Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2TRA:A45:A21
Extra
PDB:
ATOM 1 O3' G A 44 2.282 6.008 -0.239 1.00 4.71 O
ATOM 2 P A A 45 1.937 6.494 1.256 1.00 1.00 P
ATOM 3 OP1 A A 45 1.279 5.407 2.048 1.00 1.00 O
ATOM 4 OP2 A A 45 1.101 7.702 1.106 1.00 11.43 O
ATOM 5 O5' A A 45 3.327 6.872 1.914 1.00 1.00 O
ATOM 6 C5' A A 45 3.807 5.731 2.721 1.00 1.00 C
ATOM 7 C4' A A 45 5.301 5.798 2.526 1.00 1.00 C
ATOM 8 O4' A A 45 5.615 6.541 1.375 1.00 1.00 O
ATOM 9 C3' A A 45 6.039 6.534 3.648 1.00 1.00 C
ATOM 10 O3' A A 45 6.285 5.731 4.799 1.00 1.58 O
ATOM 11 C2' A A 45 7.319 6.993 2.960 1.00 1.00 C
ATOM 12 O2' A A 45 8.204 5.872 2.990 1.00 1.00 O
ATOM 13 C1' A A 45 6.814 7.290 1.585 1.00 1.00 C
ATOM 14 N9 A A 45 6.464 8.714 1.465 1.00 1.00 N
ATOM 15 C8 A A 45 5.227 9.254 1.749 1.00 1.00 C
ATOM 16 N7 A A 45 5.178 10.550 1.570 1.00 1.00 N
ATOM 17 C5 A A 45 6.451 10.881 1.136 1.00 1.00 C
ATOM 18 C6 A A 45 7.023 12.123 0.762 1.00 1.00 C
ATOM 19 N6 A A 45 6.378 13.277 0.777 1.00 7.21 N
ATOM 20 N1 A A 45 8.327 12.062 0.374 1.00 1.00 N
ATOM 21 C2 A A 45 9.010 10.894 0.359 1.00 1.00 C
ATOM 22 N3 A A 45 8.530 9.700 0.703 1.00 1.00 N
ATOM 23 C4 A A 45 7.245 9.760 1.076 1.00 1.00 C
ATOM 24 P U A 46 5.529 5.987 6.189 1.00 1.00 P
ATOM 25 OP1 U A 46 5.498 4.664 6.907 1.00 1.51 O
ATOM 26 OP2 U A 46 4.151 6.453 5.920 1.00 1.00 O
ATOM 27 O5' U A 46 6.433 7.108 6.847 1.00 1.00 O
TER
ATOM 1 O3' A B 20 4.391 17.779 1.674 1.00 16.40 O
ATOM 2 P G B 21 3.795 17.253 0.299 1.00 9.57 P
ATOM 3 OP1 G B 21 2.374 17.705 0.120 1.00 20.12 O
ATOM 4 OP2 G B 21 3.838 15.775 0.404 1.00 21.29 O
ATOM 5 O5' G B 21 4.772 17.948 -0.762 1.00 3.66 O
ATOM 6 C5' G B 21 5.037 19.352 -0.508 1.00 6.48 C
ATOM 7 C4' G B 21 6.396 19.676 -1.091 1.00 3.58 C
ATOM 8 O4' G B 21 7.398 19.042 -0.314 1.00 10.71 O
ATOM 9 C3' G B 21 6.630 19.177 -2.497 1.00 2.92 C
ATOM 10 O3' G B 21 6.082 20.034 -3.513 1.00 5.33 O
ATOM 11 C2' G B 21 8.155 19.082 -2.571 1.00 4.66 C
ATOM 12 O2' G B 21 8.622 20.372 -2.900 1.00 4.01 O
ATOM 13 C1' G B 21 8.493 18.670 -1.151 1.00 7.96 C
ATOM 14 N9 G B 21 8.690 17.226 -1.046 1.00 8.08 N
ATOM 15 C8 G B 21 7.829 16.315 -0.463 1.00 12.71 C
ATOM 16 N7 G B 21 8.272 15.080 -0.493 1.00 6.92 N
ATOM 17 C5 G B 21 9.508 15.201 -1.121 1.00 2.95 C
ATOM 18 C6 G B 21 10.480 14.229 -1.465 1.00 7.58 C
ATOM 19 O6 G B 21 10.430 13.014 -1.241 1.00 17.44 O
ATOM 20 N1 G B 21 11.568 14.749 -2.093 1.00 4.91 N
ATOM 21 C2 G B 21 11.734 16.058 -2.362 1.00 7.03 C
ATOM 22 N2 G B 21 12.878 16.375 -2.990 1.00 9.67 N
ATOM 23 N3 G B 21 10.861 17.024 -2.078 1.00 9.64 N
ATOM 24 C4 G B 21 9.772 16.510 -1.450 1.00 5.43 C
ATOM 25 P A B 22 5.455 19.237 -4.784 1.00 6.57 P
ATOM 26 OP1 A B 22 4.963 20.162 -5.831 1.00 1.30 O
ATOM 27 OP2 A B 22 4.379 18.387 -4.201 1.00 1.67 O
ATOM 28 O5' A B 22 6.753 18.427 -5.247 1.00 4.58 O
TER
ATOM 2 P A A 45 1.937 6.494 1.256 1.00 1.00 P
ATOM 3 OP1 A A 45 1.279 5.407 2.048 1.00 1.00 O
ATOM 4 OP2 A A 45 1.101 7.702 1.106 1.00 11.43 O
ATOM 5 O5' A A 45 3.327 6.872 1.914 1.00 1.00 O
ATOM 6 C5' A A 45 3.807 5.731 2.721 1.00 1.00 C
ATOM 7 C4' A A 45 5.301 5.798 2.526 1.00 1.00 C
ATOM 8 O4' A A 45 5.615 6.541 1.375 1.00 1.00 O
ATOM 9 C3' A A 45 6.039 6.534 3.648 1.00 1.00 C
ATOM 10 O3' A A 45 6.285 5.731 4.799 1.00 1.58 O
ATOM 11 C2' A A 45 7.319 6.993 2.960 1.00 1.00 C
ATOM 12 O2' A A 45 8.204 5.872 2.990 1.00 1.00 O
ATOM 13 C1' A A 45 6.814 7.290 1.585 1.00 1.00 C
ATOM 14 N9 A A 45 6.464 8.714 1.465 1.00 1.00 N
ATOM 15 C8 A A 45 5.227 9.254 1.749 1.00 1.00 C
ATOM 16 N7 A A 45 5.178 10.550 1.570 1.00 1.00 N
ATOM 17 C5 A A 45 6.451 10.881 1.136 1.00 1.00 C
ATOM 18 C6 A A 45 7.023 12.123 0.762 1.00 1.00 C
ATOM 19 N6 A A 45 6.378 13.277 0.777 1.00 7.21 N
ATOM 20 N1 A A 45 8.327 12.062 0.374 1.00 1.00 N
ATOM 21 C2 A A 45 9.010 10.894 0.359 1.00 1.00 C
ATOM 22 N3 A A 45 8.530 9.700 0.703 1.00 1.00 N
ATOM 23 C4 A A 45 7.245 9.760 1.076 1.00 1.00 C
ATOM 24 P U A 46 5.529 5.987 6.189 1.00 1.00 P
ATOM 25 OP1 U A 46 5.498 4.664 6.907 1.00 1.51 O
ATOM 26 OP2 U A 46 4.151 6.453 5.920 1.00 1.00 O
ATOM 27 O5' U A 46 6.433 7.108 6.847 1.00 1.00 O
TER
ATOM 1 O3' A B 20 4.391 17.779 1.674 1.00 16.40 O
ATOM 2 P G B 21 3.795 17.253 0.299 1.00 9.57 P
ATOM 3 OP1 G B 21 2.374 17.705 0.120 1.00 20.12 O
ATOM 4 OP2 G B 21 3.838 15.775 0.404 1.00 21.29 O
ATOM 5 O5' G B 21 4.772 17.948 -0.762 1.00 3.66 O
ATOM 6 C5' G B 21 5.037 19.352 -0.508 1.00 6.48 C
ATOM 7 C4' G B 21 6.396 19.676 -1.091 1.00 3.58 C
ATOM 8 O4' G B 21 7.398 19.042 -0.314 1.00 10.71 O
ATOM 9 C3' G B 21 6.630 19.177 -2.497 1.00 2.92 C
ATOM 10 O3' G B 21 6.082 20.034 -3.513 1.00 5.33 O
ATOM 11 C2' G B 21 8.155 19.082 -2.571 1.00 4.66 C
ATOM 12 O2' G B 21 8.622 20.372 -2.900 1.00 4.01 O
ATOM 13 C1' G B 21 8.493 18.670 -1.151 1.00 7.96 C
ATOM 14 N9 G B 21 8.690 17.226 -1.046 1.00 8.08 N
ATOM 15 C8 G B 21 7.829 16.315 -0.463 1.00 12.71 C
ATOM 16 N7 G B 21 8.272 15.080 -0.493 1.00 6.92 N
ATOM 17 C5 G B 21 9.508 15.201 -1.121 1.00 2.95 C
ATOM 18 C6 G B 21 10.480 14.229 -1.465 1.00 7.58 C
ATOM 19 O6 G B 21 10.430 13.014 -1.241 1.00 17.44 O
ATOM 20 N1 G B 21 11.568 14.749 -2.093 1.00 4.91 N
ATOM 21 C2 G B 21 11.734 16.058 -2.362 1.00 7.03 C
ATOM 22 N2 G B 21 12.878 16.375 -2.990 1.00 9.67 N
ATOM 23 N3 G B 21 10.861 17.024 -2.078 1.00 9.64 N
ATOM 24 C4 G B 21 9.772 16.510 -1.450 1.00 5.43 C
ATOM 25 P A B 22 5.455 19.237 -4.784 1.00 6.57 P
ATOM 26 OP1 A B 22 4.963 20.162 -5.831 1.00 1.30 O
ATOM 27 OP2 A B 22 4.379 18.387 -4.201 1.00 1.67 O
ATOM 28 O5' A B 22 6.753 18.427 -5.247 1.00 4.58 O
TER
Atoms:
OP1: (1.279,5.407,2.048)
OP2: (1.101,7.702,1.106)
C3': (6.039,6.534,3.648)
C1': (6.814,7.290,1.585)
C5': (3.807,5.731,2.721)
O4': (5.615,6.541,1.375)
C8: (5.227,9.254,1.749)
O2': (8.204,5.872,2.990)
C6: (7.023,12.123,0.762)
C5: (6.451,10.881,1.136)
C4: (7.245,9.760,1.076)
P: (1.937,6.494,1.256)
C4': (5.301,5.798,2.526)
C2': (7.319,6.993,2.960)
C2: (9.010,10.894,0.359)
N1: (8.327,12.062,0.374)
N3: (8.530,9.700,0.703)
N6: (6.378,13.277,0.777)
N7: (5.178,10.550,1.570)
N9: (6.464,8.714,1.465)
O5': (3.327,6.872,1.914)
O3': (6.285,5.731,4.799)
OP2: (1.101,7.702,1.106)
C3': (6.039,6.534,3.648)
C1': (6.814,7.290,1.585)
C5': (3.807,5.731,2.721)
O4': (5.615,6.541,1.375)
C8: (5.227,9.254,1.749)
O2': (8.204,5.872,2.990)
C6: (7.023,12.123,0.762)
C5: (6.451,10.881,1.136)
C4: (7.245,9.760,1.076)
P: (1.937,6.494,1.256)
C4': (5.301,5.798,2.526)
C2': (7.319,6.993,2.960)
C2: (9.010,10.894,0.359)
N1: (8.327,12.062,0.374)
N3: (8.530,9.700,0.703)
N6: (6.378,13.277,0.777)
N7: (5.178,10.550,1.570)
N9: (6.464,8.714,1.465)
O5': (3.327,6.872,1.914)
O3': (6.285,5.731,4.799)
OP1: (2.374,17.705,0.120)
OP2: (3.838,15.775,0.404)
C3': (6.630,19.177,-2.497)
C1': (8.493,18.670,-1.151)
C5': (5.037,19.352,-0.508)
O6: (10.430,13.014,-1.241)
O4': (7.398,19.042,-0.314)
C8: (7.829,16.315,-0.463)
C2: (11.734,16.058,-2.362)
C6: (10.480,14.229,-1.465)
C5: (9.508,15.201,-1.121)
C4: (9.772,16.510,-1.450)
P: (3.795,17.253,0.299)
C4': (6.396,19.676,-1.091)
C2': (8.155,19.082,-2.571)
O2': (8.622,20.372,-2.900)
N1: (11.568,14.749,-2.093)
N2: (12.878,16.375,-2.990)
N3: (10.861,17.024,-2.078)
N7: (8.272,15.080,-0.493)
N9: (8.690,17.226,-1.046)
O5': (4.772,17.948,-0.762)
O3': (6.082,20.034,-3.513)
OP2: (3.838,15.775,0.404)
C3': (6.630,19.177,-2.497)
C1': (8.493,18.670,-1.151)
C5': (5.037,19.352,-0.508)
O6: (10.430,13.014,-1.241)
O4': (7.398,19.042,-0.314)
C8: (7.829,16.315,-0.463)
C2: (11.734,16.058,-2.362)
C6: (10.480,14.229,-1.465)
C5: (9.508,15.201,-1.121)
C4: (9.772,16.510,-1.450)
P: (3.795,17.253,0.299)
C4': (6.396,19.676,-1.091)
C2': (8.155,19.082,-2.571)
O2': (8.622,20.372,-2.900)
N1: (11.568,14.749,-2.093)
N2: (12.878,16.375,-2.990)
N3: (10.861,17.024,-2.078)
N7: (8.272,15.080,-0.493)
N9: (8.690,17.226,-1.046)
O5': (4.772,17.948,-0.762)
O3': (6.082,20.034,-3.513)
Image (generated by PyMOL):