Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3TRA:A45:A21
Extra
PDB:
ATOM 1 O3' G A 44 1.278 5.828 -0.134 1.00 3.21 O
ATOM 2 P A A 45 1.544 6.589 1.271 1.00 3.60 P
ATOM 3 OP1 A A 45 0.754 5.943 2.362 1.00 3.00 O
ATOM 4 OP2 A A 45 1.091 7.976 0.957 1.00 6.05 O
ATOM 5 O5' A A 45 3.105 6.460 1.480 1.00 0.00 O
ATOM 6 C5' A A 45 3.642 5.583 2.497 1.00 2.00 C
ATOM 7 C4' A A 45 5.144 5.732 2.437 1.00 0.00 C
ATOM 8 O4' A A 45 5.505 6.501 1.301 1.00 0.00 O
ATOM 9 C3' A A 45 5.765 6.494 3.603 1.00 0.00 C
ATOM 10 O3' A A 45 5.964 5.698 4.769 1.00 0.32 O
ATOM 11 C2' A A 45 7.073 6.984 2.990 1.00 4.64 C
ATOM 12 O2' A A 45 7.972 5.875 3.080 1.00 1.66 O
ATOM 13 C1' A A 45 6.657 7.276 1.585 1.00 0.00 C
ATOM 14 N9 A A 45 6.332 8.697 1.450 1.00 0.00 N
ATOM 15 C8 A A 45 5.126 9.289 1.749 1.00 0.00 C
ATOM 16 N7 A A 45 5.101 10.581 1.540 1.00 0.00 N
ATOM 17 C5 A A 45 6.374 10.860 1.061 1.00 0.00 C
ATOM 18 C6 A A 45 6.971 12.077 0.658 1.00 1.36 C
ATOM 19 N6 A A 45 6.356 13.240 0.673 1.00 6.84 N
ATOM 20 N1 A A 45 8.267 11.968 0.239 1.00 1.62 N
ATOM 21 C2 A A 45 8.918 10.771 0.224 1.00 2.51 C
ATOM 22 N3 A A 45 8.418 9.595 0.598 1.00 2.51 N
ATOM 23 C4 A A 45 7.140 9.717 1.002 1.00 0.06 C
ATOM 24 P U A 46 5.246 6.140 6.144 1.00 0.00 P
ATOM 25 OP1 U A 46 4.945 4.944 6.997 1.00 2.78 O
ATOM 26 OP2 U A 46 3.980 6.766 5.666 1.00 1.35 O
ATOM 27 O5' U A 46 6.259 7.160 6.817 1.00 3.52 O
TER
ATOM 1 O3' A B 20 3.642 17.755 2.048 1.00 21.92 O
ATOM 2 P G B 21 3.564 17.462 0.478 1.00 19.58 P
ATOM 3 OP1 G B 21 2.309 18.027 -0.105 1.00 18.99 O
ATOM 4 OP2 G B 21 3.594 15.980 0.404 1.00 25.69 O
ATOM 5 O5' G B 21 4.854 18.170 -0.105 1.00 10.87 O
ATOM 6 C5' G B 21 4.932 19.618 -0.224 1.00 7.89 C
ATOM 7 C4' G B 21 6.235 19.849 -0.957 1.00 4.32 C
ATOM 8 O4' G B 21 7.296 19.251 -0.224 1.00 9.58 O
ATOM 9 C3' G B 21 6.319 19.210 -2.332 1.00 3.61 C
ATOM 10 O3' G B 21 5.686 19.985 -3.349 1.00 4.93 O
ATOM 11 C2' G B 21 7.827 19.074 -2.542 1.00 4.61 C
ATOM 12 O2' G B 21 8.315 20.339 -2.960 1.00 3.96 O
ATOM 13 C1' G B 21 8.285 18.761 -1.121 1.00 5.72 C
ATOM 14 N9 G B 21 8.478 17.306 -1.017 1.00 4.83 N
ATOM 15 C8 G B 21 7.658 16.374 -0.419 1.00 10.36 C
ATOM 16 N7 G B 21 8.116 15.150 -0.493 1.00 11.47 N
ATOM 17 C5 G B 21 9.322 15.280 -1.166 1.00 7.03 C
ATOM 18 C6 G B 21 10.299 14.328 -1.555 1.00 7.21 C
ATOM 19 O6 G B 21 10.293 13.104 -1.360 1.00 5.90 O
ATOM 20 N1 G B 21 11.367 14.858 -2.213 1.00 10.21 N
ATOM 21 C2 G B 21 11.493 16.184 -2.482 1.00 10.34 C
ATOM 22 N2 G B 21 12.615 16.531 -3.139 1.00 7.51 N
ATOM 23 N3 G B 21 10.613 17.122 -2.138 1.00 10.90 N
ATOM 24 C4 G B 21 9.557 16.599 -1.495 1.00 6.66 C
ATOM 25 P A B 22 5.258 19.196 -4.694 1.00 6.94 P
ATOM 26 OP1 A B 22 4.740 20.135 -5.741 1.00 6.82 O
ATOM 27 OP2 A B 22 4.215 18.265 -4.216 1.00 7.77 O
ATOM 28 O5' A B 22 6.627 18.516 -5.173 1.00 1.06 O
TER
ATOM 2 P A A 45 1.544 6.589 1.271 1.00 3.60 P
ATOM 3 OP1 A A 45 0.754 5.943 2.362 1.00 3.00 O
ATOM 4 OP2 A A 45 1.091 7.976 0.957 1.00 6.05 O
ATOM 5 O5' A A 45 3.105 6.460 1.480 1.00 0.00 O
ATOM 6 C5' A A 45 3.642 5.583 2.497 1.00 2.00 C
ATOM 7 C4' A A 45 5.144 5.732 2.437 1.00 0.00 C
ATOM 8 O4' A A 45 5.505 6.501 1.301 1.00 0.00 O
ATOM 9 C3' A A 45 5.765 6.494 3.603 1.00 0.00 C
ATOM 10 O3' A A 45 5.964 5.698 4.769 1.00 0.32 O
ATOM 11 C2' A A 45 7.073 6.984 2.990 1.00 4.64 C
ATOM 12 O2' A A 45 7.972 5.875 3.080 1.00 1.66 O
ATOM 13 C1' A A 45 6.657 7.276 1.585 1.00 0.00 C
ATOM 14 N9 A A 45 6.332 8.697 1.450 1.00 0.00 N
ATOM 15 C8 A A 45 5.126 9.289 1.749 1.00 0.00 C
ATOM 16 N7 A A 45 5.101 10.581 1.540 1.00 0.00 N
ATOM 17 C5 A A 45 6.374 10.860 1.061 1.00 0.00 C
ATOM 18 C6 A A 45 6.971 12.077 0.658 1.00 1.36 C
ATOM 19 N6 A A 45 6.356 13.240 0.673 1.00 6.84 N
ATOM 20 N1 A A 45 8.267 11.968 0.239 1.00 1.62 N
ATOM 21 C2 A A 45 8.918 10.771 0.224 1.00 2.51 C
ATOM 22 N3 A A 45 8.418 9.595 0.598 1.00 2.51 N
ATOM 23 C4 A A 45 7.140 9.717 1.002 1.00 0.06 C
ATOM 24 P U A 46 5.246 6.140 6.144 1.00 0.00 P
ATOM 25 OP1 U A 46 4.945 4.944 6.997 1.00 2.78 O
ATOM 26 OP2 U A 46 3.980 6.766 5.666 1.00 1.35 O
ATOM 27 O5' U A 46 6.259 7.160 6.817 1.00 3.52 O
TER
ATOM 1 O3' A B 20 3.642 17.755 2.048 1.00 21.92 O
ATOM 2 P G B 21 3.564 17.462 0.478 1.00 19.58 P
ATOM 3 OP1 G B 21 2.309 18.027 -0.105 1.00 18.99 O
ATOM 4 OP2 G B 21 3.594 15.980 0.404 1.00 25.69 O
ATOM 5 O5' G B 21 4.854 18.170 -0.105 1.00 10.87 O
ATOM 6 C5' G B 21 4.932 19.618 -0.224 1.00 7.89 C
ATOM 7 C4' G B 21 6.235 19.849 -0.957 1.00 4.32 C
ATOM 8 O4' G B 21 7.296 19.251 -0.224 1.00 9.58 O
ATOM 9 C3' G B 21 6.319 19.210 -2.332 1.00 3.61 C
ATOM 10 O3' G B 21 5.686 19.985 -3.349 1.00 4.93 O
ATOM 11 C2' G B 21 7.827 19.074 -2.542 1.00 4.61 C
ATOM 12 O2' G B 21 8.315 20.339 -2.960 1.00 3.96 O
ATOM 13 C1' G B 21 8.285 18.761 -1.121 1.00 5.72 C
ATOM 14 N9 G B 21 8.478 17.306 -1.017 1.00 4.83 N
ATOM 15 C8 G B 21 7.658 16.374 -0.419 1.00 10.36 C
ATOM 16 N7 G B 21 8.116 15.150 -0.493 1.00 11.47 N
ATOM 17 C5 G B 21 9.322 15.280 -1.166 1.00 7.03 C
ATOM 18 C6 G B 21 10.299 14.328 -1.555 1.00 7.21 C
ATOM 19 O6 G B 21 10.293 13.104 -1.360 1.00 5.90 O
ATOM 20 N1 G B 21 11.367 14.858 -2.213 1.00 10.21 N
ATOM 21 C2 G B 21 11.493 16.184 -2.482 1.00 10.34 C
ATOM 22 N2 G B 21 12.615 16.531 -3.139 1.00 7.51 N
ATOM 23 N3 G B 21 10.613 17.122 -2.138 1.00 10.90 N
ATOM 24 C4 G B 21 9.557 16.599 -1.495 1.00 6.66 C
ATOM 25 P A B 22 5.258 19.196 -4.694 1.00 6.94 P
ATOM 26 OP1 A B 22 4.740 20.135 -5.741 1.00 6.82 O
ATOM 27 OP2 A B 22 4.215 18.265 -4.216 1.00 7.77 O
ATOM 28 O5' A B 22 6.627 18.516 -5.173 1.00 1.06 O
TER
Atoms:
OP1: (0.754,5.943,2.362)
OP2: (1.091,7.976,0.957)
C3': (5.765,6.494,3.603)
C1': (6.657,7.276,1.585)
C5': (3.642,5.583,2.497)
O4': (5.505,6.501,1.301)
C8: (5.126,9.289,1.749)
O2': (7.972,5.875,3.080)
C6: (6.971,12.077,0.658)
C5: (6.374,10.860,1.061)
C4: (7.140,9.717,1.002)
P: (1.544,6.589,1.271)
C4': (5.144,5.732,2.437)
C2': (7.073,6.984,2.990)
C2: (8.918,10.771,0.224)
N1: (8.267,11.968,0.239)
N3: (8.418,9.595,0.598)
N6: (6.356,13.240,0.673)
N7: (5.101,10.581,1.540)
N9: (6.332,8.697,1.450)
O5': (3.105,6.460,1.480)
O3': (5.964,5.698,4.769)
OP2: (1.091,7.976,0.957)
C3': (5.765,6.494,3.603)
C1': (6.657,7.276,1.585)
C5': (3.642,5.583,2.497)
O4': (5.505,6.501,1.301)
C8: (5.126,9.289,1.749)
O2': (7.972,5.875,3.080)
C6: (6.971,12.077,0.658)
C5: (6.374,10.860,1.061)
C4: (7.140,9.717,1.002)
P: (1.544,6.589,1.271)
C4': (5.144,5.732,2.437)
C2': (7.073,6.984,2.990)
C2: (8.918,10.771,0.224)
N1: (8.267,11.968,0.239)
N3: (8.418,9.595,0.598)
N6: (6.356,13.240,0.673)
N7: (5.101,10.581,1.540)
N9: (6.332,8.697,1.450)
O5': (3.105,6.460,1.480)
O3': (5.964,5.698,4.769)
OP1: (2.309,18.027,-0.105)
OP2: (3.594,15.980,0.404)
C3': (6.319,19.210,-2.332)
C1': (8.285,18.761,-1.121)
C5': (4.932,19.618,-0.224)
O6: (10.293,13.104,-1.360)
O4': (7.296,19.251,-0.224)
C8: (7.658,16.374,-0.419)
C2: (11.493,16.184,-2.482)
C6: (10.299,14.328,-1.555)
C5: (9.322,15.280,-1.166)
C4: (9.557,16.599,-1.495)
P: (3.564,17.462,0.478)
C4': (6.235,19.849,-0.957)
C2': (7.827,19.074,-2.542)
O2': (8.315,20.339,-2.960)
N1: (11.367,14.858,-2.213)
N2: (12.615,16.531,-3.139)
N3: (10.613,17.122,-2.138)
N7: (8.116,15.150,-0.493)
N9: (8.478,17.306,-1.017)
O5': (4.854,18.170,-0.105)
O3': (5.686,19.985,-3.349)
OP2: (3.594,15.980,0.404)
C3': (6.319,19.210,-2.332)
C1': (8.285,18.761,-1.121)
C5': (4.932,19.618,-0.224)
O6: (10.293,13.104,-1.360)
O4': (7.296,19.251,-0.224)
C8: (7.658,16.374,-0.419)
C2: (11.493,16.184,-2.482)
C6: (10.299,14.328,-1.555)
C5: (9.322,15.280,-1.166)
C4: (9.557,16.599,-1.495)
P: (3.564,17.462,0.478)
C4': (6.235,19.849,-0.957)
C2': (7.827,19.074,-2.542)
O2': (8.315,20.339,-2.960)
N1: (11.367,14.858,-2.213)
N2: (12.615,16.531,-3.139)
N3: (10.613,17.122,-2.138)
N7: (8.116,15.150,-0.493)
N9: (8.478,17.306,-1.017)
O5': (4.854,18.170,-0.105)
O3': (5.686,19.985,-3.349)
Image (generated by PyMOL):