Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3B5S:C9:B21
Extra
PDB:
ATOM 1 O3' C A 8 21.415 13.738 47.929 1.00 66.69 O
ATOM 2 P A A 9 21.492 15.331 47.869 1.00 71.65 P
ATOM 3 OP1 A A 9 20.217 15.676 48.579 1.00 68.74 O
ATOM 4 OP2 A A 9 21.751 15.864 46.502 1.00 63.59 O
ATOM 5 O5' A A 9 22.719 15.680 48.809 1.00 65.16 O
ATOM 6 C5' A A 9 22.846 15.104 50.092 1.00 62.62 C
ATOM 7 C4' A A 9 24.196 15.451 50.631 1.00 66.21 C
ATOM 8 O4' A A 9 25.174 14.912 49.732 1.00 60.81 O
ATOM 9 C3' A A 9 24.497 16.939 50.618 1.00 60.86 C
ATOM 10 O3' A A 9 24.029 17.561 51.809 1.00 64.41 O
ATOM 11 C2' A A 9 26.011 16.950 50.575 1.00 60.60 C
ATOM 12 O2' A A 9 26.568 16.651 51.829 1.00 60.38 O
ATOM 13 C1' A A 9 26.277 15.776 49.645 1.00 59.65 C
ATOM 14 N9 A A 9 26.485 16.119 48.247 1.00 57.75 N
ATOM 15 C8 A A 9 25.678 15.890 47.167 1.00 60.05 C
ATOM 16 N7 A A 9 26.217 16.237 46.033 1.00 57.92 N
ATOM 17 C5 A A 9 27.452 16.756 46.397 1.00 55.91 C
ATOM 18 C6 A A 9 28.508 17.300 45.658 1.00 55.36 C
ATOM 19 N6 A A 9 28.489 17.438 44.333 1.00 57.33 N
ATOM 20 N1 A A 9 29.599 17.706 46.329 1.00 56.89 N
ATOM 21 C2 A A 9 29.606 17.596 47.651 1.00 57.33 C
ATOM 22 N3 A A 9 28.678 17.127 48.454 1.00 56.72 N
ATOM 23 C4 A A 9 27.615 16.707 47.756 1.00 56.09 C
ATOM 24 P U A 10 23.344 19.000 51.744 1.00 61.61 P
ATOM 25 OP1 U A 10 23.080 19.321 53.162 1.00 66.64 O
ATOM 26 OP2 U A 10 22.245 19.030 50.748 1.00 60.27 O
ATOM 27 O5' U A 10 24.491 19.961 51.222 1.00 60.01 O
TER
ATOM 1 O3' A B 20 29.185 16.767 38.303 1.00 71.68 O
ATOM 2 P A B 21 30.461 15.923 38.795 1.00 75.21 P
ATOM 3 OP1 A B 21 30.878 15.066 37.659 1.00 79.94 O
ATOM 4 OP2 A B 21 30.200 15.309 40.116 1.00 70.76 O
ATOM 5 O5' A B 21 31.577 17.035 38.916 1.00 73.09 O
ATOM 6 C5' A B 21 31.971 17.769 37.765 1.00 70.33 C
ATOM 7 C4' A B 21 32.904 18.869 38.170 1.00 71.48 C
ATOM 8 O4' A B 21 32.178 19.814 38.993 1.00 73.77 O
ATOM 9 C3' A B 21 34.059 18.423 39.049 1.00 73.03 C
ATOM 10 O3' A B 21 35.129 17.889 38.277 1.00 72.93 O
ATOM 11 C2' A B 21 34.415 19.713 39.777 1.00 73.62 C
ATOM 12 O2' A B 21 35.182 20.631 39.032 1.00 73.82 O
ATOM 13 C1' A B 21 33.029 20.307 40.015 1.00 73.27 C
ATOM 14 N9 A B 21 32.507 19.897 41.328 1.00 70.03 N
ATOM 15 C8 A B 21 31.570 18.943 41.627 1.00 67.98 C
ATOM 16 N7 A B 21 31.362 18.794 42.914 1.00 67.18 N
ATOM 17 C5 A B 21 32.208 19.725 43.501 1.00 65.37 C
ATOM 18 C6 A B 21 32.455 20.069 44.827 1.00 63.90 C
ATOM 19 N6 A B 21 31.833 19.508 45.861 1.00 63.49 N
ATOM 20 N1 A B 21 33.373 21.028 45.065 1.00 64.37 N
ATOM 21 C2 A B 21 33.980 21.608 44.040 1.00 66.57 C
ATOM 22 N3 A B 21 33.829 21.388 42.754 1.00 67.83 N
ATOM 23 C4 A B 21 32.917 20.415 42.538 1.00 65.40 C
ATOM 24 P A B 22 36.203 16.895 38.952 1.00 74.71 P
ATOM 25 OP1 A B 22 37.282 16.622 37.983 1.00 82.56 O
ATOM 26 OP2 A B 22 35.477 15.762 39.580 1.00 76.00 O
ATOM 27 O5' A B 22 36.864 17.774 40.087 1.00 72.36 O
TER
ATOM 2 P A A 9 21.492 15.331 47.869 1.00 71.65 P
ATOM 3 OP1 A A 9 20.217 15.676 48.579 1.00 68.74 O
ATOM 4 OP2 A A 9 21.751 15.864 46.502 1.00 63.59 O
ATOM 5 O5' A A 9 22.719 15.680 48.809 1.00 65.16 O
ATOM 6 C5' A A 9 22.846 15.104 50.092 1.00 62.62 C
ATOM 7 C4' A A 9 24.196 15.451 50.631 1.00 66.21 C
ATOM 8 O4' A A 9 25.174 14.912 49.732 1.00 60.81 O
ATOM 9 C3' A A 9 24.497 16.939 50.618 1.00 60.86 C
ATOM 10 O3' A A 9 24.029 17.561 51.809 1.00 64.41 O
ATOM 11 C2' A A 9 26.011 16.950 50.575 1.00 60.60 C
ATOM 12 O2' A A 9 26.568 16.651 51.829 1.00 60.38 O
ATOM 13 C1' A A 9 26.277 15.776 49.645 1.00 59.65 C
ATOM 14 N9 A A 9 26.485 16.119 48.247 1.00 57.75 N
ATOM 15 C8 A A 9 25.678 15.890 47.167 1.00 60.05 C
ATOM 16 N7 A A 9 26.217 16.237 46.033 1.00 57.92 N
ATOM 17 C5 A A 9 27.452 16.756 46.397 1.00 55.91 C
ATOM 18 C6 A A 9 28.508 17.300 45.658 1.00 55.36 C
ATOM 19 N6 A A 9 28.489 17.438 44.333 1.00 57.33 N
ATOM 20 N1 A A 9 29.599 17.706 46.329 1.00 56.89 N
ATOM 21 C2 A A 9 29.606 17.596 47.651 1.00 57.33 C
ATOM 22 N3 A A 9 28.678 17.127 48.454 1.00 56.72 N
ATOM 23 C4 A A 9 27.615 16.707 47.756 1.00 56.09 C
ATOM 24 P U A 10 23.344 19.000 51.744 1.00 61.61 P
ATOM 25 OP1 U A 10 23.080 19.321 53.162 1.00 66.64 O
ATOM 26 OP2 U A 10 22.245 19.030 50.748 1.00 60.27 O
ATOM 27 O5' U A 10 24.491 19.961 51.222 1.00 60.01 O
TER
ATOM 1 O3' A B 20 29.185 16.767 38.303 1.00 71.68 O
ATOM 2 P A B 21 30.461 15.923 38.795 1.00 75.21 P
ATOM 3 OP1 A B 21 30.878 15.066 37.659 1.00 79.94 O
ATOM 4 OP2 A B 21 30.200 15.309 40.116 1.00 70.76 O
ATOM 5 O5' A B 21 31.577 17.035 38.916 1.00 73.09 O
ATOM 6 C5' A B 21 31.971 17.769 37.765 1.00 70.33 C
ATOM 7 C4' A B 21 32.904 18.869 38.170 1.00 71.48 C
ATOM 8 O4' A B 21 32.178 19.814 38.993 1.00 73.77 O
ATOM 9 C3' A B 21 34.059 18.423 39.049 1.00 73.03 C
ATOM 10 O3' A B 21 35.129 17.889 38.277 1.00 72.93 O
ATOM 11 C2' A B 21 34.415 19.713 39.777 1.00 73.62 C
ATOM 12 O2' A B 21 35.182 20.631 39.032 1.00 73.82 O
ATOM 13 C1' A B 21 33.029 20.307 40.015 1.00 73.27 C
ATOM 14 N9 A B 21 32.507 19.897 41.328 1.00 70.03 N
ATOM 15 C8 A B 21 31.570 18.943 41.627 1.00 67.98 C
ATOM 16 N7 A B 21 31.362 18.794 42.914 1.00 67.18 N
ATOM 17 C5 A B 21 32.208 19.725 43.501 1.00 65.37 C
ATOM 18 C6 A B 21 32.455 20.069 44.827 1.00 63.90 C
ATOM 19 N6 A B 21 31.833 19.508 45.861 1.00 63.49 N
ATOM 20 N1 A B 21 33.373 21.028 45.065 1.00 64.37 N
ATOM 21 C2 A B 21 33.980 21.608 44.040 1.00 66.57 C
ATOM 22 N3 A B 21 33.829 21.388 42.754 1.00 67.83 N
ATOM 23 C4 A B 21 32.917 20.415 42.538 1.00 65.40 C
ATOM 24 P A B 22 36.203 16.895 38.952 1.00 74.71 P
ATOM 25 OP1 A B 22 37.282 16.622 37.983 1.00 82.56 O
ATOM 26 OP2 A B 22 35.477 15.762 39.580 1.00 76.00 O
ATOM 27 O5' A B 22 36.864 17.774 40.087 1.00 72.36 O
TER
Atoms:
OP1: (20.217,15.676,48.579)
OP2: (21.751,15.864,46.502)
C3': (24.497,16.939,50.618)
C1': (26.277,15.776,49.645)
C5': (22.846,15.104,50.092)
O4': (25.174,14.912,49.732)
C8: (25.678,15.890,47.167)
O2': (26.568,16.651,51.829)
C6: (28.508,17.300,45.658)
C5: (27.452,16.756,46.397)
C4: (27.615,16.707,47.756)
P: (21.492,15.331,47.869)
C4': (24.196,15.451,50.631)
C2': (26.011,16.950,50.575)
C2: (29.606,17.596,47.651)
N1: (29.599,17.706,46.329)
N3: (28.678,17.127,48.454)
N6: (28.489,17.438,44.333)
N7: (26.217,16.237,46.033)
N9: (26.485,16.119,48.247)
O5': (22.719,15.680,48.809)
O3': (24.029,17.561,51.809)
OP2: (21.751,15.864,46.502)
C3': (24.497,16.939,50.618)
C1': (26.277,15.776,49.645)
C5': (22.846,15.104,50.092)
O4': (25.174,14.912,49.732)
C8: (25.678,15.890,47.167)
O2': (26.568,16.651,51.829)
C6: (28.508,17.300,45.658)
C5: (27.452,16.756,46.397)
C4: (27.615,16.707,47.756)
P: (21.492,15.331,47.869)
C4': (24.196,15.451,50.631)
C2': (26.011,16.950,50.575)
C2: (29.606,17.596,47.651)
N1: (29.599,17.706,46.329)
N3: (28.678,17.127,48.454)
N6: (28.489,17.438,44.333)
N7: (26.217,16.237,46.033)
N9: (26.485,16.119,48.247)
O5': (22.719,15.680,48.809)
O3': (24.029,17.561,51.809)
OP1: (30.878,15.066,37.659)
OP2: (30.200,15.309,40.116)
C3': (34.059,18.423,39.049)
C1': (33.029,20.307,40.015)
C5': (31.971,17.769,37.765)
O4': (32.178,19.814,38.993)
C8: (31.570,18.943,41.627)
O2': (35.182,20.631,39.032)
C6: (32.455,20.069,44.827)
C5: (32.208,19.725,43.501)
C4: (32.917,20.415,42.538)
P: (30.461,15.923,38.795)
C4': (32.904,18.869,38.170)
C2': (34.415,19.713,39.777)
C2: (33.980,21.608,44.040)
N1: (33.373,21.028,45.065)
N3: (33.829,21.388,42.754)
N6: (31.833,19.508,45.861)
N7: (31.362,18.794,42.914)
N9: (32.507,19.897,41.328)
O5': (31.577,17.035,38.916)
O3': (35.129,17.889,38.277)
OP2: (30.200,15.309,40.116)
C3': (34.059,18.423,39.049)
C1': (33.029,20.307,40.015)
C5': (31.971,17.769,37.765)
O4': (32.178,19.814,38.993)
C8: (31.570,18.943,41.627)
O2': (35.182,20.631,39.032)
C6: (32.455,20.069,44.827)
C5: (32.208,19.725,43.501)
C4: (32.917,20.415,42.538)
P: (30.461,15.923,38.795)
C4': (32.904,18.869,38.170)
C2': (34.415,19.713,39.777)
C2: (33.980,21.608,44.040)
N1: (33.373,21.028,45.065)
N3: (33.829,21.388,42.754)
N6: (31.833,19.508,45.861)
N7: (31.362,18.794,42.914)
N9: (32.507,19.897,41.328)
O5': (31.577,17.035,38.916)
O3': (35.129,17.889,38.277)
Image (generated by PyMOL):