ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2RE8:B18:B12

Extra

PDB:
ATOM 1 O3' U A 17 5.821 28.910 31.702 1.00118.41 O
ATOM 2 P A A 18 5.741 27.477 30.974 1.00112.36 P
ATOM 3 OP1 A A 18 4.879 27.608 29.766 1.00115.61 O
ATOM 4 OP2 A A 18 5.430 26.440 31.994 1.00116.65 O
ATOM 5 O5' A A 18 7.236 27.225 30.493 1.00112.76 O
ATOM 6 C5' A A 18 7.676 25.922 30.140 1.00109.28 C
ATOM 7 C4' A A 18 9.045 25.989 29.513 1.00103.71 C
ATOM 8 O4' A A 18 9.989 26.546 30.458 1.00100.82 O
ATOM 9 C3' A A 18 9.643 24.646 29.138 1.00 99.36 C
ATOM 10 O3' A A 18 9.187 24.281 27.843 1.00 98.34 O
ATOM 11 C2' A A 18 11.140 24.936 29.125 1.00101.22 C
ATOM 12 O2' A A 18 11.568 25.487 27.896 1.00105.52 O
ATOM 13 C1' A A 18 11.270 25.993 30.224 1.00 98.61 C
ATOM 14 N9 A A 18 11.799 25.494 31.490 1.00 96.23 N
ATOM 15 C8 A A 18 11.157 24.757 32.452 1.00 98.21 C
ATOM 16 N7 A A 18 11.900 24.498 33.500 1.00 96.33 N
ATOM 17 C5 A A 18 13.116 25.100 33.204 1.00 94.49 C
ATOM 18 C6 A A 18 14.325 25.196 33.916 1.00 94.23 C
ATOM 19 N6 A A 18 14.514 24.673 35.131 1.00 97.93 N
ATOM 20 N1 A A 18 15.347 25.855 33.331 1.00 93.97 N
ATOM 21 C2 A A 18 15.156 26.381 32.117 1.00 92.25 C
ATOM 22 N3 A A 18 14.067 26.367 31.353 1.00 90.60 N
ATOM 23 C4 A A 18 13.070 25.704 31.963 1.00 93.70 C
ATOM 24 P A A 19 9.460 22.802 27.295 1.00 99.01 P
ATOM 25 OP1 A A 19 8.174 22.249 26.805 1.00 97.97 O
ATOM 26 OP2 A A 19 10.214 22.084 28.356 1.00101.14 O
ATOM 27 O5' A A 19 10.424 23.024 26.044 1.00 96.07 O
TER

ATOM 1 O3' A B 11 23.421 26.160 21.867 1.00 46.44 O
ATOM 2 P A B 12 22.724 27.604 21.778 1.00 44.78 P
ATOM 3 OP1 A B 12 23.352 28.322 20.639 1.00 43.80 O
ATOM 4 OP2 A B 12 22.726 28.217 23.128 1.00 43.30 O
ATOM 5 O5' A B 12 21.229 27.257 21.357 1.00 54.01 O
ATOM 6 C5' A B 12 20.199 28.231 21.417 1.00 58.64 C
ATOM 7 C4' A B 12 18.866 27.586 21.121 1.00 62.12 C
ATOM 8 O4' A B 12 18.655 26.469 22.018 1.00 60.69 O
ATOM 9 C3' A B 12 17.660 28.477 21.336 1.00 62.18 C
ATOM 10 O3' A B 12 17.435 29.237 20.164 1.00 63.25 O
ATOM 11 C2' A B 12 16.547 27.465 21.560 1.00 62.06 C
ATOM 12 O2' A B 12 16.071 26.926 20.348 1.00 69.33 O
ATOM 13 C1' A B 12 17.281 26.369 22.330 1.00 59.98 C
ATOM 14 N9 A B 12 17.133 26.455 23.780 1.00 59.47 N
ATOM 15 C8 A B 12 18.113 26.591 24.730 1.00 61.09 C
ATOM 16 N7 A B 12 17.659 26.590 25.959 1.00 67.33 N
ATOM 17 C5 A B 12 16.286 26.452 25.806 1.00 66.40 C
ATOM 18 C6 A B 12 15.229 26.373 26.733 1.00 65.84 C
ATOM 19 N6 A B 12 15.395 26.397 28.059 1.00 67.08 N
ATOM 20 N1 A B 12 13.976 26.257 26.242 1.00 65.22 N
ATOM 21 C2 A B 12 13.807 26.211 24.916 1.00 65.40 C
ATOM 22 N3 A B 12 14.717 26.262 23.950 1.00 66.18 N
ATOM 23 C4 A B 12 15.950 26.384 24.468 1.00 64.87 C
ATOM 24 P G B 13 17.680 30.818 20.192 1.00 68.33 P
ATOM 25 OP1 G B 13 17.593 31.332 18.803 1.00 72.18 O
ATOM 26 OP2 G B 13 18.899 31.068 20.997 1.00 68.99 O
ATOM 27 O5' G B 13 16.432 31.355 21.012 1.00 72.56 O
TER

Atoms:
OP1: (4.879,27.608,29.766)
OP2: (5.430,26.440,31.994)
C3': (9.643,24.646,29.138)
C1': (11.270,25.993,30.224)
C5': (7.676,25.922,30.140)
O4': (9.989,26.546,30.458)
C8: (11.157,24.757,32.452)
O2': (11.568,25.487,27.896)
C6: (14.325,25.196,33.916)
C5: (13.116,25.100,33.204)
C4: (13.070,25.704,31.963)
P: (5.741,27.477,30.974)
C4': (9.045,25.989,29.513)
C2': (11.140,24.936,29.125)
C2: (15.156,26.381,32.117)
N1: (15.347,25.855,33.331)
N3: (14.067,26.367,31.353)
N6: (14.514,24.673,35.131)
N7: (11.900,24.498,33.500)
N9: (11.799,25.494,31.490)
O5': (7.236,27.225,30.493)
O3': (9.187,24.281,27.843)
OP1: (23.352,28.322,20.639)
OP2: (22.726,28.217,23.128)
C3': (17.660,28.477,21.336)
C1': (17.281,26.369,22.330)
C5': (20.199,28.231,21.417)
O4': (18.655,26.469,22.018)
C8: (18.113,26.591,24.730)
O2': (16.071,26.926,20.348)
C6: (15.229,26.373,26.733)
C5: (16.286,26.452,25.806)
C4: (15.950,26.384,24.468)
P: (22.724,27.604,21.778)
C4': (18.866,27.586,21.121)
C2': (16.547,27.465,21.560)
C2: (13.807,26.211,24.916)
N1: (13.976,26.257,26.242)
N3: (14.717,26.262,23.950)
N6: (15.395,26.397,28.059)
N7: (17.659,26.590,25.959)
N9: (17.133,26.455,23.780)
O5': (21.229,27.257,21.357)
O3': (17.435,29.237,20.164)
Image (generated by PyMOL):
PyMOL image
show in jmol