Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:326:355
Extra
PDB:
ATOM 1 O3' C A 25 17.598 -90.488 21.690 1.00 76.14 O
ATOM 2 P A A 26 16.522 -91.367 22.464 1.00 74.39 P
ATOM 3 OP1 A A 26 16.655 -91.075 23.923 1.00 73.31 O
ATOM 4 OP2 A A 26 16.676 -92.752 21.992 1.00 75.38 O
ATOM 5 O5' A A 26 15.176 -90.750 21.910 1.00 74.71 O
ATOM 6 C5' A A 26 15.068 -89.348 21.772 1.00 74.09 C
ATOM 7 C4' A A 26 14.117 -88.962 20.682 1.00 74.77 C
ATOM 8 O4' A A 26 14.549 -89.479 19.394 1.00 75.75 O
ATOM 9 C3' A A 26 12.715 -89.478 20.826 1.00 75.27 C
ATOM 10 O3' A A 26 11.993 -88.763 21.809 1.00 74.46 O
ATOM 11 C2' A A 26 12.191 -89.293 19.410 1.00 76.17 C
ATOM 12 O2' A A 26 11.953 -87.920 19.147 1.00 75.68 O
ATOM 13 C1' A A 26 13.410 -89.734 18.594 1.00 76.63 C
ATOM 14 N9 A A 26 13.371 -91.181 18.298 1.00 77.59 N
ATOM 15 C8 A A 26 14.157 -92.141 18.900 1.00 77.55 C
ATOM 16 N7 A A 26 13.933 -93.380 18.500 1.00 78.52 N
ATOM 17 C5 A A 26 12.926 -93.224 17.576 1.00 79.25 C
ATOM 18 C6 A A 26 12.270 -94.163 16.812 1.00 80.40 C
ATOM 19 N6 A A 26 12.568 -95.445 16.884 1.00 81.00 N
ATOM 20 N1 A A 26 11.307 -93.734 15.987 1.00 80.91 N
ATOM 21 C2 A A 26 11.033 -92.433 15.930 1.00 80.30 C
ATOM 22 N3 A A 26 11.601 -91.445 16.595 1.00 79.21 N
ATOM 23 C4 A A 26 12.559 -91.897 17.426 1.00 78.71 C
ATOM 24 P C A 27 11.145 -89.526 22.948 1.00 61.95 P
ATOM 25 OP1 C A 27 11.180 -88.670 24.169 1.00 60.77 O
ATOM 26 OP2 C A 27 11.649 -90.906 23.049 1.00 62.48 O
ATOM 27 O5' C A 27 9.697 -89.503 22.317 1.00 62.66 O
TER
ATOM 1 O3' A B 54 6.053 -84.322 9.364 1.00 83.50 O
ATOM 2 P A B 55 7.460 -83.575 9.566 1.00 81.67 P
ATOM 3 OP1 A B 55 7.301 -82.228 8.949 1.00 81.45 O
ATOM 4 OP2 A B 55 8.528 -84.485 9.043 1.00 82.24 O
ATOM 5 O5' A B 55 7.583 -83.438 11.164 1.00 80.54 O
ATOM 6 C5' A B 55 7.182 -82.242 11.826 1.00 79.61 C
ATOM 7 C4' A B 55 7.089 -82.397 13.340 1.00 78.74 C
ATOM 8 O4' A B 55 6.648 -83.724 13.702 1.00 79.26 O
ATOM 9 C3' A B 55 8.374 -82.226 14.128 1.00 77.86 C
ATOM 10 O3' A B 55 8.754 -80.887 14.278 1.00 77.04 O
ATOM 11 C2' A B 55 8.038 -82.918 15.436 1.00 77.45 C
ATOM 12 O2' A B 55 7.163 -82.128 16.230 1.00 76.78 O
ATOM 13 C1' A B 55 7.266 -84.116 14.912 1.00 78.55 C
ATOM 14 N9 A B 55 8.166 -85.227 14.614 1.00 79.08 N
ATOM 15 C8 A B 55 8.570 -85.676 13.384 1.00 80.00 C
ATOM 16 N7 A B 55 9.376 -86.703 13.452 1.00 80.30 N
ATOM 17 C5 A B 55 9.526 -86.916 14.820 1.00 79.49 C
ATOM 18 C6 A B 55 10.268 -87.853 15.561 1.00 79.33 C
ATOM 19 N6 A B 55 11.031 -88.785 14.990 1.00 80.01 N
ATOM 20 N1 A B 55 10.186 -87.800 16.911 1.00 78.47 N
ATOM 21 C2 A B 55 9.413 -86.857 17.472 1.00 77.82 C
ATOM 22 N3 A B 55 8.672 -85.913 16.886 1.00 77.88 N
ATOM 23 C4 A B 55 8.782 -86.004 15.547 1.00 78.74 C
ATOM 24 P G B 56 10.148 -80.401 13.685 1.00 82.10 P
ATOM 25 OP1 G B 56 10.083 -78.928 13.547 1.00 81.52 O
ATOM 26 OP2 G B 56 10.409 -81.219 12.481 1.00 83.21 O
ATOM 27 O5' G B 56 11.160 -80.787 14.847 1.00 81.33 O
TER
ATOM 2 P A A 26 16.522 -91.367 22.464 1.00 74.39 P
ATOM 3 OP1 A A 26 16.655 -91.075 23.923 1.00 73.31 O
ATOM 4 OP2 A A 26 16.676 -92.752 21.992 1.00 75.38 O
ATOM 5 O5' A A 26 15.176 -90.750 21.910 1.00 74.71 O
ATOM 6 C5' A A 26 15.068 -89.348 21.772 1.00 74.09 C
ATOM 7 C4' A A 26 14.117 -88.962 20.682 1.00 74.77 C
ATOM 8 O4' A A 26 14.549 -89.479 19.394 1.00 75.75 O
ATOM 9 C3' A A 26 12.715 -89.478 20.826 1.00 75.27 C
ATOM 10 O3' A A 26 11.993 -88.763 21.809 1.00 74.46 O
ATOM 11 C2' A A 26 12.191 -89.293 19.410 1.00 76.17 C
ATOM 12 O2' A A 26 11.953 -87.920 19.147 1.00 75.68 O
ATOM 13 C1' A A 26 13.410 -89.734 18.594 1.00 76.63 C
ATOM 14 N9 A A 26 13.371 -91.181 18.298 1.00 77.59 N
ATOM 15 C8 A A 26 14.157 -92.141 18.900 1.00 77.55 C
ATOM 16 N7 A A 26 13.933 -93.380 18.500 1.00 78.52 N
ATOM 17 C5 A A 26 12.926 -93.224 17.576 1.00 79.25 C
ATOM 18 C6 A A 26 12.270 -94.163 16.812 1.00 80.40 C
ATOM 19 N6 A A 26 12.568 -95.445 16.884 1.00 81.00 N
ATOM 20 N1 A A 26 11.307 -93.734 15.987 1.00 80.91 N
ATOM 21 C2 A A 26 11.033 -92.433 15.930 1.00 80.30 C
ATOM 22 N3 A A 26 11.601 -91.445 16.595 1.00 79.21 N
ATOM 23 C4 A A 26 12.559 -91.897 17.426 1.00 78.71 C
ATOM 24 P C A 27 11.145 -89.526 22.948 1.00 61.95 P
ATOM 25 OP1 C A 27 11.180 -88.670 24.169 1.00 60.77 O
ATOM 26 OP2 C A 27 11.649 -90.906 23.049 1.00 62.48 O
ATOM 27 O5' C A 27 9.697 -89.503 22.317 1.00 62.66 O
TER
ATOM 1 O3' A B 54 6.053 -84.322 9.364 1.00 83.50 O
ATOM 2 P A B 55 7.460 -83.575 9.566 1.00 81.67 P
ATOM 3 OP1 A B 55 7.301 -82.228 8.949 1.00 81.45 O
ATOM 4 OP2 A B 55 8.528 -84.485 9.043 1.00 82.24 O
ATOM 5 O5' A B 55 7.583 -83.438 11.164 1.00 80.54 O
ATOM 6 C5' A B 55 7.182 -82.242 11.826 1.00 79.61 C
ATOM 7 C4' A B 55 7.089 -82.397 13.340 1.00 78.74 C
ATOM 8 O4' A B 55 6.648 -83.724 13.702 1.00 79.26 O
ATOM 9 C3' A B 55 8.374 -82.226 14.128 1.00 77.86 C
ATOM 10 O3' A B 55 8.754 -80.887 14.278 1.00 77.04 O
ATOM 11 C2' A B 55 8.038 -82.918 15.436 1.00 77.45 C
ATOM 12 O2' A B 55 7.163 -82.128 16.230 1.00 76.78 O
ATOM 13 C1' A B 55 7.266 -84.116 14.912 1.00 78.55 C
ATOM 14 N9 A B 55 8.166 -85.227 14.614 1.00 79.08 N
ATOM 15 C8 A B 55 8.570 -85.676 13.384 1.00 80.00 C
ATOM 16 N7 A B 55 9.376 -86.703 13.452 1.00 80.30 N
ATOM 17 C5 A B 55 9.526 -86.916 14.820 1.00 79.49 C
ATOM 18 C6 A B 55 10.268 -87.853 15.561 1.00 79.33 C
ATOM 19 N6 A B 55 11.031 -88.785 14.990 1.00 80.01 N
ATOM 20 N1 A B 55 10.186 -87.800 16.911 1.00 78.47 N
ATOM 21 C2 A B 55 9.413 -86.857 17.472 1.00 77.82 C
ATOM 22 N3 A B 55 8.672 -85.913 16.886 1.00 77.88 N
ATOM 23 C4 A B 55 8.782 -86.004 15.547 1.00 78.74 C
ATOM 24 P G B 56 10.148 -80.401 13.685 1.00 82.10 P
ATOM 25 OP1 G B 56 10.083 -78.928 13.547 1.00 81.52 O
ATOM 26 OP2 G B 56 10.409 -81.219 12.481 1.00 83.21 O
ATOM 27 O5' G B 56 11.160 -80.787 14.847 1.00 81.33 O
TER
Atoms:
OP1: (16.655,-91.075,23.923)
OP2: (16.676,-92.752,21.992)
C3': (12.715,-89.478,20.826)
C1': (13.410,-89.734,18.594)
C5': (15.068,-89.348,21.772)
O4': (14.549,-89.479,19.394)
C8: (14.157,-92.141,18.900)
O2': (11.953,-87.920,19.147)
C6: (12.270,-94.163,16.812)
C5: (12.926,-93.224,17.576)
C4: (12.559,-91.897,17.426)
P: (16.522,-91.367,22.464)
C4': (14.117,-88.962,20.682)
C2': (12.191,-89.293,19.410)
C2: (11.033,-92.433,15.930)
N1: (11.307,-93.734,15.987)
N3: (11.601,-91.445,16.595)
N6: (12.568,-95.445,16.884)
N7: (13.933,-93.380,18.500)
N9: (13.371,-91.181,18.298)
O5': (15.176,-90.750,21.910)
O3': (11.993,-88.763,21.809)
OP2: (16.676,-92.752,21.992)
C3': (12.715,-89.478,20.826)
C1': (13.410,-89.734,18.594)
C5': (15.068,-89.348,21.772)
O4': (14.549,-89.479,19.394)
C8: (14.157,-92.141,18.900)
O2': (11.953,-87.920,19.147)
C6: (12.270,-94.163,16.812)
C5: (12.926,-93.224,17.576)
C4: (12.559,-91.897,17.426)
P: (16.522,-91.367,22.464)
C4': (14.117,-88.962,20.682)
C2': (12.191,-89.293,19.410)
C2: (11.033,-92.433,15.930)
N1: (11.307,-93.734,15.987)
N3: (11.601,-91.445,16.595)
N6: (12.568,-95.445,16.884)
N7: (13.933,-93.380,18.500)
N9: (13.371,-91.181,18.298)
O5': (15.176,-90.750,21.910)
O3': (11.993,-88.763,21.809)
OP1: (7.301,-82.228,8.949)
OP2: (8.528,-84.485,9.043)
C3': (8.374,-82.226,14.128)
C1': (7.266,-84.116,14.912)
C5': (7.182,-82.242,11.826)
O4': (6.648,-83.724,13.702)
C8: (8.570,-85.676,13.384)
O2': (7.163,-82.128,16.230)
C6: (10.268,-87.853,15.561)
C5: (9.526,-86.916,14.820)
C4: (8.782,-86.004,15.547)
P: (7.460,-83.575,9.566)
C4': (7.089,-82.397,13.340)
C2': (8.038,-82.918,15.436)
C2: (9.413,-86.857,17.472)
N1: (10.186,-87.800,16.911)
N3: (8.672,-85.913,16.886)
N6: (11.031,-88.785,14.990)
N7: (9.376,-86.703,13.452)
N9: (8.166,-85.227,14.614)
O5': (7.583,-83.438,11.164)
O3': (8.754,-80.887,14.278)
OP2: (8.528,-84.485,9.043)
C3': (8.374,-82.226,14.128)
C1': (7.266,-84.116,14.912)
C5': (7.182,-82.242,11.826)
O4': (6.648,-83.724,13.702)
C8: (8.570,-85.676,13.384)
O2': (7.163,-82.128,16.230)
C6: (10.268,-87.853,15.561)
C5: (9.526,-86.916,14.820)
C4: (8.782,-86.004,15.547)
P: (7.460,-83.575,9.566)
C4': (7.089,-82.397,13.340)
C2': (8.038,-82.918,15.436)
C2: (9.413,-86.857,17.472)
N1: (10.186,-87.800,16.911)
N3: (8.672,-85.913,16.886)
N6: (11.031,-88.785,14.990)
N7: (9.376,-86.703,13.452)
N9: (8.166,-85.227,14.614)
O5': (7.583,-83.438,11.164)
O3': (8.754,-80.887,14.278)
Image (generated by PyMOL):