Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2622:21086
Extra
PDB:
ATOM 1 O3' A A 621 -59.092 12.225 97.481 1.00 65.53 O
ATOM 2 P A A 622 -57.519 12.003 97.257 1.00 64.46 P
ATOM 3 OP1 A A 622 -57.347 11.012 96.180 1.00 64.38 O
ATOM 4 OP2 A A 622 -56.943 11.717 98.586 1.00 64.79 O
ATOM 5 O5' A A 622 -57.036 13.442 96.777 1.00 63.65 O
ATOM 6 C5' A A 622 -55.897 13.604 95.953 1.00 62.91 C
ATOM 7 C4' A A 622 -54.695 14.140 96.717 1.00 62.55 C
ATOM 8 O4' A A 622 -54.727 15.592 96.816 1.00 62.17 O
ATOM 9 C3' A A 622 -54.482 13.619 98.136 1.00 63.11 C
ATOM 10 O3' A A 622 -53.121 13.308 98.261 1.00 62.80 O
ATOM 11 C2' A A 622 -54.775 14.844 99.001 1.00 63.16 C
ATOM 12 O2' A A 622 -54.103 14.872 100.240 1.00 63.38 O
ATOM 13 C1' A A 622 -54.280 15.946 98.100 1.00 62.35 C
ATOM 14 N9 A A 622 -54.782 17.269 98.441 1.00 62.29 N
ATOM 15 C8 A A 622 -54.004 18.333 98.826 1.00 61.89 C
ATOM 16 N7 A A 622 -54.685 19.417 99.096 1.00 61.98 N
ATOM 17 C5 A A 622 -56.008 19.045 98.867 1.00 62.48 C
ATOM 18 C6 A A 622 -57.211 19.757 98.966 1.00 62.83 C
ATOM 19 N6 A A 622 -57.312 21.023 99.335 1.00 62.75 N
ATOM 20 N1 A A 622 -58.341 19.092 98.669 1.00 63.33 N
ATOM 21 C2 A A 622 -58.250 17.796 98.303 1.00 63.46 C
ATOM 22 N3 A A 622 -57.179 17.015 98.170 1.00 63.17 N
ATOM 23 C4 A A 622 -56.079 17.713 98.474 1.00 62.68 C
ATOM 24 P G A 623 -52.628 11.803 98.135 1.00 61.71 P
ATOM 25 OP1 G A 623 -51.143 11.839 97.957 1.00 61.18 O
ATOM 26 OP2 G A 623 -53.442 11.151 97.105 1.00 61.84 O
ATOM 27 O5' G A 623 -52.985 11.234 99.576 1.00 62.55 O
TER
ATOM 1 O3' U B1085 -63.991 28.340 100.152 1.00 63.30 O
ATOM 2 P U B1086 -63.638 28.289 98.603 1.00 65.34 P
ATOM 3 OP1 U B1086 -63.340 29.694 98.191 1.00 64.98 O
ATOM 4 OP2 U B1086 -64.747 27.558 97.920 1.00 65.75 O
ATOM 5 O5' U B1086 -62.327 27.397 98.575 1.00 64.74 O
ATOM 6 C5' U B1086 -61.626 27.124 99.771 1.00 64.84 C
ATOM 7 C4' U B1086 -61.044 25.723 99.811 1.00 64.71 C
ATOM 8 O4' U B1086 -62.017 24.776 100.331 1.00 65.48 O
ATOM 9 C3' U B1086 -60.610 25.086 98.499 1.00 64.12 C
ATOM 10 O3' U B1086 -59.395 25.616 97.984 1.00 63.34 O
ATOM 11 C2' U B1086 -60.490 23.627 98.917 1.00 64.41 C
ATOM 12 O2' U B1086 -59.283 23.411 99.634 1.00 64.15 O
ATOM 13 C1' U B1086 -61.664 23.483 99.898 1.00 65.32 C
ATOM 14 N1 U B1086 -62.812 22.859 99.263 1.00 65.74 N
ATOM 15 C2 U B1086 -62.748 21.499 99.182 1.00 65.90 C
ATOM 16 O2 U B1086 -61.856 20.847 99.639 1.00 65.76 O
ATOM 17 N3 U B1086 -63.794 20.906 98.566 1.00 66.31 N
ATOM 18 C4 U B1086 -64.895 21.522 98.021 1.00 66.58 C
ATOM 19 O4 U B1086 -65.740 20.820 97.508 1.00 66.98 O
ATOM 20 C5 U B1086 -64.898 22.946 98.130 1.00 66.40 C
ATOM 21 C6 U B1086 -63.856 23.563 98.728 1.00 65.97 C
ATOM 22 P C B1087 -59.140 25.721 96.391 1.00 64.11 P
ATOM 23 OP1 C B1087 -57.902 26.487 96.218 1.00 63.44 O
ATOM 24 OP2 C B1087 -60.363 26.242 95.778 1.00 64.43 O
ATOM 25 O5' C B1087 -58.927 24.209 95.937 1.00 64.07 O
TER
ATOM 2 P A A 622 -57.519 12.003 97.257 1.00 64.46 P
ATOM 3 OP1 A A 622 -57.347 11.012 96.180 1.00 64.38 O
ATOM 4 OP2 A A 622 -56.943 11.717 98.586 1.00 64.79 O
ATOM 5 O5' A A 622 -57.036 13.442 96.777 1.00 63.65 O
ATOM 6 C5' A A 622 -55.897 13.604 95.953 1.00 62.91 C
ATOM 7 C4' A A 622 -54.695 14.140 96.717 1.00 62.55 C
ATOM 8 O4' A A 622 -54.727 15.592 96.816 1.00 62.17 O
ATOM 9 C3' A A 622 -54.482 13.619 98.136 1.00 63.11 C
ATOM 10 O3' A A 622 -53.121 13.308 98.261 1.00 62.80 O
ATOM 11 C2' A A 622 -54.775 14.844 99.001 1.00 63.16 C
ATOM 12 O2' A A 622 -54.103 14.872 100.240 1.00 63.38 O
ATOM 13 C1' A A 622 -54.280 15.946 98.100 1.00 62.35 C
ATOM 14 N9 A A 622 -54.782 17.269 98.441 1.00 62.29 N
ATOM 15 C8 A A 622 -54.004 18.333 98.826 1.00 61.89 C
ATOM 16 N7 A A 622 -54.685 19.417 99.096 1.00 61.98 N
ATOM 17 C5 A A 622 -56.008 19.045 98.867 1.00 62.48 C
ATOM 18 C6 A A 622 -57.211 19.757 98.966 1.00 62.83 C
ATOM 19 N6 A A 622 -57.312 21.023 99.335 1.00 62.75 N
ATOM 20 N1 A A 622 -58.341 19.092 98.669 1.00 63.33 N
ATOM 21 C2 A A 622 -58.250 17.796 98.303 1.00 63.46 C
ATOM 22 N3 A A 622 -57.179 17.015 98.170 1.00 63.17 N
ATOM 23 C4 A A 622 -56.079 17.713 98.474 1.00 62.68 C
ATOM 24 P G A 623 -52.628 11.803 98.135 1.00 61.71 P
ATOM 25 OP1 G A 623 -51.143 11.839 97.957 1.00 61.18 O
ATOM 26 OP2 G A 623 -53.442 11.151 97.105 1.00 61.84 O
ATOM 27 O5' G A 623 -52.985 11.234 99.576 1.00 62.55 O
TER
ATOM 1 O3' U B1085 -63.991 28.340 100.152 1.00 63.30 O
ATOM 2 P U B1086 -63.638 28.289 98.603 1.00 65.34 P
ATOM 3 OP1 U B1086 -63.340 29.694 98.191 1.00 64.98 O
ATOM 4 OP2 U B1086 -64.747 27.558 97.920 1.00 65.75 O
ATOM 5 O5' U B1086 -62.327 27.397 98.575 1.00 64.74 O
ATOM 6 C5' U B1086 -61.626 27.124 99.771 1.00 64.84 C
ATOM 7 C4' U B1086 -61.044 25.723 99.811 1.00 64.71 C
ATOM 8 O4' U B1086 -62.017 24.776 100.331 1.00 65.48 O
ATOM 9 C3' U B1086 -60.610 25.086 98.499 1.00 64.12 C
ATOM 10 O3' U B1086 -59.395 25.616 97.984 1.00 63.34 O
ATOM 11 C2' U B1086 -60.490 23.627 98.917 1.00 64.41 C
ATOM 12 O2' U B1086 -59.283 23.411 99.634 1.00 64.15 O
ATOM 13 C1' U B1086 -61.664 23.483 99.898 1.00 65.32 C
ATOM 14 N1 U B1086 -62.812 22.859 99.263 1.00 65.74 N
ATOM 15 C2 U B1086 -62.748 21.499 99.182 1.00 65.90 C
ATOM 16 O2 U B1086 -61.856 20.847 99.639 1.00 65.76 O
ATOM 17 N3 U B1086 -63.794 20.906 98.566 1.00 66.31 N
ATOM 18 C4 U B1086 -64.895 21.522 98.021 1.00 66.58 C
ATOM 19 O4 U B1086 -65.740 20.820 97.508 1.00 66.98 O
ATOM 20 C5 U B1086 -64.898 22.946 98.130 1.00 66.40 C
ATOM 21 C6 U B1086 -63.856 23.563 98.728 1.00 65.97 C
ATOM 22 P C B1087 -59.140 25.721 96.391 1.00 64.11 P
ATOM 23 OP1 C B1087 -57.902 26.487 96.218 1.00 63.44 O
ATOM 24 OP2 C B1087 -60.363 26.242 95.778 1.00 64.43 O
ATOM 25 O5' C B1087 -58.927 24.209 95.937 1.00 64.07 O
TER
Atoms:
OP1: (-57.347,11.012,96.180)
OP2: (-56.943,11.717,98.586)
C3': (-54.482,13.619,98.136)
C1': (-54.280,15.946,98.100)
C5': (-55.897,13.604,95.953)
O4': (-54.727,15.592,96.816)
C8: (-54.004,18.333,98.826)
O2': (-54.103,14.872,100.240)
C6: (-57.211,19.757,98.966)
C5: (-56.008,19.045,98.867)
C4: (-56.079,17.713,98.474)
P: (-57.519,12.003,97.257)
C4': (-54.695,14.140,96.717)
C2': (-54.775,14.844,99.001)
C2: (-58.250,17.796,98.303)
N1: (-58.341,19.092,98.669)
N3: (-57.179,17.015,98.170)
N6: (-57.312,21.023,99.335)
N7: (-54.685,19.417,99.096)
N9: (-54.782,17.269,98.441)
O5': (-57.036,13.442,96.777)
O3': (-53.121,13.308,98.261)
OP2: (-56.943,11.717,98.586)
C3': (-54.482,13.619,98.136)
C1': (-54.280,15.946,98.100)
C5': (-55.897,13.604,95.953)
O4': (-54.727,15.592,96.816)
C8: (-54.004,18.333,98.826)
O2': (-54.103,14.872,100.240)
C6: (-57.211,19.757,98.966)
C5: (-56.008,19.045,98.867)
C4: (-56.079,17.713,98.474)
P: (-57.519,12.003,97.257)
C4': (-54.695,14.140,96.717)
C2': (-54.775,14.844,99.001)
C2: (-58.250,17.796,98.303)
N1: (-58.341,19.092,98.669)
N3: (-57.179,17.015,98.170)
N6: (-57.312,21.023,99.335)
N7: (-54.685,19.417,99.096)
N9: (-54.782,17.269,98.441)
O5': (-57.036,13.442,96.777)
O3': (-53.121,13.308,98.261)
C4: (-64.895,21.522,98.021)
N3: (-63.794,20.906,98.566)
OP1: (-63.340,29.694,98.191)
OP2: (-64.747,27.558,97.920)
C2: (-62.748,21.499,99.182)
C1': (-61.664,23.483,99.898)
C3': (-60.610,25.086,98.499)
O5': (-62.327,27.397,98.575)
O4': (-62.017,24.776,100.331)
C5': (-61.626,27.124,99.771)
P: (-63.638,28.289,98.603)
C4': (-61.044,25.723,99.811)
C2': (-60.490,23.627,98.917)
O2': (-59.283,23.411,99.634)
N1: (-62.812,22.859,99.263)
O4: (-65.740,20.820,97.508)
O2: (-61.856,20.847,99.639)
C6: (-63.856,23.563,98.728)
C5: (-64.898,22.946,98.130)
O3': (-59.395,25.616,97.984)
N3: (-63.794,20.906,98.566)
OP1: (-63.340,29.694,98.191)
OP2: (-64.747,27.558,97.920)
C2: (-62.748,21.499,99.182)
C1': (-61.664,23.483,99.898)
C3': (-60.610,25.086,98.499)
O5': (-62.327,27.397,98.575)
O4': (-62.017,24.776,100.331)
C5': (-61.626,27.124,99.771)
P: (-63.638,28.289,98.603)
C4': (-61.044,25.723,99.811)
C2': (-60.490,23.627,98.917)
O2': (-59.283,23.411,99.634)
N1: (-62.812,22.859,99.263)
O4: (-65.740,20.820,97.508)
O2: (-61.856,20.847,99.639)
C6: (-63.856,23.563,98.728)
C5: (-64.898,22.946,98.130)
O3': (-59.395,25.616,97.984)
Image (generated by PyMOL):