ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:5310:567

Extra

PDB:
ATOM 1 O3' C A 309 137.974 -73.725 188.399 1.00 66.78 O
ATOM 2 P A A 310 137.590 -72.973 187.044 1.00 64.99 P
ATOM 3 OP1 A A 310 136.455 -73.725 186.439 1.00 65.61 O
ATOM 4 OP2 A A 310 138.846 -72.797 186.266 1.00 65.16 O
ATOM 5 O5' A A 310 137.092 -71.558 187.542 1.00 64.21 O
ATOM 6 C5' A A 310 135.973 -71.421 188.397 1.00 63.88 C
ATOM 7 C4' A A 310 135.765 -69.979 188.759 1.00 63.15 C
ATOM 8 O4' A A 310 136.907 -69.493 189.493 1.00 62.61 O
ATOM 9 C3' A A 310 135.676 -69.045 187.587 1.00 63.22 C
ATOM 10 O3' A A 310 134.399 -69.026 187.024 1.00 63.50 O
ATOM 11 C2' A A 310 136.109 -67.710 188.163 1.00 62.43 C
ATOM 12 O2' A A 310 135.031 -67.089 188.854 1.00 61.98 O
ATOM 13 C1' A A 310 137.145 -68.143 189.178 1.00 62.17 C
ATOM 14 N9 A A 310 138.524 -68.011 188.681 1.00 62.24 N
ATOM 15 C8 A A 310 139.349 -68.972 188.197 1.00 62.78 C
ATOM 16 N7 A A 310 140.544 -68.541 187.896 1.00 62.68 N
ATOM 17 C5 A A 310 140.510 -67.215 188.242 1.00 62.01 C
ATOM 18 C6 A A 310 141.477 -66.206 188.176 1.00 61.60 C
ATOM 19 N6 A A 310 142.705 -66.404 187.713 1.00 61.82 N
ATOM 20 N1 A A 310 141.155 -64.976 188.595 1.00 60.96 N
ATOM 21 C2 A A 310 139.910 -64.798 189.045 1.00 60.76 C
ATOM 22 N3 A A 310 138.905 -65.659 189.171 1.00 61.09 N
ATOM 23 C4 A A 310 139.282 -66.875 188.738 1.00 61.73 C
ATOM 24 P U A 311 134.237 -68.607 185.513 1.00 64.41 P
ATOM 25 OP1 U A 311 132.794 -68.657 185.207 1.00 64.65 O
ATOM 26 OP2 U A 311 135.184 -69.423 184.728 1.00 65.01 O
ATOM 27 O5' U A 311 134.712 -67.112 185.536 1.00 63.77 O
TER

ATOM 1 O3' C B 66 132.051 -55.906 192.523 1.00 54.61 O
ATOM 2 P A B 67 132.346 -56.813 193.791 1.00 57.96 P
ATOM 3 OP1 A B 67 132.464 -55.902 194.952 1.00 57.24 O
ATOM 4 OP2 A B 67 133.489 -57.690 193.472 1.00 58.30 O
ATOM 5 O5' A B 67 131.027 -57.667 193.885 1.00 58.32 O
ATOM 6 C5' A B 67 131.053 -58.970 194.420 1.00 58.60 C
ATOM 7 C4' A B 67 130.457 -59.962 193.468 1.00 59.34 C
ATOM 8 O4' A B 67 131.196 -59.969 192.223 1.00 59.72 O
ATOM 9 C3' A B 67 130.483 -61.389 193.938 1.00 59.70 C
ATOM 10 O3' A B 67 129.397 -61.655 194.798 1.00 59.59 O
ATOM 11 C2' A B 67 130.460 -62.191 192.625 1.00 60.46 C
ATOM 12 O2' A B 67 129.127 -62.355 192.139 1.00 60.80 O
ATOM 13 C1' A B 67 131.201 -61.262 191.666 1.00 60.39 C
ATOM 14 N9 A B 67 132.603 -61.668 191.417 1.00 60.53 N
ATOM 15 C8 A B 67 133.692 -60.899 191.663 1.00 60.08 C
ATOM 16 N7 A B 67 134.824 -61.419 191.321 1.00 60.33 N
ATOM 17 C5 A B 67 134.470 -62.613 190.782 1.00 60.99 C
ATOM 18 C6 A B 67 135.253 -63.632 190.224 1.00 61.54 C
ATOM 19 N6 A B 67 136.582 -63.584 190.132 1.00 61.48 N
ATOM 20 N1 A B 67 134.603 -64.720 189.729 1.00 62.18 N
ATOM 21 C2 A B 67 133.263 -64.741 189.823 1.00 62.24 C
ATOM 22 N3 A B 67 132.439 -63.824 190.335 1.00 61.75 N
ATOM 23 C4 A B 67 133.109 -62.772 190.806 1.00 61.13 C
ATOM 24 P A B 68 129.597 -62.445 196.169 1.00 57.59 P
ATOM 25 OP1 A B 68 128.244 -62.622 196.762 1.00 57.58 O
ATOM 26 OP2 A B 68 130.634 -61.729 196.965 1.00 56.97 O
ATOM 27 O5' A B 68 130.146 -63.853 195.671 1.00 58.25 O
TER

Atoms:
OP1: (136.455,-73.725,186.439)
OP2: (138.846,-72.797,186.266)
C3': (135.676,-69.045,187.587)
C1': (137.145,-68.143,189.178)
C5': (135.973,-71.421,188.397)
O4': (136.907,-69.493,189.493)
C8: (139.349,-68.972,188.197)
O2': (135.031,-67.089,188.854)
C6: (141.477,-66.206,188.176)
C5: (140.510,-67.215,188.242)
C4: (139.282,-66.875,188.738)
P: (137.590,-72.973,187.044)
C4': (135.765,-69.979,188.759)
C2': (136.109,-67.710,188.163)
C2: (139.910,-64.798,189.045)
N1: (141.155,-64.976,188.595)
N3: (138.905,-65.659,189.171)
N6: (142.705,-66.404,187.713)
N7: (140.544,-68.541,187.896)
N9: (138.524,-68.011,188.681)
O5': (137.092,-71.558,187.542)
O3': (134.399,-69.026,187.024)
OP1: (132.464,-55.902,194.952)
OP2: (133.489,-57.690,193.472)
C3': (130.483,-61.389,193.938)
C1': (131.201,-61.262,191.666)
C5': (131.053,-58.970,194.420)
O4': (131.196,-59.969,192.223)
C8: (133.692,-60.899,191.663)
O2': (129.127,-62.355,192.139)
C6: (135.253,-63.632,190.224)
C5: (134.470,-62.613,190.782)
C4: (133.109,-62.772,190.806)
P: (132.346,-56.813,193.791)
C4': (130.457,-59.962,193.468)
C2': (130.460,-62.191,192.625)
C2: (133.263,-64.741,189.823)
N1: (134.603,-64.720,189.729)
N3: (132.439,-63.824,190.335)
N6: (136.582,-63.584,190.132)
N7: (134.824,-61.419,191.321)
N9: (132.603,-61.668,191.417)
O5': (131.027,-57.667,193.885)
O3': (129.397,-61.655,194.798)
Image (generated by PyMOL):
PyMOL image
show in jmol