Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y39:D10:D18
Extra
PDB:
ATOM 1 O3' U A 9 132.588 69.039 8.974 1.00 47.70 O
ATOM 2 P A A 10 133.503 67.985 8.185 1.00 47.81 P
ATOM 3 OP1 A A 10 134.702 67.644 8.992 1.00 47.34 O
ATOM 4 OP2 A A 10 133.666 68.503 6.800 1.00 48.47 O
ATOM 5 O5' A A 10 132.594 66.685 8.129 1.00 48.90 O
ATOM 6 C5' A A 10 131.276 66.739 7.595 1.00 50.12 C
ATOM 7 C4' A A 10 130.477 65.566 8.090 1.00 50.54 C
ATOM 8 O4' A A 10 131.266 64.369 7.837 1.00 49.88 O
ATOM 9 C3' A A 10 130.159 65.552 9.591 1.00 50.31 C
ATOM 10 O3' A A 10 128.909 64.911 9.811 1.00 50.38 O
ATOM 11 C2' A A 10 131.242 64.649 10.162 1.00 50.01 C
ATOM 12 O2' A A 10 130.789 63.958 11.301 1.00 50.92 O
ATOM 13 C1' A A 10 131.404 63.642 9.033 1.00 50.57 C
ATOM 14 N9 A A 10 132.695 62.968 9.022 1.00 51.82 N
ATOM 15 C8 A A 10 133.959 63.503 9.069 1.00 52.04 C
ATOM 16 N7 A A 10 134.912 62.604 9.033 1.00 52.28 N
ATOM 17 C5 A A 10 134.227 61.396 8.954 1.00 53.55 C
ATOM 18 C6 A A 10 134.660 60.057 8.861 1.00 54.11 C
ATOM 19 N6 A A 10 135.942 59.686 8.815 1.00 55.32 N
ATOM 20 N1 A A 10 133.713 59.098 8.803 1.00 54.47 N
ATOM 21 C2 A A 10 132.427 59.464 8.820 1.00 53.97 C
ATOM 22 N3 A A 10 131.898 60.677 8.891 1.00 53.43 N
ATOM 23 C4 A A 10 132.863 61.609 8.956 1.00 52.98 C
ATOM 24 P U A 11 127.649 65.770 10.285 1.00 49.40 P
ATOM 25 OP1 U A 11 126.456 64.897 10.189 1.00 49.57 O
ATOM 26 OP2 U A 11 127.683 67.041 9.528 1.00 50.70 O
ATOM 27 O5' U A 11 127.939 66.050 11.822 1.00 49.03 O
TER
ATOM 1 O3' G B 17 130.159 54.692 8.927 1.00 54.11 O
ATOM 2 P A B 18 129.768 55.744 10.081 1.00 52.26 P
ATOM 3 OP1 A B 18 130.810 56.798 10.068 1.00 50.48 O
ATOM 4 OP2 A B 18 129.514 54.979 11.338 1.00 51.45 O
ATOM 5 O5' A B 18 128.405 56.378 9.554 1.00 50.68 O
ATOM 6 C5' A B 18 128.405 57.206 8.400 1.00 52.18 C
ATOM 7 C4' A B 18 127.006 57.681 8.066 1.00 53.91 C
ATOM 8 O4' A B 18 126.219 56.610 7.462 1.00 55.90 O
ATOM 9 C3' A B 18 126.145 58.246 9.204 1.00 52.91 C
ATOM 10 O3' A B 18 125.310 59.266 8.647 1.00 52.82 O
ATOM 11 C2' A B 18 125.233 57.062 9.502 1.00 53.71 C
ATOM 12 O2' A B 18 124.024 57.413 10.133 1.00 52.86 O
ATOM 13 C1' A B 18 124.955 56.617 8.073 1.00 56.25 C
ATOM 14 N9 A B 18 124.243 55.365 7.838 1.00 57.88 N
ATOM 15 C8 A B 18 123.897 54.372 8.717 1.00 58.85 C
ATOM 16 N7 A B 18 123.093 53.471 8.201 1.00 60.05 N
ATOM 17 C5 A B 18 122.937 53.881 6.883 1.00 60.17 C
ATOM 18 C6 A B 18 122.181 53.370 5.810 1.00 61.07 C
ATOM 19 N6 A B 18 121.399 52.287 5.899 1.00 61.68 N
ATOM 20 N1 A B 18 122.252 54.022 4.628 1.00 60.66 N
ATOM 21 C2 A B 18 123.027 55.107 4.541 1.00 59.01 C
ATOM 22 N3 A B 18 123.773 55.685 5.475 1.00 59.15 N
ATOM 23 C4 A B 18 123.678 55.019 6.637 1.00 59.02 C
ATOM 24 P A B 19 125.352 60.771 9.222 1.00 51.55 P
ATOM 25 OP1 A B 19 125.632 60.722 10.687 1.00 52.03 O
ATOM 26 OP2 A B 19 124.142 61.505 8.737 1.00 50.94 O
ATOM 27 O5' A B 19 126.645 61.371 8.516 1.00 50.65 O
TER
ATOM 2 P A A 10 133.503 67.985 8.185 1.00 47.81 P
ATOM 3 OP1 A A 10 134.702 67.644 8.992 1.00 47.34 O
ATOM 4 OP2 A A 10 133.666 68.503 6.800 1.00 48.47 O
ATOM 5 O5' A A 10 132.594 66.685 8.129 1.00 48.90 O
ATOM 6 C5' A A 10 131.276 66.739 7.595 1.00 50.12 C
ATOM 7 C4' A A 10 130.477 65.566 8.090 1.00 50.54 C
ATOM 8 O4' A A 10 131.266 64.369 7.837 1.00 49.88 O
ATOM 9 C3' A A 10 130.159 65.552 9.591 1.00 50.31 C
ATOM 10 O3' A A 10 128.909 64.911 9.811 1.00 50.38 O
ATOM 11 C2' A A 10 131.242 64.649 10.162 1.00 50.01 C
ATOM 12 O2' A A 10 130.789 63.958 11.301 1.00 50.92 O
ATOM 13 C1' A A 10 131.404 63.642 9.033 1.00 50.57 C
ATOM 14 N9 A A 10 132.695 62.968 9.022 1.00 51.82 N
ATOM 15 C8 A A 10 133.959 63.503 9.069 1.00 52.04 C
ATOM 16 N7 A A 10 134.912 62.604 9.033 1.00 52.28 N
ATOM 17 C5 A A 10 134.227 61.396 8.954 1.00 53.55 C
ATOM 18 C6 A A 10 134.660 60.057 8.861 1.00 54.11 C
ATOM 19 N6 A A 10 135.942 59.686 8.815 1.00 55.32 N
ATOM 20 N1 A A 10 133.713 59.098 8.803 1.00 54.47 N
ATOM 21 C2 A A 10 132.427 59.464 8.820 1.00 53.97 C
ATOM 22 N3 A A 10 131.898 60.677 8.891 1.00 53.43 N
ATOM 23 C4 A A 10 132.863 61.609 8.956 1.00 52.98 C
ATOM 24 P U A 11 127.649 65.770 10.285 1.00 49.40 P
ATOM 25 OP1 U A 11 126.456 64.897 10.189 1.00 49.57 O
ATOM 26 OP2 U A 11 127.683 67.041 9.528 1.00 50.70 O
ATOM 27 O5' U A 11 127.939 66.050 11.822 1.00 49.03 O
TER
ATOM 1 O3' G B 17 130.159 54.692 8.927 1.00 54.11 O
ATOM 2 P A B 18 129.768 55.744 10.081 1.00 52.26 P
ATOM 3 OP1 A B 18 130.810 56.798 10.068 1.00 50.48 O
ATOM 4 OP2 A B 18 129.514 54.979 11.338 1.00 51.45 O
ATOM 5 O5' A B 18 128.405 56.378 9.554 1.00 50.68 O
ATOM 6 C5' A B 18 128.405 57.206 8.400 1.00 52.18 C
ATOM 7 C4' A B 18 127.006 57.681 8.066 1.00 53.91 C
ATOM 8 O4' A B 18 126.219 56.610 7.462 1.00 55.90 O
ATOM 9 C3' A B 18 126.145 58.246 9.204 1.00 52.91 C
ATOM 10 O3' A B 18 125.310 59.266 8.647 1.00 52.82 O
ATOM 11 C2' A B 18 125.233 57.062 9.502 1.00 53.71 C
ATOM 12 O2' A B 18 124.024 57.413 10.133 1.00 52.86 O
ATOM 13 C1' A B 18 124.955 56.617 8.073 1.00 56.25 C
ATOM 14 N9 A B 18 124.243 55.365 7.838 1.00 57.88 N
ATOM 15 C8 A B 18 123.897 54.372 8.717 1.00 58.85 C
ATOM 16 N7 A B 18 123.093 53.471 8.201 1.00 60.05 N
ATOM 17 C5 A B 18 122.937 53.881 6.883 1.00 60.17 C
ATOM 18 C6 A B 18 122.181 53.370 5.810 1.00 61.07 C
ATOM 19 N6 A B 18 121.399 52.287 5.899 1.00 61.68 N
ATOM 20 N1 A B 18 122.252 54.022 4.628 1.00 60.66 N
ATOM 21 C2 A B 18 123.027 55.107 4.541 1.00 59.01 C
ATOM 22 N3 A B 18 123.773 55.685 5.475 1.00 59.15 N
ATOM 23 C4 A B 18 123.678 55.019 6.637 1.00 59.02 C
ATOM 24 P A B 19 125.352 60.771 9.222 1.00 51.55 P
ATOM 25 OP1 A B 19 125.632 60.722 10.687 1.00 52.03 O
ATOM 26 OP2 A B 19 124.142 61.505 8.737 1.00 50.94 O
ATOM 27 O5' A B 19 126.645 61.371 8.516 1.00 50.65 O
TER
Atoms:
OP1: (134.702,67.644,8.992)
OP2: (133.666,68.503,6.800)
C3': (130.159,65.552,9.591)
C1': (131.404,63.642,9.033)
C5': (131.276,66.739,7.595)
O4': (131.266,64.369,7.837)
C8: (133.959,63.503,9.069)
O2': (130.789,63.958,11.301)
C6: (134.660,60.057,8.861)
C5: (134.227,61.396,8.954)
C4: (132.863,61.609,8.956)
P: (133.503,67.985,8.185)
C4': (130.477,65.566,8.090)
C2': (131.242,64.649,10.162)
C2: (132.427,59.464,8.820)
N1: (133.713,59.098,8.803)
N3: (131.898,60.677,8.891)
N6: (135.942,59.686,8.815)
N7: (134.912,62.604,9.033)
N9: (132.695,62.968,9.022)
O5': (132.594,66.685,8.129)
O3': (128.909,64.911,9.811)
OP2: (133.666,68.503,6.800)
C3': (130.159,65.552,9.591)
C1': (131.404,63.642,9.033)
C5': (131.276,66.739,7.595)
O4': (131.266,64.369,7.837)
C8: (133.959,63.503,9.069)
O2': (130.789,63.958,11.301)
C6: (134.660,60.057,8.861)
C5: (134.227,61.396,8.954)
C4: (132.863,61.609,8.956)
P: (133.503,67.985,8.185)
C4': (130.477,65.566,8.090)
C2': (131.242,64.649,10.162)
C2: (132.427,59.464,8.820)
N1: (133.713,59.098,8.803)
N3: (131.898,60.677,8.891)
N6: (135.942,59.686,8.815)
N7: (134.912,62.604,9.033)
N9: (132.695,62.968,9.022)
O5': (132.594,66.685,8.129)
O3': (128.909,64.911,9.811)
OP1: (130.810,56.798,10.068)
OP2: (129.514,54.979,11.338)
C3': (126.145,58.246,9.204)
C1': (124.955,56.617,8.073)
C5': (128.405,57.206,8.400)
O4': (126.219,56.610,7.462)
C8: (123.897,54.372,8.717)
O2': (124.024,57.413,10.133)
C6: (122.181,53.370,5.810)
C5: (122.937,53.881,6.883)
C4: (123.678,55.019,6.637)
P: (129.768,55.744,10.081)
C4': (127.006,57.681,8.066)
C2': (125.233,57.062,9.502)
C2: (123.027,55.107,4.541)
N1: (122.252,54.022,4.628)
N3: (123.773,55.685,5.475)
N6: (121.399,52.287,5.899)
N7: (123.093,53.471,8.201)
N9: (124.243,55.365,7.838)
O5': (128.405,56.378,9.554)
O3': (125.310,59.266,8.647)
OP2: (129.514,54.979,11.338)
C3': (126.145,58.246,9.204)
C1': (124.955,56.617,8.073)
C5': (128.405,57.206,8.400)
O4': (126.219,56.610,7.462)
C8: (123.897,54.372,8.717)
O2': (124.024,57.413,10.133)
C6: (122.181,53.370,5.810)
C5: (122.937,53.881,6.883)
C4: (123.678,55.019,6.637)
P: (129.768,55.744,10.081)
C4': (127.006,57.681,8.066)
C2': (125.233,57.062,9.502)
C2: (123.027,55.107,4.541)
N1: (122.252,54.022,4.628)
N3: (123.773,55.685,5.475)
N6: (121.399,52.287,5.899)
N7: (123.093,53.471,8.201)
N9: (124.243,55.365,7.838)
O5': (128.405,56.378,9.554)
O3': (125.310,59.266,8.647)
Image (generated by PyMOL):