Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:B38:B45
Extra
PDB:
ATOM 1 O3' C A 37 -162.558 -37.689 44.034 1.00 16.86 O
ATOM 2 P A A 38 -161.906 -36.312 43.525 1.00 16.98 P
ATOM 3 OP1 A A 38 -160.436 -36.445 43.649 1.00 16.98 O
ATOM 4 OP2 A A 38 -162.589 -35.204 44.248 1.00 16.98 O
ATOM 5 O5' A A 38 -162.319 -36.300 41.991 1.00 16.98 O
ATOM 6 C5' A A 38 -161.823 -37.300 41.128 1.00 16.98 C
ATOM 7 C4' A A 38 -162.160 -37.020 39.695 1.00 16.98 C
ATOM 8 O4' A A 38 -163.594 -36.974 39.530 1.00 16.98 O
ATOM 9 C3' A A 38 -161.694 -35.693 39.140 1.00 16.98 C
ATOM 10 O3' A A 38 -160.324 -35.696 38.792 1.00 16.98 O
ATOM 11 C2' A A 38 -162.606 -35.526 37.951 1.00 16.98 C
ATOM 12 O2' A A 38 -162.178 -36.368 36.901 1.00 16.98 O
ATOM 13 C1' A A 38 -163.915 -36.076 38.503 1.00 16.98 C
ATOM 14 N9 A A 38 -164.767 -35.030 39.071 1.00 17.25 N
ATOM 15 C8 A A 38 -164.744 -34.530 40.337 1.00 17.25 C
ATOM 16 N7 A A 38 -165.656 -33.622 40.562 1.00 17.25 N
ATOM 17 C5 A A 38 -166.326 -33.557 39.366 1.00 17.25 C
ATOM 18 C6 A A 38 -167.412 -32.786 38.967 1.00 17.25 C
ATOM 19 N6 A A 38 -168.033 -31.904 39.766 1.00 17.25 N
ATOM 20 N1 A A 38 -167.829 -32.953 37.698 1.00 17.25 N
ATOM 21 C2 A A 38 -167.200 -33.837 36.913 1.00 17.25 C
ATOM 22 N3 A A 38 -166.176 -34.625 37.185 1.00 17.25 N
ATOM 23 C4 A A 38 -165.793 -34.418 38.442 1.00 17.25 C
ATOM 24 P U A 39 -159.617 -34.352 38.233 1.00 12.31 P
ATOM 25 OP1 U A 39 -158.152 -34.626 38.199 1.00 12.31 O
ATOM 26 OP2 U A 39 -160.119 -33.191 39.056 1.00 12.31 O
ATOM 27 O5' U A 39 -160.183 -34.246 36.744 1.00 12.31 O
TER
ATOM 1 O3' A B 44 -168.356 -39.776 27.414 1.00 11.76 O
ATOM 2 P A B 45 -168.873 -40.776 28.532 1.00 0.11 P
ATOM 3 OP1 A B 45 -169.375 -41.974 27.808 1.00 0.11 O
ATOM 4 OP2 A B 45 -169.800 -40.028 29.432 1.00 0.11 O
ATOM 5 O5' A B 45 -167.538 -41.122 29.309 1.00 0.11 O
ATOM 6 C5' A B 45 -166.503 -41.847 28.670 1.00 0.11 C
ATOM 7 C4' A B 45 -165.207 -41.657 29.380 1.00 0.11 C
ATOM 8 O4' A B 45 -164.865 -40.249 29.408 1.00 0.11 O
ATOM 9 C3' A B 45 -165.222 -42.061 30.830 1.00 0.11 C
ATOM 10 O3' A B 45 -165.082 -43.453 31.007 1.00 0.11 O
ATOM 11 C2' A B 45 -164.087 -41.246 31.419 1.00 0.11 C
ATOM 12 O2' A B 45 -162.842 -41.897 31.223 1.00 0.11 O
ATOM 13 C1' A B 45 -164.129 -39.973 30.564 1.00 0.11 C
ATOM 14 N9 A B 45 -164.773 -38.871 31.264 1.00 0.34 N
ATOM 15 C8 A B 45 -165.840 -38.146 30.882 1.00 0.34 C
ATOM 16 N7 A B 45 -166.168 -37.211 31.752 1.00 0.34 N
ATOM 17 C5 A B 45 -165.260 -37.334 32.773 1.00 0.34 C
ATOM 18 C6 A B 45 -165.072 -36.639 33.987 1.00 0.34 C
ATOM 19 N6 A B 45 -165.798 -35.626 34.469 1.00 0.34 N
ATOM 20 N1 A B 45 -164.056 -37.048 34.752 1.00 0.34 N
ATOM 21 C2 A B 45 -163.301 -38.067 34.318 1.00 0.34 C
ATOM 22 N3 A B 45 -163.388 -38.782 33.200 1.00 0.34 N
ATOM 23 C4 A B 45 -164.403 -38.361 32.464 1.00 0.34 C
ATOM 24 P C B 46 -166.004 -44.217 32.065 1.00 0.17 P
ATOM 25 OP1 C B 46 -165.672 -45.658 31.973 1.00 0.17 O
ATOM 26 OP2 C B 46 -167.410 -43.784 31.815 1.00 0.17 O
ATOM 27 O5' C B 46 -165.501 -43.629 33.459 1.00 0.17 O
TER
ATOM 2 P A A 38 -161.906 -36.312 43.525 1.00 16.98 P
ATOM 3 OP1 A A 38 -160.436 -36.445 43.649 1.00 16.98 O
ATOM 4 OP2 A A 38 -162.589 -35.204 44.248 1.00 16.98 O
ATOM 5 O5' A A 38 -162.319 -36.300 41.991 1.00 16.98 O
ATOM 6 C5' A A 38 -161.823 -37.300 41.128 1.00 16.98 C
ATOM 7 C4' A A 38 -162.160 -37.020 39.695 1.00 16.98 C
ATOM 8 O4' A A 38 -163.594 -36.974 39.530 1.00 16.98 O
ATOM 9 C3' A A 38 -161.694 -35.693 39.140 1.00 16.98 C
ATOM 10 O3' A A 38 -160.324 -35.696 38.792 1.00 16.98 O
ATOM 11 C2' A A 38 -162.606 -35.526 37.951 1.00 16.98 C
ATOM 12 O2' A A 38 -162.178 -36.368 36.901 1.00 16.98 O
ATOM 13 C1' A A 38 -163.915 -36.076 38.503 1.00 16.98 C
ATOM 14 N9 A A 38 -164.767 -35.030 39.071 1.00 17.25 N
ATOM 15 C8 A A 38 -164.744 -34.530 40.337 1.00 17.25 C
ATOM 16 N7 A A 38 -165.656 -33.622 40.562 1.00 17.25 N
ATOM 17 C5 A A 38 -166.326 -33.557 39.366 1.00 17.25 C
ATOM 18 C6 A A 38 -167.412 -32.786 38.967 1.00 17.25 C
ATOM 19 N6 A A 38 -168.033 -31.904 39.766 1.00 17.25 N
ATOM 20 N1 A A 38 -167.829 -32.953 37.698 1.00 17.25 N
ATOM 21 C2 A A 38 -167.200 -33.837 36.913 1.00 17.25 C
ATOM 22 N3 A A 38 -166.176 -34.625 37.185 1.00 17.25 N
ATOM 23 C4 A A 38 -165.793 -34.418 38.442 1.00 17.25 C
ATOM 24 P U A 39 -159.617 -34.352 38.233 1.00 12.31 P
ATOM 25 OP1 U A 39 -158.152 -34.626 38.199 1.00 12.31 O
ATOM 26 OP2 U A 39 -160.119 -33.191 39.056 1.00 12.31 O
ATOM 27 O5' U A 39 -160.183 -34.246 36.744 1.00 12.31 O
TER
ATOM 1 O3' A B 44 -168.356 -39.776 27.414 1.00 11.76 O
ATOM 2 P A B 45 -168.873 -40.776 28.532 1.00 0.11 P
ATOM 3 OP1 A B 45 -169.375 -41.974 27.808 1.00 0.11 O
ATOM 4 OP2 A B 45 -169.800 -40.028 29.432 1.00 0.11 O
ATOM 5 O5' A B 45 -167.538 -41.122 29.309 1.00 0.11 O
ATOM 6 C5' A B 45 -166.503 -41.847 28.670 1.00 0.11 C
ATOM 7 C4' A B 45 -165.207 -41.657 29.380 1.00 0.11 C
ATOM 8 O4' A B 45 -164.865 -40.249 29.408 1.00 0.11 O
ATOM 9 C3' A B 45 -165.222 -42.061 30.830 1.00 0.11 C
ATOM 10 O3' A B 45 -165.082 -43.453 31.007 1.00 0.11 O
ATOM 11 C2' A B 45 -164.087 -41.246 31.419 1.00 0.11 C
ATOM 12 O2' A B 45 -162.842 -41.897 31.223 1.00 0.11 O
ATOM 13 C1' A B 45 -164.129 -39.973 30.564 1.00 0.11 C
ATOM 14 N9 A B 45 -164.773 -38.871 31.264 1.00 0.34 N
ATOM 15 C8 A B 45 -165.840 -38.146 30.882 1.00 0.34 C
ATOM 16 N7 A B 45 -166.168 -37.211 31.752 1.00 0.34 N
ATOM 17 C5 A B 45 -165.260 -37.334 32.773 1.00 0.34 C
ATOM 18 C6 A B 45 -165.072 -36.639 33.987 1.00 0.34 C
ATOM 19 N6 A B 45 -165.798 -35.626 34.469 1.00 0.34 N
ATOM 20 N1 A B 45 -164.056 -37.048 34.752 1.00 0.34 N
ATOM 21 C2 A B 45 -163.301 -38.067 34.318 1.00 0.34 C
ATOM 22 N3 A B 45 -163.388 -38.782 33.200 1.00 0.34 N
ATOM 23 C4 A B 45 -164.403 -38.361 32.464 1.00 0.34 C
ATOM 24 P C B 46 -166.004 -44.217 32.065 1.00 0.17 P
ATOM 25 OP1 C B 46 -165.672 -45.658 31.973 1.00 0.17 O
ATOM 26 OP2 C B 46 -167.410 -43.784 31.815 1.00 0.17 O
ATOM 27 O5' C B 46 -165.501 -43.629 33.459 1.00 0.17 O
TER
Atoms:
OP1: (-160.436,-36.445,43.649)
OP2: (-162.589,-35.204,44.248)
C3': (-161.694,-35.693,39.140)
C1': (-163.915,-36.076,38.503)
C5': (-161.823,-37.300,41.128)
O4': (-163.594,-36.974,39.530)
C8: (-164.744,-34.530,40.337)
O2': (-162.178,-36.368,36.901)
C6: (-167.412,-32.786,38.967)
C5: (-166.326,-33.557,39.366)
C4: (-165.793,-34.418,38.442)
P: (-161.906,-36.312,43.525)
C4': (-162.160,-37.020,39.695)
C2': (-162.606,-35.526,37.951)
C2: (-167.200,-33.837,36.913)
N1: (-167.829,-32.953,37.698)
N3: (-166.176,-34.625,37.185)
N6: (-168.033,-31.904,39.766)
N7: (-165.656,-33.622,40.562)
N9: (-164.767,-35.030,39.071)
O5': (-162.319,-36.300,41.991)
O3': (-160.324,-35.696,38.792)
OP2: (-162.589,-35.204,44.248)
C3': (-161.694,-35.693,39.140)
C1': (-163.915,-36.076,38.503)
C5': (-161.823,-37.300,41.128)
O4': (-163.594,-36.974,39.530)
C8: (-164.744,-34.530,40.337)
O2': (-162.178,-36.368,36.901)
C6: (-167.412,-32.786,38.967)
C5: (-166.326,-33.557,39.366)
C4: (-165.793,-34.418,38.442)
P: (-161.906,-36.312,43.525)
C4': (-162.160,-37.020,39.695)
C2': (-162.606,-35.526,37.951)
C2: (-167.200,-33.837,36.913)
N1: (-167.829,-32.953,37.698)
N3: (-166.176,-34.625,37.185)
N6: (-168.033,-31.904,39.766)
N7: (-165.656,-33.622,40.562)
N9: (-164.767,-35.030,39.071)
O5': (-162.319,-36.300,41.991)
O3': (-160.324,-35.696,38.792)
OP1: (-169.375,-41.974,27.808)
OP2: (-169.800,-40.028,29.432)
C3': (-165.222,-42.061,30.830)
C1': (-164.129,-39.973,30.564)
C5': (-166.503,-41.847,28.670)
O4': (-164.865,-40.249,29.408)
C8: (-165.840,-38.146,30.882)
O2': (-162.842,-41.897,31.223)
C6: (-165.072,-36.639,33.987)
C5: (-165.260,-37.334,32.773)
C4: (-164.403,-38.361,32.464)
P: (-168.873,-40.776,28.532)
C4': (-165.207,-41.657,29.380)
C2': (-164.087,-41.246,31.419)
C2: (-163.301,-38.067,34.318)
N1: (-164.056,-37.048,34.752)
N3: (-163.388,-38.782,33.200)
N6: (-165.798,-35.626,34.469)
N7: (-166.168,-37.211,31.752)
N9: (-164.773,-38.871,31.264)
O5': (-167.538,-41.122,29.309)
O3': (-165.082,-43.453,31.007)
OP2: (-169.800,-40.028,29.432)
C3': (-165.222,-42.061,30.830)
C1': (-164.129,-39.973,30.564)
C5': (-166.503,-41.847,28.670)
O4': (-164.865,-40.249,29.408)
C8: (-165.840,-38.146,30.882)
O2': (-162.842,-41.897,31.223)
C6: (-165.072,-36.639,33.987)
C5: (-165.260,-37.334,32.773)
C4: (-164.403,-38.361,32.464)
P: (-168.873,-40.776,28.532)
C4': (-165.207,-41.657,29.380)
C2': (-164.087,-41.246,31.419)
C2: (-163.301,-38.067,34.318)
N1: (-164.056,-37.048,34.752)
N3: (-163.388,-38.782,33.200)
N6: (-165.798,-35.626,34.469)
N7: (-166.168,-37.211,31.752)
N9: (-164.773,-38.871,31.264)
O5': (-167.538,-41.122,29.309)
O3': (-165.082,-43.453,31.007)
Image (generated by PyMOL):