Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0423:0224
Extra
PDB:
ATOM 1 O3' U A 422 66.592 115.230 15.896 1.00 32.97 O
ATOM 2 P A A 423 65.632 114.969 17.153 1.00 34.35 P
ATOM 3 OP1 A A 423 65.885 116.032 18.153 1.00 36.76 O
ATOM 4 OP2 A A 423 65.782 113.548 17.548 1.00 33.57 O
ATOM 5 O5' A A 423 64.171 115.206 16.576 1.00 33.47 O
ATOM 6 C5' A A 423 63.832 116.407 15.846 1.00 33.89 C
ATOM 7 C4' A A 423 62.523 116.206 15.112 1.00 34.84 C
ATOM 8 O4' A A 423 62.689 115.143 14.137 1.00 35.42 O
ATOM 9 C3' A A 423 61.379 115.751 16.006 1.00 35.78 C
ATOM 10 O3' A A 423 60.680 116.876 16.525 1.00 38.43 O
ATOM 11 C2' A A 423 60.512 114.921 15.069 1.00 35.70 C
ATOM 12 O2' A A 423 59.655 115.709 14.279 1.00 37.75 O
ATOM 13 C1' A A 423 61.563 114.284 14.162 1.00 34.43 C
ATOM 14 N9 A A 423 62.022 112.956 14.567 1.00 36.12 N
ATOM 15 C8 A A 423 63.217 112.630 15.165 1.00 36.33 C
ATOM 16 N7 A A 423 63.392 111.343 15.330 1.00 37.51 N
ATOM 17 C5 A A 423 62.227 110.783 14.830 1.00 36.86 C
ATOM 18 C6 A A 423 61.805 109.455 14.697 1.00 37.57 C
ATOM 19 N6 A A 423 62.540 108.402 15.062 1.00 38.43 N
ATOM 20 N1 A A 423 60.589 109.237 14.160 1.00 39.00 N
ATOM 21 C2 A A 423 59.856 110.294 13.779 1.00 38.44 C
ATOM 22 N3 A A 423 60.148 111.586 13.842 1.00 36.93 N
ATOM 23 C4 A A 423 61.363 111.766 14.381 1.00 36.34 C
ATOM 24 P A A 424 59.938 116.775 17.943 1.00 39.70 P
ATOM 25 OP1 A A 424 59.128 118.007 18.101 1.00 40.65 O
ATOM 26 OP2 A A 424 60.951 116.421 18.967 1.00 39.93 O
ATOM 27 O5' A A 424 58.948 115.542 17.777 1.00 40.21 O
TER
ATOM 1 O3' C B 223 58.068 107.989 12.010 1.00 39.75 O
ATOM 2 P A B 224 58.200 107.536 10.483 1.00 37.95 P
ATOM 3 OP1 A B 224 58.734 108.686 9.712 1.00 41.16 O
ATOM 4 OP2 A B 224 56.885 106.953 10.112 1.00 37.30 O
ATOM 5 O5' A B 224 59.317 106.404 10.582 1.00 33.39 O
ATOM 6 C5' A B 224 59.980 105.871 9.427 1.00 34.04 C
ATOM 7 C4' A B 224 61.460 105.732 9.710 1.00 35.08 C
ATOM 8 O4' A B 224 62.065 107.047 9.633 1.00 36.79 O
ATOM 9 C3' A B 224 61.820 105.182 11.091 1.00 34.39 C
ATOM 10 O3' A B 224 63.103 104.564 11.071 1.00 37.69 O
ATOM 11 C2' A B 224 61.985 106.465 11.899 1.00 35.20 C
ATOM 12 O2' A B 224 62.827 106.308 13.021 1.00 34.48 O
ATOM 13 C1' A B 224 62.663 107.364 10.870 1.00 35.24 C
ATOM 14 N9 A B 224 62.514 108.801 11.085 1.00 34.15 N
ATOM 15 C8 A B 224 61.399 109.579 10.889 1.00 33.57 C
ATOM 16 N7 A B 224 61.599 110.853 11.112 1.00 32.92 N
ATOM 17 C5 A B 224 62.932 110.919 11.491 1.00 31.53 C
ATOM 18 C6 A B 224 63.752 111.993 11.851 1.00 31.07 C
ATOM 19 N6 A B 224 63.330 113.255 11.886 1.00 31.97 N
ATOM 20 N1 A B 224 65.037 111.725 12.178 1.00 32.32 N
ATOM 21 C2 A B 224 65.455 110.451 12.145 1.00 33.72 C
ATOM 22 N3 A B 224 64.774 109.350 11.821 1.00 33.96 N
ATOM 23 C4 A B 224 63.504 109.660 11.496 1.00 33.20 C
ATOM 24 P G B 225 63.315 103.120 10.393 1.00 38.06 P
ATOM 25 OP1 G B 225 62.046 102.735 9.734 1.00 39.47 O
ATOM 26 OP2 G B 225 63.932 102.213 11.393 1.00 39.45 O
ATOM 27 O5' G B 225 64.421 103.425 9.286 1.00 39.44 O
TER
ATOM 2 P A A 423 65.632 114.969 17.153 1.00 34.35 P
ATOM 3 OP1 A A 423 65.885 116.032 18.153 1.00 36.76 O
ATOM 4 OP2 A A 423 65.782 113.548 17.548 1.00 33.57 O
ATOM 5 O5' A A 423 64.171 115.206 16.576 1.00 33.47 O
ATOM 6 C5' A A 423 63.832 116.407 15.846 1.00 33.89 C
ATOM 7 C4' A A 423 62.523 116.206 15.112 1.00 34.84 C
ATOM 8 O4' A A 423 62.689 115.143 14.137 1.00 35.42 O
ATOM 9 C3' A A 423 61.379 115.751 16.006 1.00 35.78 C
ATOM 10 O3' A A 423 60.680 116.876 16.525 1.00 38.43 O
ATOM 11 C2' A A 423 60.512 114.921 15.069 1.00 35.70 C
ATOM 12 O2' A A 423 59.655 115.709 14.279 1.00 37.75 O
ATOM 13 C1' A A 423 61.563 114.284 14.162 1.00 34.43 C
ATOM 14 N9 A A 423 62.022 112.956 14.567 1.00 36.12 N
ATOM 15 C8 A A 423 63.217 112.630 15.165 1.00 36.33 C
ATOM 16 N7 A A 423 63.392 111.343 15.330 1.00 37.51 N
ATOM 17 C5 A A 423 62.227 110.783 14.830 1.00 36.86 C
ATOM 18 C6 A A 423 61.805 109.455 14.697 1.00 37.57 C
ATOM 19 N6 A A 423 62.540 108.402 15.062 1.00 38.43 N
ATOM 20 N1 A A 423 60.589 109.237 14.160 1.00 39.00 N
ATOM 21 C2 A A 423 59.856 110.294 13.779 1.00 38.44 C
ATOM 22 N3 A A 423 60.148 111.586 13.842 1.00 36.93 N
ATOM 23 C4 A A 423 61.363 111.766 14.381 1.00 36.34 C
ATOM 24 P A A 424 59.938 116.775 17.943 1.00 39.70 P
ATOM 25 OP1 A A 424 59.128 118.007 18.101 1.00 40.65 O
ATOM 26 OP2 A A 424 60.951 116.421 18.967 1.00 39.93 O
ATOM 27 O5' A A 424 58.948 115.542 17.777 1.00 40.21 O
TER
ATOM 1 O3' C B 223 58.068 107.989 12.010 1.00 39.75 O
ATOM 2 P A B 224 58.200 107.536 10.483 1.00 37.95 P
ATOM 3 OP1 A B 224 58.734 108.686 9.712 1.00 41.16 O
ATOM 4 OP2 A B 224 56.885 106.953 10.112 1.00 37.30 O
ATOM 5 O5' A B 224 59.317 106.404 10.582 1.00 33.39 O
ATOM 6 C5' A B 224 59.980 105.871 9.427 1.00 34.04 C
ATOM 7 C4' A B 224 61.460 105.732 9.710 1.00 35.08 C
ATOM 8 O4' A B 224 62.065 107.047 9.633 1.00 36.79 O
ATOM 9 C3' A B 224 61.820 105.182 11.091 1.00 34.39 C
ATOM 10 O3' A B 224 63.103 104.564 11.071 1.00 37.69 O
ATOM 11 C2' A B 224 61.985 106.465 11.899 1.00 35.20 C
ATOM 12 O2' A B 224 62.827 106.308 13.021 1.00 34.48 O
ATOM 13 C1' A B 224 62.663 107.364 10.870 1.00 35.24 C
ATOM 14 N9 A B 224 62.514 108.801 11.085 1.00 34.15 N
ATOM 15 C8 A B 224 61.399 109.579 10.889 1.00 33.57 C
ATOM 16 N7 A B 224 61.599 110.853 11.112 1.00 32.92 N
ATOM 17 C5 A B 224 62.932 110.919 11.491 1.00 31.53 C
ATOM 18 C6 A B 224 63.752 111.993 11.851 1.00 31.07 C
ATOM 19 N6 A B 224 63.330 113.255 11.886 1.00 31.97 N
ATOM 20 N1 A B 224 65.037 111.725 12.178 1.00 32.32 N
ATOM 21 C2 A B 224 65.455 110.451 12.145 1.00 33.72 C
ATOM 22 N3 A B 224 64.774 109.350 11.821 1.00 33.96 N
ATOM 23 C4 A B 224 63.504 109.660 11.496 1.00 33.20 C
ATOM 24 P G B 225 63.315 103.120 10.393 1.00 38.06 P
ATOM 25 OP1 G B 225 62.046 102.735 9.734 1.00 39.47 O
ATOM 26 OP2 G B 225 63.932 102.213 11.393 1.00 39.45 O
ATOM 27 O5' G B 225 64.421 103.425 9.286 1.00 39.44 O
TER
Atoms:
OP1: (65.885,116.032,18.153)
OP2: (65.782,113.548,17.548)
C3': (61.379,115.751,16.006)
C1': (61.563,114.284,14.162)
C5': (63.832,116.407,15.846)
O4': (62.689,115.143,14.137)
C8: (63.217,112.630,15.165)
O2': (59.655,115.709,14.279)
C6: (61.805,109.455,14.697)
C5: (62.227,110.783,14.830)
C4: (61.363,111.766,14.381)
P: (65.632,114.969,17.153)
C4': (62.523,116.206,15.112)
C2': (60.512,114.921,15.069)
C2: (59.856,110.294,13.779)
N1: (60.589,109.237,14.160)
N3: (60.148,111.586,13.842)
N6: (62.540,108.402,15.062)
N7: (63.392,111.343,15.330)
N9: (62.022,112.956,14.567)
O5': (64.171,115.206,16.576)
O3': (60.680,116.876,16.525)
OP2: (65.782,113.548,17.548)
C3': (61.379,115.751,16.006)
C1': (61.563,114.284,14.162)
C5': (63.832,116.407,15.846)
O4': (62.689,115.143,14.137)
C8: (63.217,112.630,15.165)
O2': (59.655,115.709,14.279)
C6: (61.805,109.455,14.697)
C5: (62.227,110.783,14.830)
C4: (61.363,111.766,14.381)
P: (65.632,114.969,17.153)
C4': (62.523,116.206,15.112)
C2': (60.512,114.921,15.069)
C2: (59.856,110.294,13.779)
N1: (60.589,109.237,14.160)
N3: (60.148,111.586,13.842)
N6: (62.540,108.402,15.062)
N7: (63.392,111.343,15.330)
N9: (62.022,112.956,14.567)
O5': (64.171,115.206,16.576)
O3': (60.680,116.876,16.525)
OP1: (58.734,108.686,9.712)
OP2: (56.885,106.953,10.112)
C3': (61.820,105.182,11.091)
C1': (62.663,107.364,10.870)
C5': (59.980,105.871,9.427)
O4': (62.065,107.047,9.633)
C8: (61.399,109.579,10.889)
O2': (62.827,106.308,13.021)
C6: (63.752,111.993,11.851)
C5: (62.932,110.919,11.491)
C4: (63.504,109.660,11.496)
P: (58.200,107.536,10.483)
C4': (61.460,105.732,9.710)
C2': (61.985,106.465,11.899)
C2: (65.455,110.451,12.145)
N1: (65.037,111.725,12.178)
N3: (64.774,109.350,11.821)
N6: (63.330,113.255,11.886)
N7: (61.599,110.853,11.112)
N9: (62.514,108.801,11.085)
O5': (59.317,106.404,10.582)
O3': (63.103,104.564,11.071)
OP2: (56.885,106.953,10.112)
C3': (61.820,105.182,11.091)
C1': (62.663,107.364,10.870)
C5': (59.980,105.871,9.427)
O4': (62.065,107.047,9.633)
C8: (61.399,109.579,10.889)
O2': (62.827,106.308,13.021)
C6: (63.752,111.993,11.851)
C5: (62.932,110.919,11.491)
C4: (63.504,109.660,11.496)
P: (58.200,107.536,10.483)
C4': (61.460,105.732,9.710)
C2': (61.985,106.465,11.899)
C2: (65.455,110.451,12.145)
N1: (65.037,111.725,12.178)
N3: (64.774,109.350,11.821)
N6: (63.330,113.255,11.886)
N7: (61.599,110.853,11.112)
N9: (62.514,108.801,11.085)
O5': (59.317,106.404,10.582)
O3': (63.103,104.564,11.071)
Image (generated by PyMOL):