ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YHQ:0304:0325

Extra

PDB:
ATOM 1 O3' G A 303 7.685 151.025 48.565 1.00 44.65 O
ATOM 2 P A A 304 6.776 150.022 47.708 1.00 45.08 P
ATOM 3 OP1 A A 304 5.887 150.880 46.889 1.00 44.94 O
ATOM 4 OP2 A A 304 6.178 149.009 48.624 1.00 44.54 O
ATOM 5 O5' A A 304 7.807 149.290 46.738 1.00 43.22 O
ATOM 6 C5' A A 304 8.532 150.033 45.739 1.00 41.47 C
ATOM 7 C4' A A 304 9.822 149.329 45.396 1.00 41.01 C
ATOM 8 O4' A A 304 10.597 149.149 46.609 1.00 41.20 O
ATOM 9 C3' A A 304 9.669 147.932 44.816 1.00 40.16 C
ATOM 10 O3' A A 304 9.517 148.019 43.398 1.00 41.45 O
ATOM 11 C2' A A 304 10.993 147.274 45.194 1.00 40.02 C
ATOM 12 O2' A A 304 12.043 147.627 44.318 1.00 39.16 O
ATOM 13 C1' A A 304 11.280 147.911 46.558 1.00 40.69 C
ATOM 14 N9 A A 304 10.885 147.118 47.725 1.00 40.70 N
ATOM 15 C8 A A 304 9.708 147.182 48.424 1.00 40.72 C
ATOM 16 N7 A A 304 9.653 146.360 49.444 1.00 40.34 N
ATOM 17 C5 A A 304 10.873 145.706 49.411 1.00 39.17 C
ATOM 18 C6 A A 304 11.433 144.707 50.227 1.00 40.21 C
ATOM 19 N6 A A 304 10.807 144.167 51.277 1.00 40.86 N
ATOM 20 N1 A A 304 12.674 144.274 49.924 1.00 38.96 N
ATOM 21 C2 A A 304 13.298 144.809 48.872 1.00 37.87 C
ATOM 22 N3 A A 304 12.877 145.746 48.032 1.00 39.16 N
ATOM 23 C4 A A 304 11.642 146.159 48.357 1.00 39.29 C
ATOM 24 P A A 305 8.195 147.448 42.680 1.00 40.33 P
ATOM 25 OP1 A A 305 8.242 147.879 41.263 1.00 42.55 O
ATOM 26 OP2 A A 305 7.021 147.800 43.513 1.00 43.26 O
ATOM 27 O5' A A 305 8.377 145.867 42.678 1.00 42.69 O
TER

ATOM 1 O3' G B 324 16.116 144.828 46.950 1.00 39.38 O
ATOM 2 P A B 325 16.990 143.624 47.551 1.00 41.56 P
ATOM 3 OP1 A B 325 17.332 144.019 48.941 1.00 40.94 O
ATOM 4 OP2 A B 325 18.072 143.262 46.595 1.00 37.35 O
ATOM 5 O5' A B 325 15.968 142.412 47.665 1.00 42.03 O
ATOM 6 C5' A B 325 15.701 141.544 46.554 1.00 41.19 C
ATOM 7 C4' A B 325 15.286 140.193 47.070 1.00 41.14 C
ATOM 8 O4' A B 325 14.244 140.362 48.073 1.00 40.19 O
ATOM 9 C3' A B 325 14.736 139.204 46.052 1.00 41.05 C
ATOM 10 O3' A B 325 15.076 137.902 46.522 1.00 43.03 O
ATOM 11 C2' A B 325 13.229 139.408 46.195 1.00 40.82 C
ATOM 12 O2' A B 325 12.444 138.306 45.774 1.00 42.88 O
ATOM 13 C1' A B 325 13.115 139.597 47.707 1.00 38.71 C
ATOM 14 N9 A B 325 11.920 140.285 48.183 1.00 35.89 N
ATOM 15 C8 A B 325 11.130 139.911 49.240 1.00 34.15 C
ATOM 16 N7 A B 325 10.132 140.727 49.469 1.00 34.49 N
ATOM 17 C5 A B 325 10.266 141.700 48.490 1.00 33.66 C
ATOM 18 C6 A B 325 9.505 142.837 48.180 1.00 33.15 C
ATOM 19 N6 A B 325 8.416 143.206 48.855 1.00 32.41 N
ATOM 20 N1 A B 325 9.905 143.591 47.134 1.00 34.16 N
ATOM 21 C2 A B 325 10.995 143.218 46.453 1.00 34.30 C
ATOM 22 N3 A B 325 11.791 142.168 46.645 1.00 35.33 N
ATOM 23 C4 A B 325 11.364 141.439 47.689 1.00 34.58 C
ATOM 24 P C B 326 16.295 137.096 45.862 1.00 43.97 P
ATOM 25 OP1 C B 326 16.930 136.311 46.946 1.00 45.16 O
ATOM 26 OP2 C B 326 17.124 138.036 45.069 1.00 44.86 O
ATOM 27 O5' C B 326 15.567 136.088 44.867 1.00 44.31 O
TER

Atoms:
OP1: (5.887,150.880,46.889)
OP2: (6.178,149.009,48.624)
C3': (9.669,147.932,44.816)
C1': (11.280,147.911,46.558)
C5': (8.532,150.033,45.739)
O4': (10.597,149.149,46.609)
C8: (9.708,147.182,48.424)
O2': (12.043,147.627,44.318)
C6: (11.433,144.707,50.227)
C5: (10.873,145.706,49.411)
C4: (11.642,146.159,48.357)
P: (6.776,150.022,47.708)
C4': (9.822,149.329,45.396)
C2': (10.993,147.274,45.194)
C2: (13.298,144.809,48.872)
N1: (12.674,144.274,49.924)
N3: (12.877,145.746,48.032)
N6: (10.807,144.167,51.277)
N7: (9.653,146.360,49.444)
N9: (10.885,147.118,47.725)
O5': (7.807,149.290,46.738)
O3': (9.517,148.019,43.398)
OP1: (17.332,144.019,48.941)
OP2: (18.072,143.262,46.595)
C3': (14.736,139.204,46.052)
C1': (13.115,139.597,47.707)
C5': (15.701,141.544,46.554)
O4': (14.244,140.362,48.073)
C8: (11.130,139.911,49.240)
O2': (12.444,138.306,45.774)
C6: (9.505,142.837,48.180)
C5: (10.266,141.700,48.490)
C4: (11.364,141.439,47.689)
P: (16.990,143.624,47.551)
C4': (15.286,140.193,47.070)
C2': (13.229,139.408,46.195)
C2: (10.995,143.218,46.453)
N1: (9.905,143.591,47.134)
N3: (11.791,142.168,46.645)
N6: (8.416,143.206,48.855)
N7: (10.132,140.727,49.469)
N9: (11.920,140.285,48.183)
O5': (15.968,142.412,47.665)
O3': (15.076,137.902,46.522)
Image (generated by PyMOL):
PyMOL image
show in jmol