Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A304:A325
Extra
PDB:
ATOM 1 O3' G A 303 7.993 151.254 48.682 1.00 59.69 O
ATOM 2 P A A 304 7.144 150.174 47.858 1.00 59.90 P
ATOM 3 OP1 A A 304 6.244 151.004 47.051 1.00 61.56 O
ATOM 4 OP2 A A 304 6.568 149.084 48.710 1.00 60.18 O
ATOM 5 O5' A A 304 8.192 149.564 46.840 1.00 57.99 O
ATOM 6 C5' A A 304 8.851 150.395 45.881 1.00 57.15 C
ATOM 7 C4' A A 304 10.122 149.724 45.473 1.00 57.00 C
ATOM 8 O4' A A 304 10.932 149.591 46.675 1.00 57.16 O
ATOM 9 C3' A A 304 9.927 148.299 44.957 1.00 56.50 C
ATOM 10 O3' A A 304 9.756 148.307 43.519 1.00 55.77 O
ATOM 11 C2' A A 304 11.261 147.658 45.331 1.00 56.03 C
ATOM 12 O2' A A 304 12.256 148.030 44.398 1.00 56.06 O
ATOM 13 C1' A A 304 11.577 148.335 46.672 1.00 55.70 C
ATOM 14 N9 A A 304 11.173 147.575 47.862 1.00 53.91 N
ATOM 15 C8 A A 304 9.989 147.583 48.562 1.00 53.24 C
ATOM 16 N7 A A 304 9.976 146.764 49.589 1.00 52.52 N
ATOM 17 C5 A A 304 11.232 146.176 49.558 1.00 51.76 C
ATOM 18 C6 A A 304 11.855 145.221 50.377 1.00 51.31 C
ATOM 19 N6 A A 304 11.283 144.672 51.447 1.00 50.19 N
ATOM 20 N1 A A 304 13.117 144.854 50.063 1.00 50.55 N
ATOM 21 C2 A A 304 13.708 145.425 49.014 1.00 50.08 C
ATOM 22 N3 A A 304 13.236 146.336 48.182 1.00 49.78 N
ATOM 23 C4 A A 304 11.977 146.670 48.506 1.00 51.95 C
ATOM 24 P A A 305 8.439 147.670 42.811 1.00 54.96 P
ATOM 25 OP1 A A 305 8.561 148.077 41.387 1.00 54.72 O
ATOM 26 OP2 A A 305 7.209 148.005 43.570 1.00 54.23 O
ATOM 27 O5' A A 305 8.642 146.088 42.791 1.00 53.01 O
TER
ATOM 1 O3' G B 324 16.492 145.262 46.912 1.00 50.69 O
ATOM 2 P A B 325 17.403 144.061 47.461 1.00 48.45 P
ATOM 3 OP1 A B 325 17.810 144.472 48.810 1.00 49.26 O
ATOM 4 OP2 A B 325 18.440 143.663 46.468 1.00 47.49 O
ATOM 5 O5' A B 325 16.369 142.873 47.654 1.00 48.70 O
ATOM 6 C5' A B 325 16.053 141.961 46.590 1.00 48.82 C
ATOM 7 C4' A B 325 15.634 140.645 47.193 1.00 49.82 C
ATOM 8 O4' A B 325 14.584 140.909 48.163 1.00 50.14 O
ATOM 9 C3' A B 325 15.099 139.537 46.291 1.00 50.67 C
ATOM 10 O3' A B 325 15.495 138.280 46.838 1.00 51.96 O
ATOM 11 C2' A B 325 13.589 139.654 46.477 1.00 49.82 C
ATOM 12 O2' A B 325 12.920 138.428 46.288 1.00 51.83 O
ATOM 13 C1' A B 325 13.505 140.030 47.949 1.00 48.99 C
ATOM 14 N9 A B 325 12.273 140.709 48.342 1.00 48.20 N
ATOM 15 C8 A B 325 11.415 140.335 49.339 1.00 48.17 C
ATOM 16 N7 A B 325 10.397 141.143 49.494 1.00 48.46 N
ATOM 17 C5 A B 325 10.602 142.123 48.538 1.00 49.21 C
ATOM 18 C6 A B 325 9.879 143.277 48.195 1.00 49.50 C
ATOM 19 N6 A B 325 8.780 143.683 48.836 1.00 49.01 N
ATOM 20 N1 A B 325 10.336 144.017 47.164 1.00 49.31 N
ATOM 21 C2 A B 325 11.455 143.627 46.545 1.00 49.39 C
ATOM 22 N3 A B 325 12.231 142.581 46.790 1.00 49.03 N
ATOM 23 C4 A B 325 11.744 141.859 47.808 1.00 48.73 C
ATOM 24 P C B 326 16.546 137.358 46.051 1.00 53.27 P
ATOM 25 OP1 C B 326 17.358 136.630 47.055 1.00 53.73 O
ATOM 26 OP2 C B 326 17.227 138.158 45.010 1.00 52.57 O
ATOM 27 O5' C B 326 15.668 136.235 45.343 1.00 54.23 O
TER
ATOM 2 P A A 304 7.144 150.174 47.858 1.00 59.90 P
ATOM 3 OP1 A A 304 6.244 151.004 47.051 1.00 61.56 O
ATOM 4 OP2 A A 304 6.568 149.084 48.710 1.00 60.18 O
ATOM 5 O5' A A 304 8.192 149.564 46.840 1.00 57.99 O
ATOM 6 C5' A A 304 8.851 150.395 45.881 1.00 57.15 C
ATOM 7 C4' A A 304 10.122 149.724 45.473 1.00 57.00 C
ATOM 8 O4' A A 304 10.932 149.591 46.675 1.00 57.16 O
ATOM 9 C3' A A 304 9.927 148.299 44.957 1.00 56.50 C
ATOM 10 O3' A A 304 9.756 148.307 43.519 1.00 55.77 O
ATOM 11 C2' A A 304 11.261 147.658 45.331 1.00 56.03 C
ATOM 12 O2' A A 304 12.256 148.030 44.398 1.00 56.06 O
ATOM 13 C1' A A 304 11.577 148.335 46.672 1.00 55.70 C
ATOM 14 N9 A A 304 11.173 147.575 47.862 1.00 53.91 N
ATOM 15 C8 A A 304 9.989 147.583 48.562 1.00 53.24 C
ATOM 16 N7 A A 304 9.976 146.764 49.589 1.00 52.52 N
ATOM 17 C5 A A 304 11.232 146.176 49.558 1.00 51.76 C
ATOM 18 C6 A A 304 11.855 145.221 50.377 1.00 51.31 C
ATOM 19 N6 A A 304 11.283 144.672 51.447 1.00 50.19 N
ATOM 20 N1 A A 304 13.117 144.854 50.063 1.00 50.55 N
ATOM 21 C2 A A 304 13.708 145.425 49.014 1.00 50.08 C
ATOM 22 N3 A A 304 13.236 146.336 48.182 1.00 49.78 N
ATOM 23 C4 A A 304 11.977 146.670 48.506 1.00 51.95 C
ATOM 24 P A A 305 8.439 147.670 42.811 1.00 54.96 P
ATOM 25 OP1 A A 305 8.561 148.077 41.387 1.00 54.72 O
ATOM 26 OP2 A A 305 7.209 148.005 43.570 1.00 54.23 O
ATOM 27 O5' A A 305 8.642 146.088 42.791 1.00 53.01 O
TER
ATOM 1 O3' G B 324 16.492 145.262 46.912 1.00 50.69 O
ATOM 2 P A B 325 17.403 144.061 47.461 1.00 48.45 P
ATOM 3 OP1 A B 325 17.810 144.472 48.810 1.00 49.26 O
ATOM 4 OP2 A B 325 18.440 143.663 46.468 1.00 47.49 O
ATOM 5 O5' A B 325 16.369 142.873 47.654 1.00 48.70 O
ATOM 6 C5' A B 325 16.053 141.961 46.590 1.00 48.82 C
ATOM 7 C4' A B 325 15.634 140.645 47.193 1.00 49.82 C
ATOM 8 O4' A B 325 14.584 140.909 48.163 1.00 50.14 O
ATOM 9 C3' A B 325 15.099 139.537 46.291 1.00 50.67 C
ATOM 10 O3' A B 325 15.495 138.280 46.838 1.00 51.96 O
ATOM 11 C2' A B 325 13.589 139.654 46.477 1.00 49.82 C
ATOM 12 O2' A B 325 12.920 138.428 46.288 1.00 51.83 O
ATOM 13 C1' A B 325 13.505 140.030 47.949 1.00 48.99 C
ATOM 14 N9 A B 325 12.273 140.709 48.342 1.00 48.20 N
ATOM 15 C8 A B 325 11.415 140.335 49.339 1.00 48.17 C
ATOM 16 N7 A B 325 10.397 141.143 49.494 1.00 48.46 N
ATOM 17 C5 A B 325 10.602 142.123 48.538 1.00 49.21 C
ATOM 18 C6 A B 325 9.879 143.277 48.195 1.00 49.50 C
ATOM 19 N6 A B 325 8.780 143.683 48.836 1.00 49.01 N
ATOM 20 N1 A B 325 10.336 144.017 47.164 1.00 49.31 N
ATOM 21 C2 A B 325 11.455 143.627 46.545 1.00 49.39 C
ATOM 22 N3 A B 325 12.231 142.581 46.790 1.00 49.03 N
ATOM 23 C4 A B 325 11.744 141.859 47.808 1.00 48.73 C
ATOM 24 P C B 326 16.546 137.358 46.051 1.00 53.27 P
ATOM 25 OP1 C B 326 17.358 136.630 47.055 1.00 53.73 O
ATOM 26 OP2 C B 326 17.227 138.158 45.010 1.00 52.57 O
ATOM 27 O5' C B 326 15.668 136.235 45.343 1.00 54.23 O
TER
Atoms:
OP1: (6.244,151.004,47.051)
OP2: (6.568,149.084,48.710)
C3': (9.927,148.299,44.957)
C1': (11.577,148.335,46.672)
C5': (8.851,150.395,45.881)
O4': (10.932,149.591,46.675)
C8: (9.989,147.583,48.562)
O2': (12.256,148.030,44.398)
C6: (11.855,145.221,50.377)
C5: (11.232,146.176,49.558)
C4: (11.977,146.670,48.506)
P: (7.144,150.174,47.858)
C4': (10.122,149.724,45.473)
C2': (11.261,147.658,45.331)
C2: (13.708,145.425,49.014)
N1: (13.117,144.854,50.063)
N3: (13.236,146.336,48.182)
N6: (11.283,144.672,51.447)
N7: (9.976,146.764,49.589)
N9: (11.173,147.575,47.862)
O5': (8.192,149.564,46.840)
O3': (9.756,148.307,43.519)
OP2: (6.568,149.084,48.710)
C3': (9.927,148.299,44.957)
C1': (11.577,148.335,46.672)
C5': (8.851,150.395,45.881)
O4': (10.932,149.591,46.675)
C8: (9.989,147.583,48.562)
O2': (12.256,148.030,44.398)
C6: (11.855,145.221,50.377)
C5: (11.232,146.176,49.558)
C4: (11.977,146.670,48.506)
P: (7.144,150.174,47.858)
C4': (10.122,149.724,45.473)
C2': (11.261,147.658,45.331)
C2: (13.708,145.425,49.014)
N1: (13.117,144.854,50.063)
N3: (13.236,146.336,48.182)
N6: (11.283,144.672,51.447)
N7: (9.976,146.764,49.589)
N9: (11.173,147.575,47.862)
O5': (8.192,149.564,46.840)
O3': (9.756,148.307,43.519)
OP1: (17.810,144.472,48.810)
OP2: (18.440,143.663,46.468)
C3': (15.099,139.537,46.291)
C1': (13.505,140.030,47.949)
C5': (16.053,141.961,46.590)
O4': (14.584,140.909,48.163)
C8: (11.415,140.335,49.339)
O2': (12.920,138.428,46.288)
C6: (9.879,143.277,48.195)
C5: (10.602,142.123,48.538)
C4: (11.744,141.859,47.808)
P: (17.403,144.061,47.461)
C4': (15.634,140.645,47.193)
C2': (13.589,139.654,46.477)
C2: (11.455,143.627,46.545)
N1: (10.336,144.017,47.164)
N3: (12.231,142.581,46.790)
N6: (8.780,143.683,48.836)
N7: (10.397,141.143,49.494)
N9: (12.273,140.709,48.342)
O5': (16.369,142.873,47.654)
O3': (15.495,138.280,46.838)
OP2: (18.440,143.663,46.468)
C3': (15.099,139.537,46.291)
C1': (13.505,140.030,47.949)
C5': (16.053,141.961,46.590)
O4': (14.584,140.909,48.163)
C8: (11.415,140.335,49.339)
O2': (12.920,138.428,46.288)
C6: (9.879,143.277,48.195)
C5: (10.602,142.123,48.538)
C4: (11.744,141.859,47.808)
P: (17.403,144.061,47.461)
C4': (15.634,140.645,47.193)
C2': (13.589,139.654,46.477)
C2: (11.455,143.627,46.545)
N1: (10.336,144.017,47.164)
N3: (12.231,142.581,46.790)
N6: (8.780,143.683,48.836)
N7: (10.397,141.143,49.494)
N9: (12.273,140.709,48.342)
O5': (16.369,142.873,47.654)
O3': (15.495,138.280,46.838)
Image (generated by PyMOL):