Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21507:21590
Extra
PDB:
ATOM 1 O3' A A1506 -79.000 -77.930 55.604 1.00 80.24 O
ATOM 2 P A A1507 -78.608 -79.295 56.325 1.00 94.12 P
ATOM 3 OP1 A A1507 -77.847 -80.113 55.355 1.00 94.03 O
ATOM 4 OP2 A A1507 -79.847 -79.815 56.874 1.00 94.84 O
ATOM 5 O5' A A1507 -77.664 -78.828 57.513 1.00 93.84 O
ATOM 6 C5' A A1507 -76.497 -78.064 57.275 1.00 93.12 C
ATOM 7 C4' A A1507 -76.211 -77.145 58.432 1.00 92.87 C
ATOM 8 O4' A A1507 -77.254 -76.141 58.530 1.00 92.82 O
ATOM 9 C3' A A1507 -76.201 -77.781 59.812 1.00 93.40 C
ATOM 10 O3' A A1507 -75.009 -78.491 60.093 1.00 93.39 O
ATOM 11 C2' A A1507 -76.432 -76.577 60.714 1.00 93.17 C
ATOM 12 O2' A A1507 -75.249 -75.803 60.837 1.00 92.51 O
ATOM 13 C1' A A1507 -77.440 -75.781 59.884 1.00 93.00 C
ATOM 14 N9 A A1507 -78.831 -76.087 60.263 1.00 93.66 N
ATOM 15 C8 A A1507 -79.652 -77.014 59.700 1.00 94.20 C
ATOM 16 N7 A A1507 -80.841 -77.077 60.261 1.00 94.75 N
ATOM 17 C5 A A1507 -80.792 -76.128 61.256 1.00 94.56 C
ATOM 18 C6 A A1507 -81.731 -75.717 62.202 1.00 94.94 C
ATOM 19 N6 A A1507 -82.947 -76.229 62.289 1.00 95.62 N
ATOM 20 N1 A A1507 -81.379 -74.750 63.071 1.00 94.62 N
ATOM 21 C2 A A1507 -80.147 -74.250 62.975 1.00 93.96 C
ATOM 22 N3 A A1507 -79.175 -74.563 62.123 1.00 93.56 N
ATOM 23 C4 A A1507 -79.561 -75.517 61.275 1.00 93.89 C
ATOM 24 P A A1508 -75.000 -79.668 61.185 1.00 97.53 P
ATOM 25 OP1 A A1508 -73.673 -80.313 61.110 1.00 97.41 O
ATOM 26 OP2 A A1508 -76.211 -80.495 60.960 1.00 98.20 O
ATOM 27 O5' A A1508 -75.136 -78.887 62.555 1.00 97.55 O
TER
ATOM 1 O3' G B1589 -88.577 -69.326 63.925 1.00 89.61 O
ATOM 2 P U B1590 -88.391 -69.918 65.398 1.00 86.70 P
ATOM 3 OP1 U B1590 -89.566 -70.767 65.700 1.00 87.61 O
ATOM 4 OP2 U B1590 -88.093 -68.774 66.286 1.00 86.36 O
ATOM 5 O5' U B1590 -87.116 -70.841 65.227 1.00 86.44 O
ATOM 6 C5' U B1590 -87.238 -72.090 64.575 1.00 86.81 C
ATOM 7 C4' U B1590 -85.977 -72.895 64.678 1.00 86.60 C
ATOM 8 O4' U B1590 -84.872 -72.165 64.100 1.00 85.74 O
ATOM 9 C3' U B1590 -85.506 -73.213 66.078 1.00 86.85 C
ATOM 10 O3' U B1590 -86.236 -74.272 66.658 1.00 87.72 O
ATOM 11 C2' U B1590 -84.023 -73.517 65.859 1.00 86.32 C
ATOM 12 O2' U B1590 -83.845 -74.829 65.343 1.00 86.65 O
ATOM 13 C1' U B1590 -83.675 -72.523 64.751 1.00 85.54 C
ATOM 14 N1 U B1590 -83.061 -71.302 65.264 1.00 84.95 N
ATOM 15 C2 U B1590 -81.681 -71.208 65.435 1.00 84.42 C
ATOM 16 O2 U B1590 -80.907 -72.129 65.220 1.00 84.44 O
ATOM 17 N3 U B1590 -81.251 -69.984 65.894 1.00 83.90 N
ATOM 18 C4 U B1590 -82.043 -68.900 66.164 1.00 83.86 C
ATOM 19 O4 U B1590 -81.552 -67.876 66.563 1.00 83.39 O
ATOM 20 C5 U B1590 -83.429 -69.068 65.945 1.00 84.42 C
ATOM 21 C6 U B1590 -83.892 -70.237 65.500 1.00 84.93 C
ATOM 22 P U B1591 -86.367 -74.391 68.240 1.00 96.38 P
ATOM 23 OP1 U B1591 -86.996 -75.703 68.517 1.00 97.26 O
ATOM 24 OP2 U B1591 -87.035 -73.154 68.721 1.00 96.30 O
ATOM 25 O5' U B1591 -84.861 -74.423 68.726 1.00 95.91 O
TER
ATOM 2 P A A1507 -78.608 -79.295 56.325 1.00 94.12 P
ATOM 3 OP1 A A1507 -77.847 -80.113 55.355 1.00 94.03 O
ATOM 4 OP2 A A1507 -79.847 -79.815 56.874 1.00 94.84 O
ATOM 5 O5' A A1507 -77.664 -78.828 57.513 1.00 93.84 O
ATOM 6 C5' A A1507 -76.497 -78.064 57.275 1.00 93.12 C
ATOM 7 C4' A A1507 -76.211 -77.145 58.432 1.00 92.87 C
ATOM 8 O4' A A1507 -77.254 -76.141 58.530 1.00 92.82 O
ATOM 9 C3' A A1507 -76.201 -77.781 59.812 1.00 93.40 C
ATOM 10 O3' A A1507 -75.009 -78.491 60.093 1.00 93.39 O
ATOM 11 C2' A A1507 -76.432 -76.577 60.714 1.00 93.17 C
ATOM 12 O2' A A1507 -75.249 -75.803 60.837 1.00 92.51 O
ATOM 13 C1' A A1507 -77.440 -75.781 59.884 1.00 93.00 C
ATOM 14 N9 A A1507 -78.831 -76.087 60.263 1.00 93.66 N
ATOM 15 C8 A A1507 -79.652 -77.014 59.700 1.00 94.20 C
ATOM 16 N7 A A1507 -80.841 -77.077 60.261 1.00 94.75 N
ATOM 17 C5 A A1507 -80.792 -76.128 61.256 1.00 94.56 C
ATOM 18 C6 A A1507 -81.731 -75.717 62.202 1.00 94.94 C
ATOM 19 N6 A A1507 -82.947 -76.229 62.289 1.00 95.62 N
ATOM 20 N1 A A1507 -81.379 -74.750 63.071 1.00 94.62 N
ATOM 21 C2 A A1507 -80.147 -74.250 62.975 1.00 93.96 C
ATOM 22 N3 A A1507 -79.175 -74.563 62.123 1.00 93.56 N
ATOM 23 C4 A A1507 -79.561 -75.517 61.275 1.00 93.89 C
ATOM 24 P A A1508 -75.000 -79.668 61.185 1.00 97.53 P
ATOM 25 OP1 A A1508 -73.673 -80.313 61.110 1.00 97.41 O
ATOM 26 OP2 A A1508 -76.211 -80.495 60.960 1.00 98.20 O
ATOM 27 O5' A A1508 -75.136 -78.887 62.555 1.00 97.55 O
TER
ATOM 1 O3' G B1589 -88.577 -69.326 63.925 1.00 89.61 O
ATOM 2 P U B1590 -88.391 -69.918 65.398 1.00 86.70 P
ATOM 3 OP1 U B1590 -89.566 -70.767 65.700 1.00 87.61 O
ATOM 4 OP2 U B1590 -88.093 -68.774 66.286 1.00 86.36 O
ATOM 5 O5' U B1590 -87.116 -70.841 65.227 1.00 86.44 O
ATOM 6 C5' U B1590 -87.238 -72.090 64.575 1.00 86.81 C
ATOM 7 C4' U B1590 -85.977 -72.895 64.678 1.00 86.60 C
ATOM 8 O4' U B1590 -84.872 -72.165 64.100 1.00 85.74 O
ATOM 9 C3' U B1590 -85.506 -73.213 66.078 1.00 86.85 C
ATOM 10 O3' U B1590 -86.236 -74.272 66.658 1.00 87.72 O
ATOM 11 C2' U B1590 -84.023 -73.517 65.859 1.00 86.32 C
ATOM 12 O2' U B1590 -83.845 -74.829 65.343 1.00 86.65 O
ATOM 13 C1' U B1590 -83.675 -72.523 64.751 1.00 85.54 C
ATOM 14 N1 U B1590 -83.061 -71.302 65.264 1.00 84.95 N
ATOM 15 C2 U B1590 -81.681 -71.208 65.435 1.00 84.42 C
ATOM 16 O2 U B1590 -80.907 -72.129 65.220 1.00 84.44 O
ATOM 17 N3 U B1590 -81.251 -69.984 65.894 1.00 83.90 N
ATOM 18 C4 U B1590 -82.043 -68.900 66.164 1.00 83.86 C
ATOM 19 O4 U B1590 -81.552 -67.876 66.563 1.00 83.39 O
ATOM 20 C5 U B1590 -83.429 -69.068 65.945 1.00 84.42 C
ATOM 21 C6 U B1590 -83.892 -70.237 65.500 1.00 84.93 C
ATOM 22 P U B1591 -86.367 -74.391 68.240 1.00 96.38 P
ATOM 23 OP1 U B1591 -86.996 -75.703 68.517 1.00 97.26 O
ATOM 24 OP2 U B1591 -87.035 -73.154 68.721 1.00 96.30 O
ATOM 25 O5' U B1591 -84.861 -74.423 68.726 1.00 95.91 O
TER
Atoms:
OP1: (-77.847,-80.113,55.355)
OP2: (-79.847,-79.815,56.874)
C3': (-76.201,-77.781,59.812)
C1': (-77.440,-75.781,59.884)
C5': (-76.497,-78.064,57.275)
O4': (-77.254,-76.141,58.530)
C8: (-79.652,-77.014,59.700)
O2': (-75.249,-75.803,60.837)
C6: (-81.731,-75.717,62.202)
C5: (-80.792,-76.128,61.256)
C4: (-79.561,-75.517,61.275)
P: (-78.608,-79.295,56.325)
C4': (-76.211,-77.145,58.432)
C2': (-76.432,-76.577,60.714)
C2: (-80.147,-74.250,62.975)
N1: (-81.379,-74.750,63.071)
N3: (-79.175,-74.563,62.123)
N6: (-82.947,-76.229,62.289)
N7: (-80.841,-77.077,60.261)
N9: (-78.831,-76.087,60.263)
O5': (-77.664,-78.828,57.513)
O3': (-75.009,-78.491,60.093)
OP2: (-79.847,-79.815,56.874)
C3': (-76.201,-77.781,59.812)
C1': (-77.440,-75.781,59.884)
C5': (-76.497,-78.064,57.275)
O4': (-77.254,-76.141,58.530)
C8: (-79.652,-77.014,59.700)
O2': (-75.249,-75.803,60.837)
C6: (-81.731,-75.717,62.202)
C5: (-80.792,-76.128,61.256)
C4: (-79.561,-75.517,61.275)
P: (-78.608,-79.295,56.325)
C4': (-76.211,-77.145,58.432)
C2': (-76.432,-76.577,60.714)
C2: (-80.147,-74.250,62.975)
N1: (-81.379,-74.750,63.071)
N3: (-79.175,-74.563,62.123)
N6: (-82.947,-76.229,62.289)
N7: (-80.841,-77.077,60.261)
N9: (-78.831,-76.087,60.263)
O5': (-77.664,-78.828,57.513)
O3': (-75.009,-78.491,60.093)
C4: (-82.043,-68.900,66.164)
N3: (-81.251,-69.984,65.894)
OP1: (-89.566,-70.767,65.700)
OP2: (-88.093,-68.774,66.286)
C2: (-81.681,-71.208,65.435)
C1': (-83.675,-72.523,64.751)
C3': (-85.506,-73.213,66.078)
O5': (-87.116,-70.841,65.227)
O4': (-84.872,-72.165,64.100)
C5': (-87.238,-72.090,64.575)
P: (-88.391,-69.918,65.398)
C4': (-85.977,-72.895,64.678)
C2': (-84.023,-73.517,65.859)
O2': (-83.845,-74.829,65.343)
N1: (-83.061,-71.302,65.264)
O4: (-81.552,-67.876,66.563)
O2: (-80.907,-72.129,65.220)
C6: (-83.892,-70.237,65.500)
C5: (-83.429,-69.068,65.945)
O3': (-86.236,-74.272,66.658)
N3: (-81.251,-69.984,65.894)
OP1: (-89.566,-70.767,65.700)
OP2: (-88.093,-68.774,66.286)
C2: (-81.681,-71.208,65.435)
C1': (-83.675,-72.523,64.751)
C3': (-85.506,-73.213,66.078)
O5': (-87.116,-70.841,65.227)
O4': (-84.872,-72.165,64.100)
C5': (-87.238,-72.090,64.575)
P: (-88.391,-69.918,65.398)
C4': (-85.977,-72.895,64.678)
C2': (-84.023,-73.517,65.859)
O2': (-83.845,-74.829,65.343)
N1: (-83.061,-71.302,65.264)
O4: (-81.552,-67.876,66.563)
O2: (-80.907,-72.129,65.220)
C6: (-83.892,-70.237,65.500)
C5: (-83.429,-69.068,65.945)
O3': (-86.236,-74.272,66.658)
Image (generated by PyMOL):