ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1IL2:C45:C21

Extra

PDB:
ATOM 1 O3' G A 44 19.804 42.859 15.668 1.00 54.85 O
ATOM 2 P A A 45 20.960 43.574 14.812 1.00 52.87 P
ATOM 3 OP1 A A 45 22.237 43.355 15.531 1.00 50.24 O
ATOM 4 OP2 A A 45 20.502 44.955 14.526 1.00 54.95 O
ATOM 5 O5' A A 45 20.993 42.762 13.444 1.00 50.10 O
ATOM 6 C5' A A 45 21.161 41.337 13.453 1.00 50.08 C
ATOM 7 C4' A A 45 20.802 40.765 12.110 1.00 50.60 C
ATOM 8 O4' A A 45 19.410 41.050 11.831 1.00 51.98 O
ATOM 9 C3' A A 45 21.562 41.330 10.923 1.00 51.72 C
ATOM 10 O3' A A 45 22.810 40.661 10.749 1.00 55.83 O
ATOM 11 C2' A A 45 20.596 41.090 9.763 1.00 51.10 C
ATOM 12 O2' A A 45 20.663 39.780 9.232 1.00 46.92 O
ATOM 13 C1' A A 45 19.238 41.273 10.438 1.00 50.62 C
ATOM 14 N9 A A 45 18.685 42.618 10.262 1.00 50.97 N
ATOM 15 C8 A A 45 19.167 43.787 10.782 1.00 49.55 C
ATOM 16 N7 A A 45 18.468 44.846 10.449 1.00 51.15 N
ATOM 17 C5 A A 45 17.455 44.332 9.652 1.00 48.07 C
ATOM 18 C6 A A 45 16.389 44.953 8.975 1.00 51.75 C
ATOM 19 N6 A A 45 16.166 46.267 8.990 1.00 46.90 N
ATOM 20 N1 A A 45 15.549 44.155 8.272 1.00 50.68 N
ATOM 21 C2 A A 45 15.789 42.840 8.245 1.00 52.82 C
ATOM 22 N3 A A 45 16.766 42.146 8.835 1.00 52.53 N
ATOM 23 C4 A A 45 17.574 42.964 9.527 1.00 50.73 C
ATOM 24 P U A 46 24.043 41.434 10.063 1.00 57.97 P
ATOM 25 OP1 U A 46 25.217 40.526 10.065 1.00 55.19 O
ATOM 26 OP2 U A 46 24.139 42.765 10.709 1.00 60.08 O
ATOM 27 O5' U A 46 23.570 41.655 8.559 1.00 60.63 O
TER

ATOM 1 O3' A B 20 16.317 51.205 7.287 1.00 70.69 O
ATOM 2 P G B 21 15.656 51.089 8.743 1.00 70.07 P
ATOM 3 OP1 G B 21 15.929 52.344 9.481 1.00 72.20 O
ATOM 4 OP2 G B 21 16.059 49.791 9.334 1.00 73.76 O
ATOM 5 O5' G B 21 14.101 51.036 8.424 1.00 65.85 O
ATOM 6 C5' G B 21 13.493 52.066 7.640 1.00 60.18 C
ATOM 7 C4' G B 21 12.249 51.546 6.977 1.00 60.05 C
ATOM 8 O4' G B 21 12.601 50.610 5.927 1.00 61.80 O
ATOM 9 C3' G B 21 11.326 50.758 7.885 1.00 60.18 C
ATOM 10 O3' G B 21 10.517 51.587 8.689 1.00 60.02 O
ATOM 11 C2' G B 21 10.549 49.905 6.894 1.00 62.74 C
ATOM 12 O2' G B 21 9.514 50.607 6.238 1.00 57.94 O
ATOM 13 C1' G B 21 11.638 49.566 5.879 1.00 64.10 C
ATOM 14 N9 G B 21 12.298 48.323 6.264 1.00 65.19 N
ATOM 15 C8 G B 21 13.526 48.188 6.859 1.00 64.06 C
ATOM 16 N7 G B 21 13.842 46.947 7.109 1.00 66.22 N
ATOM 17 C5 G B 21 12.755 46.220 6.647 1.00 66.98 C
ATOM 18 C6 G B 21 12.523 44.830 6.649 1.00 67.67 C
ATOM 19 O6 G B 21 13.256 43.932 7.078 1.00 68.25 O
ATOM 20 N1 G B 21 11.290 44.516 6.085 1.00 65.26 N
ATOM 21 C2 G B 21 10.393 45.430 5.585 1.00 64.03 C
ATOM 22 N2 G B 21 9.249 44.935 5.082 1.00 58.11 N
ATOM 23 N3 G B 21 10.601 46.734 5.579 1.00 63.76 N
ATOM 24 C4 G B 21 11.795 47.055 6.120 1.00 64.89 C
ATOM 25 P A B 22 10.189 51.135 10.194 1.00 61.89 P
ATOM 26 OP1 A B 22 9.623 52.306 10.913 1.00 63.60 O
ATOM 27 OP2 A B 22 11.397 50.457 10.737 1.00 60.04 O
ATOM 28 O5' A B 22 9.023 50.070 9.985 1.00 62.90 O
TER

Atoms:
OP1: (22.237,43.355,15.531)
OP2: (20.502,44.955,14.526)
C3': (21.562,41.330,10.923)
C1': (19.238,41.273,10.438)
C5': (21.161,41.337,13.453)
O4': (19.410,41.050,11.831)
C8: (19.167,43.787,10.782)
O2': (20.663,39.780,9.232)
C6: (16.389,44.953,8.975)
C5: (17.455,44.332,9.652)
C4: (17.574,42.964,9.527)
P: (20.960,43.574,14.812)
C4': (20.802,40.765,12.110)
C2': (20.596,41.090,9.763)
C2: (15.789,42.840,8.245)
N1: (15.549,44.155,8.272)
N3: (16.766,42.146,8.835)
N6: (16.166,46.267,8.990)
N7: (18.468,44.846,10.449)
N9: (18.685,42.618,10.262)
O5': (20.993,42.762,13.444)
O3': (22.810,40.661,10.749)
OP1: (15.929,52.344,9.481)
OP2: (16.059,49.791,9.334)
C3': (11.326,50.758,7.885)
C1': (11.638,49.566,5.879)
C5': (13.493,52.066,7.640)
O6: (13.256,43.932,7.078)
O4': (12.601,50.610,5.927)
C8: (13.526,48.188,6.859)
C2: (10.393,45.430,5.585)
C6: (12.523,44.830,6.649)
C5: (12.755,46.220,6.647)
C4: (11.795,47.055,6.120)
P: (15.656,51.089,8.743)
C4': (12.249,51.546,6.977)
C2': (10.549,49.905,6.894)
O2': (9.514,50.607,6.238)
N1: (11.290,44.516,6.085)
N2: (9.249,44.935,5.082)
N3: (10.601,46.734,5.579)
N7: (13.842,46.947,7.109)
N9: (12.298,48.323,6.264)
O5': (14.101,51.036,8.424)
O3': (10.517,51.587,8.689)
Image (generated by PyMOL):
PyMOL image
show in jmol