Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11954:1840
Extra
PDB:
ATOM 1 O3' C A1953 5.369 3.899 96.181 1.00 33.59 O
ATOM 2 P A A1954 3.960 3.706 96.834 1.00 40.66 P
ATOM 3 OP1 A A1954 3.983 2.468 97.666 1.00 40.68 O
ATOM 4 OP2 A A1954 2.998 3.809 95.743 1.00 40.64 O
ATOM 5 O5' A A1954 3.885 4.972 97.758 1.00 40.97 O
ATOM 6 C5' A A1954 4.498 4.940 99.022 1.00 41.10 C
ATOM 7 C4' A A1954 4.438 6.268 99.677 1.00 41.39 C
ATOM 8 O4' A A1954 4.640 7.269 98.691 1.00 41.29 O
ATOM 9 C3' A A1954 3.117 6.639 100.293 1.00 41.76 C
ATOM 10 O3' A A1954 2.962 6.103 101.572 1.00 41.98 O
ATOM 11 C2' A A1954 3.192 8.128 100.316 1.00 41.95 C
ATOM 12 O2' A A1954 4.053 8.535 101.381 1.00 42.08 O
ATOM 13 C1' A A1954 3.921 8.401 99.031 1.00 41.62 C
ATOM 14 N9 A A1954 3.061 8.758 97.913 1.00 41.59 N
ATOM 15 C8 A A1954 3.125 8.161 96.706 1.00 41.29 C
ATOM 16 N7 A A1954 2.412 8.722 95.797 1.00 41.33 N
ATOM 17 C5 A A1954 1.892 9.783 96.454 1.00 41.67 C
ATOM 18 C6 A A1954 1.045 10.753 95.996 1.00 41.88 C
ATOM 19 N6 A A1954 0.647 10.718 94.735 1.00 41.74 N
ATOM 20 N1 A A1954 0.623 11.710 96.842 1.00 42.24 N
ATOM 21 C2 A A1954 1.110 11.634 98.081 1.00 42.37 C
ATOM 22 N3 A A1954 1.933 10.742 98.635 1.00 42.19 N
ATOM 23 C4 A A1954 2.281 9.836 97.743 1.00 41.84 C
ATOM 24 P U A1955 1.654 5.307 101.922 1.00 43.82 P
ATOM 25 OP1 U A1955 2.037 4.198 102.787 1.00 43.81 O
ATOM 26 OP2 U A1955 0.989 5.043 100.670 1.00 43.65 O
ATOM 27 O5' U A1955 0.782 6.342 102.735 1.00 44.26 O
TER
ATOM 1 O3' A B 839 2.367 19.937 107.993 1.00 61.17 O
ATOM 2 P A B 840 2.294 18.583 108.879 1.00 43.53 P
ATOM 3 OP1 A B 840 0.885 18.171 108.912 1.00 43.69 O
ATOM 4 OP2 A B 840 2.998 18.827 110.159 1.00 43.80 O
ATOM 5 O5' A B 840 3.128 17.556 108.009 1.00 42.97 O
ATOM 6 C5' A B 840 3.707 16.416 108.621 1.00 42.82 C
ATOM 7 C4' A B 840 4.780 15.810 107.770 1.00 42.33 C
ATOM 8 O4' A B 840 4.181 14.854 106.868 1.00 42.03 O
ATOM 9 C3' A B 840 5.579 16.801 106.914 1.00 42.18 C
ATOM 10 O3' A B 840 6.990 16.696 107.207 1.00 42.03 O
ATOM 11 C2' A B 840 5.325 16.351 105.466 1.00 41.79 C
ATOM 12 O2' A B 840 6.504 16.387 104.633 1.00 41.43 O
ATOM 13 C1' A B 840 4.830 14.915 105.637 1.00 41.65 C
ATOM 14 N9 A B 840 3.936 14.446 104.564 1.00 41.46 N
ATOM 15 C8 A B 840 3.025 15.135 103.824 1.00 41.56 C
ATOM 16 N7 A B 840 2.460 14.441 102.859 1.00 41.32 N
ATOM 17 C5 A B 840 3.065 13.194 102.941 1.00 41.03 C
ATOM 18 C6 A B 840 2.933 11.997 102.217 1.00 40.70 C
ATOM 19 N6 A B 840 2.099 11.810 101.208 1.00 40.60 N
ATOM 20 N1 A B 840 3.699 10.960 102.538 1.00 40.49 N
ATOM 21 C2 A B 840 4.528 11.086 103.537 1.00 40.59 C
ATOM 22 N3 A B 840 4.764 12.138 104.295 1.00 40.89 N
ATOM 23 C4 A B 840 3.986 13.191 103.958 1.00 41.10 C
ATOM 24 P U B 841 7.705 17.751 108.195 1.00 42.13 P
ATOM 25 OP1 U B 841 8.676 16.984 108.997 1.00 42.06 O
ATOM 26 OP2 U B 841 6.639 18.500 108.912 1.00 42.61 O
ATOM 27 O5' U B 841 8.480 18.736 107.198 1.00 41.97 O
TER
ATOM 2 P A A1954 3.960 3.706 96.834 1.00 40.66 P
ATOM 3 OP1 A A1954 3.983 2.468 97.666 1.00 40.68 O
ATOM 4 OP2 A A1954 2.998 3.809 95.743 1.00 40.64 O
ATOM 5 O5' A A1954 3.885 4.972 97.758 1.00 40.97 O
ATOM 6 C5' A A1954 4.498 4.940 99.022 1.00 41.10 C
ATOM 7 C4' A A1954 4.438 6.268 99.677 1.00 41.39 C
ATOM 8 O4' A A1954 4.640 7.269 98.691 1.00 41.29 O
ATOM 9 C3' A A1954 3.117 6.639 100.293 1.00 41.76 C
ATOM 10 O3' A A1954 2.962 6.103 101.572 1.00 41.98 O
ATOM 11 C2' A A1954 3.192 8.128 100.316 1.00 41.95 C
ATOM 12 O2' A A1954 4.053 8.535 101.381 1.00 42.08 O
ATOM 13 C1' A A1954 3.921 8.401 99.031 1.00 41.62 C
ATOM 14 N9 A A1954 3.061 8.758 97.913 1.00 41.59 N
ATOM 15 C8 A A1954 3.125 8.161 96.706 1.00 41.29 C
ATOM 16 N7 A A1954 2.412 8.722 95.797 1.00 41.33 N
ATOM 17 C5 A A1954 1.892 9.783 96.454 1.00 41.67 C
ATOM 18 C6 A A1954 1.045 10.753 95.996 1.00 41.88 C
ATOM 19 N6 A A1954 0.647 10.718 94.735 1.00 41.74 N
ATOM 20 N1 A A1954 0.623 11.710 96.842 1.00 42.24 N
ATOM 21 C2 A A1954 1.110 11.634 98.081 1.00 42.37 C
ATOM 22 N3 A A1954 1.933 10.742 98.635 1.00 42.19 N
ATOM 23 C4 A A1954 2.281 9.836 97.743 1.00 41.84 C
ATOM 24 P U A1955 1.654 5.307 101.922 1.00 43.82 P
ATOM 25 OP1 U A1955 2.037 4.198 102.787 1.00 43.81 O
ATOM 26 OP2 U A1955 0.989 5.043 100.670 1.00 43.65 O
ATOM 27 O5' U A1955 0.782 6.342 102.735 1.00 44.26 O
TER
ATOM 1 O3' A B 839 2.367 19.937 107.993 1.00 61.17 O
ATOM 2 P A B 840 2.294 18.583 108.879 1.00 43.53 P
ATOM 3 OP1 A B 840 0.885 18.171 108.912 1.00 43.69 O
ATOM 4 OP2 A B 840 2.998 18.827 110.159 1.00 43.80 O
ATOM 5 O5' A B 840 3.128 17.556 108.009 1.00 42.97 O
ATOM 6 C5' A B 840 3.707 16.416 108.621 1.00 42.82 C
ATOM 7 C4' A B 840 4.780 15.810 107.770 1.00 42.33 C
ATOM 8 O4' A B 840 4.181 14.854 106.868 1.00 42.03 O
ATOM 9 C3' A B 840 5.579 16.801 106.914 1.00 42.18 C
ATOM 10 O3' A B 840 6.990 16.696 107.207 1.00 42.03 O
ATOM 11 C2' A B 840 5.325 16.351 105.466 1.00 41.79 C
ATOM 12 O2' A B 840 6.504 16.387 104.633 1.00 41.43 O
ATOM 13 C1' A B 840 4.830 14.915 105.637 1.00 41.65 C
ATOM 14 N9 A B 840 3.936 14.446 104.564 1.00 41.46 N
ATOM 15 C8 A B 840 3.025 15.135 103.824 1.00 41.56 C
ATOM 16 N7 A B 840 2.460 14.441 102.859 1.00 41.32 N
ATOM 17 C5 A B 840 3.065 13.194 102.941 1.00 41.03 C
ATOM 18 C6 A B 840 2.933 11.997 102.217 1.00 40.70 C
ATOM 19 N6 A B 840 2.099 11.810 101.208 1.00 40.60 N
ATOM 20 N1 A B 840 3.699 10.960 102.538 1.00 40.49 N
ATOM 21 C2 A B 840 4.528 11.086 103.537 1.00 40.59 C
ATOM 22 N3 A B 840 4.764 12.138 104.295 1.00 40.89 N
ATOM 23 C4 A B 840 3.986 13.191 103.958 1.00 41.10 C
ATOM 24 P U B 841 7.705 17.751 108.195 1.00 42.13 P
ATOM 25 OP1 U B 841 8.676 16.984 108.997 1.00 42.06 O
ATOM 26 OP2 U B 841 6.639 18.500 108.912 1.00 42.61 O
ATOM 27 O5' U B 841 8.480 18.736 107.198 1.00 41.97 O
TER
Atoms:
OP1: (3.983,2.468,97.666)
OP2: (2.998,3.809,95.743)
C3': (3.117,6.639,100.293)
C1': (3.921,8.401,99.031)
C5': (4.498,4.940,99.022)
O4': (4.640,7.269,98.691)
C8: (3.125,8.161,96.706)
O2': (4.053,8.535,101.381)
C6: (1.045,10.753,95.996)
C5: (1.892,9.783,96.454)
C4: (2.281,9.836,97.743)
P: (3.960,3.706,96.834)
C4': (4.438,6.268,99.677)
C2': (3.192,8.128,100.316)
C2: (1.110,11.634,98.081)
N1: (0.623,11.710,96.842)
N3: (1.933,10.742,98.635)
N6: (0.647,10.718,94.735)
N7: (2.412,8.722,95.797)
N9: (3.061,8.758,97.913)
O5': (3.885,4.972,97.758)
O3': (2.962,6.103,101.572)
OP2: (2.998,3.809,95.743)
C3': (3.117,6.639,100.293)
C1': (3.921,8.401,99.031)
C5': (4.498,4.940,99.022)
O4': (4.640,7.269,98.691)
C8: (3.125,8.161,96.706)
O2': (4.053,8.535,101.381)
C6: (1.045,10.753,95.996)
C5: (1.892,9.783,96.454)
C4: (2.281,9.836,97.743)
P: (3.960,3.706,96.834)
C4': (4.438,6.268,99.677)
C2': (3.192,8.128,100.316)
C2: (1.110,11.634,98.081)
N1: (0.623,11.710,96.842)
N3: (1.933,10.742,98.635)
N6: (0.647,10.718,94.735)
N7: (2.412,8.722,95.797)
N9: (3.061,8.758,97.913)
O5': (3.885,4.972,97.758)
O3': (2.962,6.103,101.572)
OP1: (0.885,18.171,108.912)
OP2: (2.998,18.827,110.159)
C3': (5.579,16.801,106.914)
C1': (4.830,14.915,105.637)
C5': (3.707,16.416,108.621)
O4': (4.181,14.854,106.868)
C8: (3.025,15.135,103.824)
O2': (6.504,16.387,104.633)
C6: (2.933,11.997,102.217)
C5: (3.065,13.194,102.941)
C4: (3.986,13.191,103.958)
P: (2.294,18.583,108.879)
C4': (4.780,15.810,107.770)
C2': (5.325,16.351,105.466)
C2: (4.528,11.086,103.537)
N1: (3.699,10.960,102.538)
N3: (4.764,12.138,104.295)
N6: (2.099,11.810,101.208)
N7: (2.460,14.441,102.859)
N9: (3.936,14.446,104.564)
O5': (3.128,17.556,108.009)
O3': (6.990,16.696,107.207)
OP2: (2.998,18.827,110.159)
C3': (5.579,16.801,106.914)
C1': (4.830,14.915,105.637)
C5': (3.707,16.416,108.621)
O4': (4.181,14.854,106.868)
C8: (3.025,15.135,103.824)
O2': (6.504,16.387,104.633)
C6: (2.933,11.997,102.217)
C5: (3.065,13.194,102.941)
C4: (3.986,13.191,103.958)
P: (2.294,18.583,108.879)
C4': (4.780,15.810,107.770)
C2': (5.325,16.351,105.466)
C2: (4.528,11.086,103.537)
N1: (3.699,10.960,102.538)
N3: (4.764,12.138,104.295)
N6: (2.099,11.810,101.208)
N7: (2.460,14.441,102.859)
N9: (3.936,14.446,104.564)
O5': (3.128,17.556,108.009)
O3': (6.990,16.696,107.207)
Image (generated by PyMOL):