ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Y39:C10:C18

Extra

PDB:
ATOM 1 O3' U A 9 101.014 89.547 19.283 1.00 67.09 O
ATOM 2 P A A 10 102.290 89.763 20.236 1.00 66.38 P
ATOM 3 OP1 A A 10 102.470 88.510 21.018 1.00 65.64 O
ATOM 4 OP2 A A 10 102.103 91.064 20.945 1.00 64.18 O
ATOM 5 O5' A A 10 103.519 89.877 19.225 1.00 66.51 O
ATOM 6 C5' A A 10 103.706 91.041 18.425 1.00 68.37 C
ATOM 7 C4' A A 10 104.855 90.840 17.462 1.00 69.25 C
ATOM 8 O4' A A 10 106.104 90.738 18.195 1.00 69.87 O
ATOM 9 C3' A A 10 104.781 89.583 16.608 1.00 69.24 C
ATOM 10 O3' A A 10 105.460 89.848 15.386 1.00 69.30 O
ATOM 11 C2' A A 10 105.577 88.592 17.445 1.00 69.18 C
ATOM 12 O2' A A 10 106.102 87.498 16.728 1.00 67.33 O
ATOM 13 C1' A A 10 106.705 89.492 17.925 1.00 71.03 C
ATOM 14 N9 A A 10 107.350 89.018 19.141 1.00 74.52 N
ATOM 15 C8 A A 10 106.771 88.474 20.258 1.00 75.71 C
ATOM 16 N7 A A 10 107.635 88.120 21.180 1.00 77.54 N
ATOM 17 C5 A A 10 108.866 88.460 20.632 1.00 77.55 C
ATOM 18 C6 A A 10 110.187 88.332 21.106 1.00 77.77 C
ATOM 19 N6 A A 10 110.503 87.797 22.287 1.00 77.85 N
ATOM 20 N1 A A 10 111.185 88.776 20.311 1.00 78.14 N
ATOM 21 C2 A A 10 110.869 89.306 19.122 1.00 78.13 C
ATOM 22 N3 A A 10 109.672 89.475 18.565 1.00 77.41 N
ATOM 23 C4 A A 10 108.703 89.023 19.380 1.00 76.62 C
ATOM 24 P U A 11 104.618 90.078 14.034 1.00 69.08 P
ATOM 25 OP1 U A 11 105.557 90.631 13.010 1.00 68.37 O
ATOM 26 OP2 U A 11 103.374 90.831 14.377 1.00 68.84 O
ATOM 27 O5' U A 11 104.196 88.607 13.591 1.00 66.78 O
TER

ATOM 1 O3' G B 17 115.610 90.029 16.670 1.00 58.08 O
ATOM 2 P A B 18 114.568 89.125 15.848 1.00 60.87 P
ATOM 3 OP1 A B 18 113.553 88.577 16.788 1.00 59.35 O
ATOM 4 OP2 A B 18 115.379 88.187 15.012 1.00 60.04 O
ATOM 5 O5' A B 18 113.867 90.177 14.873 1.00 61.39 O
ATOM 6 C5' A B 18 113.255 91.362 15.379 1.00 62.38 C
ATOM 7 C4' A B 18 112.780 92.237 14.240 1.00 63.45 C
ATOM 8 O4' A B 18 113.840 93.121 13.769 1.00 64.54 O
ATOM 9 C3' A B 18 112.276 91.496 12.997 1.00 64.14 C
ATOM 10 O3' A B 18 111.204 92.240 12.414 1.00 64.75 O
ATOM 11 C2' A B 18 113.479 91.598 12.066 1.00 64.01 C
ATOM 12 O2' A B 18 113.171 91.445 10.698 1.00 63.91 O
ATOM 13 C1' A B 18 113.891 93.031 12.363 1.00 64.30 C
ATOM 14 N9 A B 18 115.174 93.508 11.850 1.00 64.39 N
ATOM 15 C8 A B 18 116.215 92.819 11.274 1.00 63.35 C
ATOM 16 N7 A B 18 117.152 93.600 10.783 1.00 63.39 N
ATOM 17 C5 A B 18 116.713 94.885 11.088 1.00 62.93 C
ATOM 18 C6 A B 18 117.240 96.172 10.815 1.00 62.67 C
ATOM 19 N6 A B 18 118.366 96.395 10.134 1.00 62.98 N
ATOM 20 N1 A B 18 116.549 97.240 11.264 1.00 62.11 N
ATOM 21 C2 A B 18 115.413 97.030 11.936 1.00 63.35 C
ATOM 22 N3 A B 18 114.812 95.880 12.246 1.00 63.16 N
ATOM 23 C4 A B 18 115.519 94.837 11.781 1.00 63.49 C
ATOM 24 P A B 19 109.723 91.622 12.381 1.00 64.46 P
ATOM 25 OP1 A B 19 109.850 90.165 12.111 1.00 65.11 O
ATOM 26 OP2 A B 19 108.872 92.461 11.489 1.00 66.21 O
ATOM 27 O5' A B 19 109.210 91.793 13.880 1.00 64.94 O
TER

Atoms:
OP1: (102.470,88.510,21.018)
OP2: (102.103,91.064,20.945)
C3': (104.781,89.583,16.608)
C1': (106.705,89.492,17.925)
C5': (103.706,91.041,18.425)
O4': (106.104,90.738,18.195)
C8: (106.771,88.474,20.258)
O2': (106.102,87.498,16.728)
C6: (110.187,88.332,21.106)
C5: (108.866,88.460,20.632)
C4: (108.703,89.023,19.380)
P: (102.290,89.763,20.236)
C4': (104.855,90.840,17.462)
C2': (105.577,88.592,17.445)
C2: (110.869,89.306,19.122)
N1: (111.185,88.776,20.311)
N3: (109.672,89.475,18.565)
N6: (110.503,87.797,22.287)
N7: (107.635,88.120,21.180)
N9: (107.350,89.018,19.141)
O5': (103.519,89.877,19.225)
O3': (105.460,89.848,15.386)
OP1: (113.553,88.577,16.788)
OP2: (115.379,88.187,15.012)
C3': (112.276,91.496,12.997)
C1': (113.891,93.031,12.363)
C5': (113.255,91.362,15.379)
O4': (113.840,93.121,13.769)
C8: (116.215,92.819,11.274)
O2': (113.171,91.445,10.698)
C6: (117.240,96.172,10.815)
C5: (116.713,94.885,11.088)
C4: (115.519,94.837,11.781)
P: (114.568,89.125,15.848)
C4': (112.780,92.237,14.240)
C2': (113.479,91.598,12.066)
C2: (115.413,97.030,11.936)
N1: (116.549,97.240,11.264)
N3: (114.812,95.880,12.246)
N6: (118.366,96.395,10.134)
N7: (117.152,93.600,10.783)
N9: (115.174,93.508,11.850)
O5': (113.867,90.177,14.873)
O3': (111.204,92.240,12.414)
Image (generated by PyMOL):
PyMOL image
show in jmol