ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHK:B38:B45

Extra

PDB:
ATOM 1 O3' C A 37 96.419 -54.179-170.195 1.00113.32 O
ATOM 2 P A A 38 97.085 -54.707-171.563 1.00133.51 P
ATOM 3 OP1 A A 38 98.294 -53.889-171.804 1.00137.34 O
ATOM 4 OP2 A A 38 96.020 -54.719-172.592 1.00129.58 O
ATOM 5 O5' A A 38 97.504 -56.195-171.198 1.00107.50 O
ATOM 6 C5' A A 38 97.318 -57.253-172.122 1.00105.90 C
ATOM 7 C4' A A 38 96.521 -58.373-171.508 1.00106.37 C
ATOM 8 O4' A A 38 95.217 -57.874-171.107 1.00112.32 O
ATOM 9 C3' A A 38 96.206 -59.553-172.418 1.00107.90 C
ATOM 10 O3' A A 38 97.267 -60.481-172.508 1.00110.65 O
ATOM 11 C2' A A 38 94.955 -60.134-171.782 1.00111.44 C
ATOM 12 O2' A A 38 95.290 -60.891-170.625 1.00110.23 O
ATOM 13 C1' A A 38 94.234 -58.863-171.332 1.00111.30 C
ATOM 14 N9 A A 38 93.283 -58.364-172.353 1.00114.65 N
ATOM 15 C8 A A 38 93.062 -57.050-172.708 1.00110.26 C
ATOM 16 N7 A A 38 92.148 -56.896-173.633 1.00110.86 N
ATOM 17 C5 A A 38 91.730 -58.197-173.909 1.00118.01 C
ATOM 18 C6 A A 38 90.773 -58.721-174.805 1.00117.18 C
ATOM 19 N6 A A 38 90.036 -57.962-175.616 1.00117.54 N
ATOM 20 N1 A A 38 90.587 -60.062-174.845 1.00115.65 N
ATOM 21 C2 A A 38 91.320 -60.827-174.032 1.00113.69 C
ATOM 22 N3 A A 38 92.246 -60.458-173.147 1.00118.09 N
ATOM 23 C4 A A 38 92.414 -59.114-173.128 1.00118.81 C
ATOM 24 P U A 39 98.619 -60.078-173.259 1.00142.19 P
ATOM 25 OP1 U A 39 99.596 -59.680-172.209 1.00119.64 O
ATOM 26 OP2 U A 39 98.251 -59.093-174.305 1.00113.61 O
ATOM 27 O5' U A 39 99.076 -61.446-173.937 1.00164.37 O
TER

ATOM 1 O3' A B 44 88.847 -69.970-167.703 1.00 89.50 O
ATOM 2 P A B 45 88.533 -68.749-166.716 1.00115.64 P
ATOM 3 OP1 A B 45 87.821 -69.308-165.525 1.00108.36 O
ATOM 4 OP2 A B 45 87.857 -67.702-167.523 1.00113.18 O
ATOM 5 O5' A B 45 89.997 -68.261-166.308 1.00100.05 O
ATOM 6 C5' A B 45 91.057 -69.202-166.122 1.00 99.71 C
ATOM 7 C4' A B 45 92.365 -68.508-165.840 1.00 91.79 C
ATOM 8 O4' A B 45 93.128 -68.374-167.071 1.00 88.22 O
ATOM 9 C3' A B 45 92.240 -67.091-165.305 1.00 82.69 C
ATOM 10 O3' A B 45 92.078 -67.045-163.903 1.00 75.32 O
ATOM 11 C2' A B 45 93.508 -66.408-165.799 1.00 85.70 C
ATOM 12 O2' A B 45 94.605 -66.713-164.957 1.00 92.33 O
ATOM 13 C1' A B 45 93.725 -67.098-167.137 1.00 88.24 C
ATOM 14 N9 A B 45 93.100 -66.357-168.243 1.00 90.10 N
ATOM 15 C8 A B 45 91.921 -66.651-168.886 1.00 90.91 C
ATOM 16 N7 A B 45 91.625 -65.816-169.856 1.00 91.81 N
ATOM 17 C5 A B 45 92.679 -64.918-169.852 1.00 89.54 C
ATOM 18 C6 A B 45 92.954 -63.791-170.639 1.00 89.73 C
ATOM 19 N6 A B 45 92.168 -63.355-171.617 1.00 91.95 N
ATOM 20 N1 A B 45 94.086 -63.114-170.375 1.00 91.76 N
ATOM 21 C2 A B 45 94.878 -63.545-169.379 1.00 92.00 C
ATOM 22 N3 A B 45 94.729 -64.587-168.558 1.00 88.52 N
ATOM 23 C4 A B 45 93.595 -65.240-168.860 1.00 90.81 C
ATOM 24 P C B 46 91.812 -65.634-163.192 1.00 97.83 P
ATOM 25 OP1 C B 46 91.989 -65.824-161.725 1.00 77.91 O
ATOM 26 OP2 C B 46 90.510 -65.134-163.694 1.00 95.60 O
ATOM 27 O5' C B 46 92.986 -64.744-163.779 1.00 92.53 O
TER

Atoms:
OP1: (98.294,-53.889,-171.804)
OP2: (96.020,-54.719,-172.592)
C3': (96.206,-59.553,-172.418)
C1': (94.234,-58.863,-171.332)
C5': (97.318,-57.253,-172.122)
O4': (95.217,-57.874,-171.107)
C8: (93.062,-57.050,-172.708)
O2': (95.290,-60.891,-170.625)
C6: (90.773,-58.721,-174.805)
C5: (91.730,-58.197,-173.909)
C4: (92.414,-59.114,-173.128)
P: (97.085,-54.707,-171.563)
C4': (96.521,-58.373,-171.508)
C2': (94.955,-60.134,-171.782)
C2: (91.320,-60.827,-174.032)
N1: (90.587,-60.062,-174.845)
N3: (92.246,-60.458,-173.147)
N6: (90.036,-57.962,-175.616)
N7: (92.148,-56.896,-173.633)
N9: (93.283,-58.364,-172.353)
O5': (97.504,-56.195,-171.198)
O3': (97.267,-60.481,-172.508)
OP1: (87.821,-69.308,-165.525)
OP2: (87.857,-67.702,-167.523)
C3': (92.240,-67.091,-165.305)
C1': (93.725,-67.098,-167.137)
C5': (91.057,-69.202,-166.122)
O4': (93.128,-68.374,-167.071)
C8: (91.921,-66.651,-168.886)
O2': (94.605,-66.713,-164.957)
C6: (92.954,-63.791,-170.639)
C5: (92.679,-64.918,-169.852)
C4: (93.595,-65.240,-168.860)
P: (88.533,-68.749,-166.716)
C4': (92.365,-68.508,-165.840)
C2': (93.508,-66.408,-165.799)
C2: (94.878,-63.545,-169.379)
N1: (94.086,-63.114,-170.375)
N3: (94.729,-64.587,-168.558)
N6: (92.168,-63.355,-171.617)
N7: (91.625,-65.816,-169.856)
N9: (93.100,-66.357,-168.243)
O5': (89.997,-68.261,-166.308)
O3': (92.078,-67.045,-163.903)
Image (generated by PyMOL):
PyMOL image
show in jmol