9 A B 12 17.051 26.404 23.835 1.00 58.93 N
ATOM 15 C8 A B 12 18.012 26.588 24.798 1.00 60.55 C
ATOM 16 N7 A B 12 17.537 26.630 26.019 1.00 66.79 N
ATOM 17 C5 A B 12 16.169 26.464 25.849 1.00 65.86 C
ATOM 18 C6 A B 12 15.095 26.415 26.762 1.00 65.30 C
ATOM 19 N6 A B 12 15.236 26.523 28.087 1.00 66.54 N
ATOM 20 N1 A B 12 13.854 26.243 26.257 1.00 64.68 N
ATOM 21 C2 A B 12 13.710 26.122 24.928 1.00 64.86 C
ATOM 22 N3 A B 12 14.636 26.147 23.975 1.00 65.64 N
ATOM 23 C4 A B 12 15.858 26.325 24.507 1.00 64.33 C
ATOM 24 P G B 13 17.463 30.725 20.147 1.00 79.90 P
ATOM 25 OP1 G B 13 17.186 31.218 18.776 1.00 74.06 O
ATOM 26 OP2 G B 13 18.744 31.068 20.810 1.00 70.87 O
ATOM 27 O5' G B 13 16.282 31.188 21.104 1.00 84.13 O
TER
ATOM 2 P A A 18 5.388 27.207 30.789 1.00122.38 P
ATOM 3 OP1 A A 18 4.343 27.272 29.733 1.00 99.55 O
ATOM 4 OP2 A A 18 5.318 26.155 31.837 1.00100.59 O
ATOM 5 O5' A A 18 6.799 27.073 30.069 1.00122.78 O
ATOM 6 C5' A A 18 7.346 25.795 29.789 1.00119.30 C
ATOM 7 C4' A A 18 8.709 25.937 29.164 1.00113.73 C
ATOM 8 O4' A A 18 9.608 26.610 30.079 1.00110.84 O
ATOM 9 C3' A A 18 9.400 24.621 28.875 1.00109.38 C
ATOM 10 O3' A A 18 8.965 24.142 27.615 1.00108.36 O
ATOM 11 C2' A A 18 10.870 25.015 28.832 1.00111.24 C
ATOM 12 O2' A A 18 11.238 25.523 27.565 1.00115.54 O
ATOM 13 C1' A A 18 10.926 26.132 29.878 1.00108.63 C
ATOM 14 N9 A A 18 11.483 25.739 31.171 1.00 80.17 N
ATOM 15 C8 A A 18 10.833 25.185 32.244 1.00 82.15 C
ATOM 16 N7 A A 18 11.606 24.984 33.283 1.00 80.27 N
ATOM 17 C5 A A 18 12.852 25.428 32.864 1.00 78.43 C
ATOM 18 C6 A A 18 14.101 25.491 33.507 1.00 78.17 C
ATOM 19 N6 A A 18 14.308 25.102 34.765 1.00 81.87 N
ATOM 20 N1 A A 18 15.146 25.977 32.803 1.00 77.91 N
ATOM 21 C2 A A 18 14.938 26.373 31.542 1.00 76.19 C
ATOM 22 N3 A A 18 13.813 26.372 30.832 1.00 74.54 N
ATOM 23 C4 A A 18 12.794 25.882 31.560 1.00 77.64 C
ATOM 24 P A A 19 9.393 22.679 27.137 1.00103.20 P
ATOM 25 OP1 A A 19 8.209 22.027 26.520 1.00105.62 O
ATOM 26 OP2 A A 19 10.072 22.033 28.292 1.00108.79 O
ATOM 27 O5' A A 19 10.477 22.959 26.003 1.00100.26 O
TER
ATOM 1 O3' A B 11 23.401 26.209 21.662 1.00 49.85 O
ATOM 2 P A B 12 22.668 27.633 21.573 1.00 47.66 P
ATOM 3 OP1 A B 12 23.227 28.375 20.412 1.00 43.26 O
ATOM 4 OP2 A B 12 22.680 28.252 22.930 1.00 42.76 O
ATOM 5 O5' A B 12 21.165 27.255 21.219 1.00 56.89 O
ATOM 6 C5' A B 12 20.112 28.190 21.399 1.00 61.52 C
ATOM 7 C4' A B 12 18.785 27.517 21.145 1.00 65.00 C
ATOM 8 O4' A B 12 18.600 26.433 22.091 1.00 63.57 O
ATOM 9 C3' A B 12 17.567 28.399 21.339 1.00 65.06 C
ATOM 10 O3' A B 12 17.326 29.129 20.142 1.00 66.13 O
ATOM 11 C2' A B 12 16.468 27.376 21.600 1.00 64.94 C
ATOM 12 O2' A B 12 15.960 26.815 20.407 1.00 72.21 O
ATOM 13 C1' A B 12 17.223 26.302 22.389 1.00 62.86 C
ATOM 14 N9 A B 12 17.051 26.404 23.835 1.00 58.93 N
ATOM 15 C8 A B 12 18.012 26.588 24.798 1.00 60.55 C
ATOM 16 N7 A B 12 17.537 26.630 26.019 1.00 66.79 N
ATOM 17 C5 A B 12 16.169 26.464 25.849 1.00 65.86 C
ATOM 18 C6 A B 12 15.095 26.415 26.762 1.00 65.30 C
ATOM 19 N6 A B 12 15.236 26.523 28.087 1.00 66.54 N
ATOM 20 N1 A B 12 13.854 26.243 26.257 1.00 64.68 N
ATOM 21 C2 A B 12 13.710 26.122 24.928 1.00 64.86 C
ATOM 22 N3 A B 12 14.636 26.147 23.975 1.00 65.64 N
ATOM 23 C4 A B 12 15.858 26.325 24.507 1.00 64.33 C
ATOM 24 P G B 13 17.463 30.725 20.147 1.00 79.90 P
ATOM 25 OP1 G B 13 17.186 31.218 18.776 1.00 74.06 O
ATOM 26 OP2 G B 13 18.744 31.068 20.810 1.00 70.87 O
ATOM 27 O5' G B 13 16.282 31.188 21.104 1.00 84.13 O
TER
Atoms:
OP1: (4.343,27.272,29.733)
OP2: (5.318,26.155,31.837)
C3': (9.400,24.621,28.875)
C1': (10.926,26.132,29.878)
C5': (7.346,25.795,29.789)
O4': (9.608,26.610,30.079)
C8: (10.833,25.185,32.244)
O2': (11.238,25.523,27.565)
C6: (14.101,25.491,33.507)
C5: (12.852,25.428,32.864)
C4: (12.794,25.882,31.560)
P: (5.388,27.207,30.789)
C4': (8.709,25.937,29.164)
C2': (10.870,25.015,28.832)
C2: (14.938,26.373,31.542)
N1: (15.146,25.977,32.803)
N3: (13.813,26.372,30.832)
N6: (14.308,25.102,34.765)
N7: (11.606,24.984,33.283)
N9: (11.483,25.739,31.171)
O5': (6.799,27.073,30.069)
O3': (8.965,24.142,27.615)
OP2: (5.318,26.155,31.837)
C3': (9.400,24.621,28.875)
C1': (10.926,26.132,29.878)
C5': (7.346,25.795,29.789)
O4': (9.608,26.610,30.079)
C8: (10.833,25.185,32.244)
O2': (11.238,25.523,27.565)
C6: (14.101,25.491,33.507)
C5: (12.852,25.428,32.864)
C4: (12.794,25.882,31.560)
P: (5.388,27.207,30.789)
C4': (8.709,25.937,29.164)
C2': (10.870,25.015,28.832)
C2: (14.938,26.373,31.542)
N1: (15.146,25.977,32.803)
N3: (13.813,26.372,30.832)
N6: (14.308,25.102,34.765)
N7: (11.606,24.984,33.283)
N9: (11.483,25.739,31.171)
O5': (6.799,27.073,30.069)
O3': (8.965,24.142,27.615)
OP1: (23.227,28.375,20.412)
OP2: (22.680,28.252,22.930)
C3': (17.567,28.399,21.339)
C1': (17.223,26.302,22.389)
C5': (20.112,28.190,21.399)
O4': (18.600,26.433,22.091)
C8: (18.012,26.588,24.798)
O2': (15.960,26.815,20.407)
C6: (15.095,26.415,26.762)
C5: (16.169,26.464,25.849)
C4: (15.858,26.325,24.507)
P: (22.668,27.633,21.573)
C4': (18.785,27.517,21.145)
C2': (16.468,27.376,21.600)
C2: (13.710,26.122,24.928)
N1: (13.854,26.243,26.257)
N3: (14.636,26.147,23.975)
N6: (15.236,26.523,28.087)
N7: (17.537,26.630,26.019)
N9: (17.051,26.404,23.835)
O5': (21.165,27.255,21.219)
O3': (17.326,29.129,20.142)
OP2: (22.680,28.252,22.930)
C3': (17.567,28.399,21.339)
C1': (17.223,26.302,22.389)
C5': (20.112,28.190,21.399)
O4': (18.600,26.433,22.091)
C8: (18.012,26.588,24.798)
O2': (15.960,26.815,20.407)
C6: (15.095,26.415,26.762)
C5: (16.169,26.464,25.849)
C4: (15.858,26.325,24.507)
P: (22.668,27.633,21.573)
C4': (18.785,27.517,21.145)
C2': (16.468,27.376,21.600)
C2: (13.710,26.122,24.928)
N1: (13.854,26.243,26.257)
N3: (14.636,26.147,23.975)
N6: (15.236,26.523,28.087)
N7: (17.537,26.630,26.019)
N9: (17.051,26.404,23.835)
O5': (21.165,27.255,21.219)
O3': (17.326,29.129,20.142)
Image (generated by PyMOL):