Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0304:0325
Extra
PDB:
ATOM 1 O3' G A 303 7.901 151.457 48.442 1.00 54.46 O
ATOM 2 P A A 304 6.904 150.463 47.677 1.00 54.78 P
ATOM 3 OP1 A A 304 5.922 151.314 46.965 1.00 56.51 O
ATOM 4 OP2 A A 304 6.423 149.447 48.652 1.00 56.40 O
ATOM 5 O5' A A 304 7.822 149.740 46.597 1.00 51.45 O
ATOM 6 C5' A A 304 8.548 150.509 45.628 1.00 49.15 C
ATOM 7 C4' A A 304 9.859 149.839 45.312 1.00 48.19 C
ATOM 8 O4' A A 304 10.625 149.695 46.536 1.00 47.59 O
ATOM 9 C3' A A 304 9.742 148.433 44.751 1.00 47.69 C
ATOM 10 O3' A A 304 9.607 148.501 43.327 1.00 49.11 O
ATOM 11 C2' A A 304 11.080 147.813 45.148 1.00 47.39 C
ATOM 12 O2' A A 304 12.125 148.177 44.272 1.00 47.44 O
ATOM 13 C1' A A 304 11.348 148.478 46.503 1.00 46.92 C
ATOM 14 N9 A A 304 10.986 147.686 47.681 1.00 46.30 N
ATOM 15 C8 A A 304 9.829 147.752 48.416 1.00 46.05 C
ATOM 16 N7 A A 304 9.802 146.930 49.436 1.00 45.97 N
ATOM 17 C5 A A 304 11.022 146.274 49.368 1.00 45.24 C
ATOM 18 C6 A A 304 11.607 145.279 50.171 1.00 44.49 C
ATOM 19 N6 A A 304 11.019 144.749 51.243 1.00 44.29 N
ATOM 20 N1 A A 304 12.837 144.842 49.830 1.00 43.89 N
ATOM 21 C2 A A 304 13.429 145.372 48.758 1.00 42.26 C
ATOM 22 N3 A A 304 12.985 146.308 47.930 1.00 44.03 N
ATOM 23 C4 A A 304 11.760 146.725 48.291 1.00 45.31 C
ATOM 24 P A A 305 8.282 147.946 42.598 1.00 48.62 P
ATOM 25 OP1 A A 305 8.372 148.385 41.183 1.00 48.09 O
ATOM 26 OP2 A A 305 7.094 148.327 43.411 1.00 48.48 O
ATOM 27 O5' A A 305 8.443 146.359 42.592 1.00 47.65 O
TER
ATOM 1 O3' G B 324 16.228 145.455 46.823 1.00 44.70 O
ATOM 2 P A B 325 17.104 144.246 47.415 1.00 42.94 P
ATOM 3 OP1 A B 325 17.435 144.641 48.796 1.00 43.83 O
ATOM 4 OP2 A B 325 18.194 143.875 46.470 1.00 41.16 O
ATOM 5 O5' A B 325 16.076 143.039 47.529 1.00 44.87 O
ATOM 6 C5' A B 325 15.891 142.101 46.458 1.00 44.53 C
ATOM 7 C4' A B 325 15.504 140.765 47.031 1.00 43.76 C
ATOM 8 O4' A B 325 14.457 140.954 48.021 1.00 44.48 O
ATOM 9 C3' A B 325 14.979 139.721 46.059 1.00 44.59 C
ATOM 10 O3' A B 325 15.362 138.458 46.579 1.00 44.27 O
ATOM 11 C2' A B 325 13.465 139.885 46.199 1.00 44.92 C
ATOM 12 O2' A B 325 12.721 138.738 45.840 1.00 48.19 O
ATOM 13 C1' A B 325 13.349 140.140 47.698 1.00 44.31 C
ATOM 14 N9 A B 325 12.140 140.824 48.147 1.00 43.76 N
ATOM 15 C8 A B 325 11.322 140.456 49.184 1.00 43.20 C
ATOM 16 N7 A B 325 10.335 141.289 49.401 1.00 43.51 N
ATOM 17 C5 A B 325 10.503 142.265 48.429 1.00 43.29 C
ATOM 18 C6 A B 325 9.779 143.427 48.121 1.00 43.10 C
ATOM 19 N6 A B 325 8.697 143.831 48.789 1.00 42.44 N
ATOM 20 N1 A B 325 10.213 144.177 47.088 1.00 44.70 N
ATOM 21 C2 A B 325 11.303 143.779 46.418 1.00 44.31 C
ATOM 22 N3 A B 325 12.067 142.710 46.611 1.00 43.43 N
ATOM 23 C4 A B 325 11.607 141.985 47.644 1.00 43.74 C
ATOM 24 P C B 326 16.494 137.595 45.848 1.00 45.73 P
ATOM 25 OP1 C B 326 17.176 136.800 46.900 1.00 47.23 O
ATOM 26 OP2 C B 326 17.299 138.482 44.972 1.00 47.58 O
ATOM 27 O5' C B 326 15.666 136.591 44.931 1.00 47.58 O
TER
ATOM 2 P A A 304 6.904 150.463 47.677 1.00 54.78 P
ATOM 3 OP1 A A 304 5.922 151.314 46.965 1.00 56.51 O
ATOM 4 OP2 A A 304 6.423 149.447 48.652 1.00 56.40 O
ATOM 5 O5' A A 304 7.822 149.740 46.597 1.00 51.45 O
ATOM 6 C5' A A 304 8.548 150.509 45.628 1.00 49.15 C
ATOM 7 C4' A A 304 9.859 149.839 45.312 1.00 48.19 C
ATOM 8 O4' A A 304 10.625 149.695 46.536 1.00 47.59 O
ATOM 9 C3' A A 304 9.742 148.433 44.751 1.00 47.69 C
ATOM 10 O3' A A 304 9.607 148.501 43.327 1.00 49.11 O
ATOM 11 C2' A A 304 11.080 147.813 45.148 1.00 47.39 C
ATOM 12 O2' A A 304 12.125 148.177 44.272 1.00 47.44 O
ATOM 13 C1' A A 304 11.348 148.478 46.503 1.00 46.92 C
ATOM 14 N9 A A 304 10.986 147.686 47.681 1.00 46.30 N
ATOM 15 C8 A A 304 9.829 147.752 48.416 1.00 46.05 C
ATOM 16 N7 A A 304 9.802 146.930 49.436 1.00 45.97 N
ATOM 17 C5 A A 304 11.022 146.274 49.368 1.00 45.24 C
ATOM 18 C6 A A 304 11.607 145.279 50.171 1.00 44.49 C
ATOM 19 N6 A A 304 11.019 144.749 51.243 1.00 44.29 N
ATOM 20 N1 A A 304 12.837 144.842 49.830 1.00 43.89 N
ATOM 21 C2 A A 304 13.429 145.372 48.758 1.00 42.26 C
ATOM 22 N3 A A 304 12.985 146.308 47.930 1.00 44.03 N
ATOM 23 C4 A A 304 11.760 146.725 48.291 1.00 45.31 C
ATOM 24 P A A 305 8.282 147.946 42.598 1.00 48.62 P
ATOM 25 OP1 A A 305 8.372 148.385 41.183 1.00 48.09 O
ATOM 26 OP2 A A 305 7.094 148.327 43.411 1.00 48.48 O
ATOM 27 O5' A A 305 8.443 146.359 42.592 1.00 47.65 O
TER
ATOM 1 O3' G B 324 16.228 145.455 46.823 1.00 44.70 O
ATOM 2 P A B 325 17.104 144.246 47.415 1.00 42.94 P
ATOM 3 OP1 A B 325 17.435 144.641 48.796 1.00 43.83 O
ATOM 4 OP2 A B 325 18.194 143.875 46.470 1.00 41.16 O
ATOM 5 O5' A B 325 16.076 143.039 47.529 1.00 44.87 O
ATOM 6 C5' A B 325 15.891 142.101 46.458 1.00 44.53 C
ATOM 7 C4' A B 325 15.504 140.765 47.031 1.00 43.76 C
ATOM 8 O4' A B 325 14.457 140.954 48.021 1.00 44.48 O
ATOM 9 C3' A B 325 14.979 139.721 46.059 1.00 44.59 C
ATOM 10 O3' A B 325 15.362 138.458 46.579 1.00 44.27 O
ATOM 11 C2' A B 325 13.465 139.885 46.199 1.00 44.92 C
ATOM 12 O2' A B 325 12.721 138.738 45.840 1.00 48.19 O
ATOM 13 C1' A B 325 13.349 140.140 47.698 1.00 44.31 C
ATOM 14 N9 A B 325 12.140 140.824 48.147 1.00 43.76 N
ATOM 15 C8 A B 325 11.322 140.456 49.184 1.00 43.20 C
ATOM 16 N7 A B 325 10.335 141.289 49.401 1.00 43.51 N
ATOM 17 C5 A B 325 10.503 142.265 48.429 1.00 43.29 C
ATOM 18 C6 A B 325 9.779 143.427 48.121 1.00 43.10 C
ATOM 19 N6 A B 325 8.697 143.831 48.789 1.00 42.44 N
ATOM 20 N1 A B 325 10.213 144.177 47.088 1.00 44.70 N
ATOM 21 C2 A B 325 11.303 143.779 46.418 1.00 44.31 C
ATOM 22 N3 A B 325 12.067 142.710 46.611 1.00 43.43 N
ATOM 23 C4 A B 325 11.607 141.985 47.644 1.00 43.74 C
ATOM 24 P C B 326 16.494 137.595 45.848 1.00 45.73 P
ATOM 25 OP1 C B 326 17.176 136.800 46.900 1.00 47.23 O
ATOM 26 OP2 C B 326 17.299 138.482 44.972 1.00 47.58 O
ATOM 27 O5' C B 326 15.666 136.591 44.931 1.00 47.58 O
TER
Atoms:
OP1: (5.922,151.314,46.965)
OP2: (6.423,149.447,48.652)
C3': (9.742,148.433,44.751)
C1': (11.348,148.478,46.503)
C5': (8.548,150.509,45.628)
O4': (10.625,149.695,46.536)
C8: (9.829,147.752,48.416)
O2': (12.125,148.177,44.272)
C6: (11.607,145.279,50.171)
C5: (11.022,146.274,49.368)
C4: (11.760,146.725,48.291)
P: (6.904,150.463,47.677)
C4': (9.859,149.839,45.312)
C2': (11.080,147.813,45.148)
C2: (13.429,145.372,48.758)
N1: (12.837,144.842,49.830)
N3: (12.985,146.308,47.930)
N6: (11.019,144.749,51.243)
N7: (9.802,146.930,49.436)
N9: (10.986,147.686,47.681)
O5': (7.822,149.740,46.597)
O3': (9.607,148.501,43.327)
OP2: (6.423,149.447,48.652)
C3': (9.742,148.433,44.751)
C1': (11.348,148.478,46.503)
C5': (8.548,150.509,45.628)
O4': (10.625,149.695,46.536)
C8: (9.829,147.752,48.416)
O2': (12.125,148.177,44.272)
C6: (11.607,145.279,50.171)
C5: (11.022,146.274,49.368)
C4: (11.760,146.725,48.291)
P: (6.904,150.463,47.677)
C4': (9.859,149.839,45.312)
C2': (11.080,147.813,45.148)
C2: (13.429,145.372,48.758)
N1: (12.837,144.842,49.830)
N3: (12.985,146.308,47.930)
N6: (11.019,144.749,51.243)
N7: (9.802,146.930,49.436)
N9: (10.986,147.686,47.681)
O5': (7.822,149.740,46.597)
O3': (9.607,148.501,43.327)
OP1: (17.435,144.641,48.796)
OP2: (18.194,143.875,46.470)
C3': (14.979,139.721,46.059)
C1': (13.349,140.140,47.698)
C5': (15.891,142.101,46.458)
O4': (14.457,140.954,48.021)
C8: (11.322,140.456,49.184)
O2': (12.721,138.738,45.840)
C6: (9.779,143.427,48.121)
C5: (10.503,142.265,48.429)
C4: (11.607,141.985,47.644)
P: (17.104,144.246,47.415)
C4': (15.504,140.765,47.031)
C2': (13.465,139.885,46.199)
C2: (11.303,143.779,46.418)
N1: (10.213,144.177,47.088)
N3: (12.067,142.710,46.611)
N6: (8.697,143.831,48.789)
N7: (10.335,141.289,49.401)
N9: (12.140,140.824,48.147)
O5': (16.076,143.039,47.529)
O3': (15.362,138.458,46.579)
OP2: (18.194,143.875,46.470)
C3': (14.979,139.721,46.059)
C1': (13.349,140.140,47.698)
C5': (15.891,142.101,46.458)
O4': (14.457,140.954,48.021)
C8: (11.322,140.456,49.184)
O2': (12.721,138.738,45.840)
C6: (9.779,143.427,48.121)
C5: (10.503,142.265,48.429)
C4: (11.607,141.985,47.644)
P: (17.104,144.246,47.415)
C4': (15.504,140.765,47.031)
C2': (13.465,139.885,46.199)
C2: (11.303,143.779,46.418)
N1: (10.213,144.177,47.088)
N3: (12.067,142.710,46.611)
N6: (8.697,143.831,48.789)
N7: (10.335,141.289,49.401)
N9: (12.140,140.824,48.147)
O5': (16.076,143.039,47.529)
O3': (15.362,138.458,46.579)
Image (generated by PyMOL):