Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0658:0659
Extra
PDB:
ATOM 1 O3' G A 657 37.586 107.704 17.283 1.00 62.96 O
ATOM 2 P G A 658 36.898 109.129 17.567 1.00 65.25 P
ATOM 3 OP1 G A 658 36.690 109.788 16.254 1.00 66.33 O
ATOM 4 OP2 G A 658 37.670 109.829 18.624 1.00 66.98 O
ATOM 5 O5' G A 658 35.474 108.780 18.186 1.00 64.28 O
ATOM 6 C5' G A 658 34.516 108.014 17.454 1.00 63.71 C
ATOM 7 C4' G A 658 33.324 107.733 18.323 1.00 64.82 C
ATOM 8 O4' G A 658 33.732 106.939 19.462 1.00 65.86 O
ATOM 9 C3' G A 658 32.693 108.965 18.941 1.00 65.34 C
ATOM 10 O3' G A 658 31.786 109.546 18.021 1.00 66.93 O
ATOM 11 C2' G A 658 31.978 108.393 20.156 1.00 66.07 C
ATOM 12 O2' G A 658 30.733 107.810 19.838 1.00 65.75 O
ATOM 13 C1' G A 658 32.950 107.294 20.590 1.00 67.19 C
ATOM 14 N9 G A 658 33.839 107.698 21.675 1.00 69.87 N
ATOM 15 C8 G A 658 35.192 107.942 21.610 1.00 71.27 C
ATOM 16 N7 G A 658 35.703 108.297 22.758 1.00 71.48 N
ATOM 17 C5 G A 658 34.623 108.285 23.632 1.00 71.20 C
ATOM 18 C6 G A 658 34.557 108.584 25.013 1.00 71.24 C
ATOM 19 O6 G A 658 35.468 108.937 25.769 1.00 73.02 O
ATOM 20 N1 G A 658 33.265 108.444 25.506 1.00 71.15 N
ATOM 21 C2 G A 658 32.174 108.069 24.767 1.00 71.42 C
ATOM 22 N2 G A 658 31.004 108.003 25.422 1.00 71.03 N
ATOM 23 N3 G A 658 32.222 107.784 23.479 1.00 71.98 N
ATOM 24 C4 G A 658 33.469 107.913 22.980 1.00 70.89 C
ATOM 25 P A A 659 31.483 111.114 18.081 1.00 68.26 P
ATOM 26 OP1 A A 659 30.451 111.403 17.051 1.00 68.90 O
ATOM 27 OP2 A A 659 32.793 111.821 18.036 1.00 70.75 O
ATOM 28 O5' A A 659 30.816 111.331 19.509 1.00 68.02 O
TER
ATOM 1 O3' G B 658 31.786 109.546 18.021 1.00 66.93 O
ATOM 2 P A B 659 31.483 111.114 18.081 1.00 68.26 P
ATOM 3 OP1 A B 659 30.451 111.403 17.051 1.00 68.90 O
ATOM 4 OP2 A B 659 32.793 111.821 18.036 1.00 70.75 O
ATOM 5 O5' A B 659 30.816 111.331 19.509 1.00 68.02 O
ATOM 6 C5' A B 659 29.538 110.748 19.828 1.00 67.67 C
ATOM 7 C4' A B 659 29.212 110.991 21.279 1.00 67.61 C
ATOM 8 O4' A B 659 30.128 110.241 22.115 1.00 67.33 O
ATOM 9 C3' A B 659 29.352 112.439 21.718 1.00 66.07 C
ATOM 10 O3' A B 659 28.123 113.110 21.451 1.00 67.29 O
ATOM 11 C2' A B 659 29.663 112.304 23.200 1.00 66.10 C
ATOM 12 O2' A B 659 28.503 112.076 23.967 1.00 67.38 O
ATOM 13 C1' A B 659 30.516 111.032 23.220 1.00 66.14 C
ATOM 14 N9 A B 659 31.956 111.256 23.116 1.00 66.44 N
ATOM 15 C8 A B 659 32.723 111.259 21.977 1.00 66.64 C
ATOM 16 N7 A B 659 33.997 111.470 22.196 1.00 67.46 N
ATOM 17 C5 A B 659 34.076 111.620 23.573 1.00 67.88 C
ATOM 18 C6 A B 659 35.158 111.860 24.438 1.00 68.46 C
ATOM 19 N6 A B 659 36.424 111.984 24.024 1.00 69.02 N
ATOM 20 N1 A B 659 34.895 111.964 25.759 1.00 67.85 N
ATOM 21 C2 A B 659 33.632 111.821 26.173 1.00 67.12 C
ATOM 22 N3 A B 659 32.533 111.584 25.461 1.00 66.81 N
ATOM 23 C4 A B 659 32.826 111.495 24.152 1.00 67.35 C
ATOM 24 P G B 660 27.996 114.702 21.650 1.00 68.43 P
ATOM 25 OP1 G B 660 26.960 115.177 20.697 1.00 68.34 O
ATOM 26 OP2 G B 660 29.353 115.318 21.630 1.00 68.04 O
ATOM 27 O5' G B 660 27.363 114.842 23.103 1.00 67.78 O
TER
ATOM 2 P G A 658 36.898 109.129 17.567 1.00 65.25 P
ATOM 3 OP1 G A 658 36.690 109.788 16.254 1.00 66.33 O
ATOM 4 OP2 G A 658 37.670 109.829 18.624 1.00 66.98 O
ATOM 5 O5' G A 658 35.474 108.780 18.186 1.00 64.28 O
ATOM 6 C5' G A 658 34.516 108.014 17.454 1.00 63.71 C
ATOM 7 C4' G A 658 33.324 107.733 18.323 1.00 64.82 C
ATOM 8 O4' G A 658 33.732 106.939 19.462 1.00 65.86 O
ATOM 9 C3' G A 658 32.693 108.965 18.941 1.00 65.34 C
ATOM 10 O3' G A 658 31.786 109.546 18.021 1.00 66.93 O
ATOM 11 C2' G A 658 31.978 108.393 20.156 1.00 66.07 C
ATOM 12 O2' G A 658 30.733 107.810 19.838 1.00 65.75 O
ATOM 13 C1' G A 658 32.950 107.294 20.590 1.00 67.19 C
ATOM 14 N9 G A 658 33.839 107.698 21.675 1.00 69.87 N
ATOM 15 C8 G A 658 35.192 107.942 21.610 1.00 71.27 C
ATOM 16 N7 G A 658 35.703 108.297 22.758 1.00 71.48 N
ATOM 17 C5 G A 658 34.623 108.285 23.632 1.00 71.20 C
ATOM 18 C6 G A 658 34.557 108.584 25.013 1.00 71.24 C
ATOM 19 O6 G A 658 35.468 108.937 25.769 1.00 73.02 O
ATOM 20 N1 G A 658 33.265 108.444 25.506 1.00 71.15 N
ATOM 21 C2 G A 658 32.174 108.069 24.767 1.00 71.42 C
ATOM 22 N2 G A 658 31.004 108.003 25.422 1.00 71.03 N
ATOM 23 N3 G A 658 32.222 107.784 23.479 1.00 71.98 N
ATOM 24 C4 G A 658 33.469 107.913 22.980 1.00 70.89 C
ATOM 25 P A A 659 31.483 111.114 18.081 1.00 68.26 P
ATOM 26 OP1 A A 659 30.451 111.403 17.051 1.00 68.90 O
ATOM 27 OP2 A A 659 32.793 111.821 18.036 1.00 70.75 O
ATOM 28 O5' A A 659 30.816 111.331 19.509 1.00 68.02 O
TER
ATOM 1 O3' G B 658 31.786 109.546 18.021 1.00 66.93 O
ATOM 2 P A B 659 31.483 111.114 18.081 1.00 68.26 P
ATOM 3 OP1 A B 659 30.451 111.403 17.051 1.00 68.90 O
ATOM 4 OP2 A B 659 32.793 111.821 18.036 1.00 70.75 O
ATOM 5 O5' A B 659 30.816 111.331 19.509 1.00 68.02 O
ATOM 6 C5' A B 659 29.538 110.748 19.828 1.00 67.67 C
ATOM 7 C4' A B 659 29.212 110.991 21.279 1.00 67.61 C
ATOM 8 O4' A B 659 30.128 110.241 22.115 1.00 67.33 O
ATOM 9 C3' A B 659 29.352 112.439 21.718 1.00 66.07 C
ATOM 10 O3' A B 659 28.123 113.110 21.451 1.00 67.29 O
ATOM 11 C2' A B 659 29.663 112.304 23.200 1.00 66.10 C
ATOM 12 O2' A B 659 28.503 112.076 23.967 1.00 67.38 O
ATOM 13 C1' A B 659 30.516 111.032 23.220 1.00 66.14 C
ATOM 14 N9 A B 659 31.956 111.256 23.116 1.00 66.44 N
ATOM 15 C8 A B 659 32.723 111.259 21.977 1.00 66.64 C
ATOM 16 N7 A B 659 33.997 111.470 22.196 1.00 67.46 N
ATOM 17 C5 A B 659 34.076 111.620 23.573 1.00 67.88 C
ATOM 18 C6 A B 659 35.158 111.860 24.438 1.00 68.46 C
ATOM 19 N6 A B 659 36.424 111.984 24.024 1.00 69.02 N
ATOM 20 N1 A B 659 34.895 111.964 25.759 1.00 67.85 N
ATOM 21 C2 A B 659 33.632 111.821 26.173 1.00 67.12 C
ATOM 22 N3 A B 659 32.533 111.584 25.461 1.00 66.81 N
ATOM 23 C4 A B 659 32.826 111.495 24.152 1.00 67.35 C
ATOM 24 P G B 660 27.996 114.702 21.650 1.00 68.43 P
ATOM 25 OP1 G B 660 26.960 115.177 20.697 1.00 68.34 O
ATOM 26 OP2 G B 660 29.353 115.318 21.630 1.00 68.04 O
ATOM 27 O5' G B 660 27.363 114.842 23.103 1.00 67.78 O
TER
Atoms:
OP1: (36.690,109.788,16.254)
OP2: (37.670,109.829,18.624)
C3': (32.693,108.965,18.941)
C1': (32.950,107.294,20.590)
C5': (34.516,108.014,17.454)
O6: (35.468,108.937,25.769)
O4': (33.732,106.939,19.462)
C8: (35.192,107.942,21.610)
C2: (32.174,108.069,24.767)
C6: (34.557,108.584,25.013)
C5: (34.623,108.285,23.632)
C4: (33.469,107.913,22.980)
P: (36.898,109.129,17.567)
C4': (33.324,107.733,18.323)
C2': (31.978,108.393,20.156)
O2': (30.733,107.810,19.838)
N1: (33.265,108.444,25.506)
N2: (31.004,108.003,25.422)
N3: (32.222,107.784,23.479)
N7: (35.703,108.297,22.758)
N9: (33.839,107.698,21.675)
O5': (35.474,108.780,18.186)
O3': (31.786,109.546,18.021)
OP2: (37.670,109.829,18.624)
C3': (32.693,108.965,18.941)
C1': (32.950,107.294,20.590)
C5': (34.516,108.014,17.454)
O6: (35.468,108.937,25.769)
O4': (33.732,106.939,19.462)
C8: (35.192,107.942,21.610)
C2: (32.174,108.069,24.767)
C6: (34.557,108.584,25.013)
C5: (34.623,108.285,23.632)
C4: (33.469,107.913,22.980)
P: (36.898,109.129,17.567)
C4': (33.324,107.733,18.323)
C2': (31.978,108.393,20.156)
O2': (30.733,107.810,19.838)
N1: (33.265,108.444,25.506)
N2: (31.004,108.003,25.422)
N3: (32.222,107.784,23.479)
N7: (35.703,108.297,22.758)
N9: (33.839,107.698,21.675)
O5': (35.474,108.780,18.186)
O3': (31.786,109.546,18.021)
OP1: (30.451,111.403,17.051)
OP2: (32.793,111.821,18.036)
C3': (29.352,112.439,21.718)
C1': (30.516,111.032,23.220)
C5': (29.538,110.748,19.828)
O4': (30.128,110.241,22.115)
C8: (32.723,111.259,21.977)
O2': (28.503,112.076,23.967)
C6: (35.158,111.860,24.438)
C5: (34.076,111.620,23.573)
C4: (32.826,111.495,24.152)
P: (31.483,111.114,18.081)
C4': (29.212,110.991,21.279)
C2': (29.663,112.304,23.200)
C2: (33.632,111.821,26.173)
N1: (34.895,111.964,25.759)
N3: (32.533,111.584,25.461)
N6: (36.424,111.984,24.024)
N7: (33.997,111.470,22.196)
N9: (31.956,111.256,23.116)
O5': (30.816,111.331,19.509)
O3': (28.123,113.110,21.451)
OP2: (32.793,111.821,18.036)
C3': (29.352,112.439,21.718)
C1': (30.516,111.032,23.220)
C5': (29.538,110.748,19.828)
O4': (30.128,110.241,22.115)
C8: (32.723,111.259,21.977)
O2': (28.503,112.076,23.967)
C6: (35.158,111.860,24.438)
C5: (34.076,111.620,23.573)
C4: (32.826,111.495,24.152)
P: (31.483,111.114,18.081)
C4': (29.212,110.991,21.279)
C2': (29.663,112.304,23.200)
C2: (33.632,111.821,26.173)
N1: (34.895,111.964,25.759)
N3: (32.533,111.584,25.461)
N6: (36.424,111.984,24.024)
N7: (33.997,111.470,22.196)
N9: (31.956,111.256,23.116)
O5': (30.816,111.331,19.509)
O3': (28.123,113.110,21.451)
Image (generated by PyMOL):