Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0304:0325
Extra
PDB:
ATOM 1 O3' G A 303 7.980 151.293 48.497 1.00 56.49 O
ATOM 2 P A A 304 7.060 150.247 47.706 1.00 56.49 P
ATOM 3 OP1 A A 304 6.043 151.023 46.958 1.00 57.72 O
ATOM 4 OP2 A A 304 6.622 149.211 48.679 1.00 58.22 O
ATOM 5 O5' A A 304 8.057 149.598 46.652 1.00 53.28 O
ATOM 6 C5' A A 304 8.823 150.436 45.779 1.00 50.49 C
ATOM 7 C4' A A 304 10.138 149.785 45.462 1.00 49.66 C
ATOM 8 O4' A A 304 10.879 149.569 46.688 1.00 50.07 O
ATOM 9 C3' A A 304 10.013 148.415 44.828 1.00 48.15 C
ATOM 10 O3' A A 304 9.878 148.574 43.417 1.00 47.78 O
ATOM 11 C2' A A 304 11.332 147.752 45.215 1.00 48.82 C
ATOM 12 O2' A A 304 12.396 148.138 44.372 1.00 47.08 O
ATOM 13 C1' A A 304 11.581 148.342 46.609 1.00 49.75 C
ATOM 14 N9 A A 304 11.187 147.515 47.755 1.00 50.24 N
ATOM 15 C8 A A 304 10.013 147.576 48.465 1.00 50.88 C
ATOM 16 N7 A A 304 9.965 146.750 49.481 1.00 51.44 N
ATOM 17 C5 A A 304 11.185 146.090 49.432 1.00 50.81 C
ATOM 18 C6 A A 304 11.755 145.090 50.243 1.00 50.20 C
ATOM 19 N6 A A 304 11.150 144.568 51.309 1.00 51.70 N
ATOM 20 N1 A A 304 12.984 144.641 49.916 1.00 49.23 N
ATOM 21 C2 A A 304 13.592 145.166 48.853 1.00 49.01 C
ATOM 22 N3 A A 304 13.166 146.112 48.020 1.00 49.76 N
ATOM 23 C4 A A 304 11.941 146.539 48.367 1.00 50.09 C
ATOM 24 P A A 305 8.617 147.942 42.648 1.00 46.68 P
ATOM 25 OP1 A A 305 8.702 148.296 41.212 1.00 46.00 O
ATOM 26 OP2 A A 305 7.391 148.276 43.421 1.00 47.44 O
ATOM 27 O5' A A 305 8.855 146.377 42.723 1.00 45.08 O
TER
ATOM 1 O3' G B 324 16.375 145.288 46.858 1.00 43.27 O
ATOM 2 P A B 325 17.239 144.054 47.414 1.00 42.80 P
ATOM 3 OP1 A B 325 17.637 144.421 48.785 1.00 44.84 O
ATOM 4 OP2 A B 325 18.283 143.662 46.427 1.00 42.00 O
ATOM 5 O5' A B 325 16.185 142.875 47.531 1.00 44.09 O
ATOM 6 C5' A B 325 15.969 141.959 46.450 1.00 44.89 C
ATOM 7 C4' A B 325 15.608 140.614 47.009 1.00 45.46 C
ATOM 8 O4' A B 325 14.599 140.788 48.039 1.00 45.18 O
ATOM 9 C3' A B 325 15.045 139.595 46.033 1.00 46.32 C
ATOM 10 O3' A B 325 15.437 138.324 46.524 1.00 48.52 O
ATOM 11 C2' A B 325 13.539 139.771 46.224 1.00 46.02 C
ATOM 12 O2' A B 325 12.771 138.635 45.886 1.00 48.92 O
ATOM 13 C1' A B 325 13.469 140.006 47.729 1.00 44.36 C
ATOM 14 N9 A B 325 12.284 140.710 48.206 1.00 43.76 N
ATOM 15 C8 A B 325 11.487 140.358 49.265 1.00 43.59 C
ATOM 16 N7 A B 325 10.499 141.187 49.482 1.00 42.93 N
ATOM 17 C5 A B 325 10.648 142.148 48.493 1.00 42.98 C
ATOM 18 C6 A B 325 9.914 143.298 48.177 1.00 42.55 C
ATOM 19 N6 A B 325 8.837 143.703 48.853 1.00 42.36 N
ATOM 20 N1 A B 325 10.331 144.035 47.130 1.00 44.65 N
ATOM 21 C2 A B 325 11.415 143.637 46.455 1.00 44.43 C
ATOM 22 N3 A B 325 12.187 142.578 46.655 1.00 43.24 N
ATOM 23 C4 A B 325 11.744 141.866 47.700 1.00 43.52 C
ATOM 24 P C B 326 16.625 137.516 45.819 1.00 50.69 P
ATOM 25 OP1 C B 326 17.390 136.836 46.896 1.00 51.38 O
ATOM 26 OP2 C B 326 17.340 138.399 44.871 1.00 52.58 O
ATOM 27 O5' C B 326 15.848 136.418 44.971 1.00 52.29 O
TER
ATOM 2 P A A 304 7.060 150.247 47.706 1.00 56.49 P
ATOM 3 OP1 A A 304 6.043 151.023 46.958 1.00 57.72 O
ATOM 4 OP2 A A 304 6.622 149.211 48.679 1.00 58.22 O
ATOM 5 O5' A A 304 8.057 149.598 46.652 1.00 53.28 O
ATOM 6 C5' A A 304 8.823 150.436 45.779 1.00 50.49 C
ATOM 7 C4' A A 304 10.138 149.785 45.462 1.00 49.66 C
ATOM 8 O4' A A 304 10.879 149.569 46.688 1.00 50.07 O
ATOM 9 C3' A A 304 10.013 148.415 44.828 1.00 48.15 C
ATOM 10 O3' A A 304 9.878 148.574 43.417 1.00 47.78 O
ATOM 11 C2' A A 304 11.332 147.752 45.215 1.00 48.82 C
ATOM 12 O2' A A 304 12.396 148.138 44.372 1.00 47.08 O
ATOM 13 C1' A A 304 11.581 148.342 46.609 1.00 49.75 C
ATOM 14 N9 A A 304 11.187 147.515 47.755 1.00 50.24 N
ATOM 15 C8 A A 304 10.013 147.576 48.465 1.00 50.88 C
ATOM 16 N7 A A 304 9.965 146.750 49.481 1.00 51.44 N
ATOM 17 C5 A A 304 11.185 146.090 49.432 1.00 50.81 C
ATOM 18 C6 A A 304 11.755 145.090 50.243 1.00 50.20 C
ATOM 19 N6 A A 304 11.150 144.568 51.309 1.00 51.70 N
ATOM 20 N1 A A 304 12.984 144.641 49.916 1.00 49.23 N
ATOM 21 C2 A A 304 13.592 145.166 48.853 1.00 49.01 C
ATOM 22 N3 A A 304 13.166 146.112 48.020 1.00 49.76 N
ATOM 23 C4 A A 304 11.941 146.539 48.367 1.00 50.09 C
ATOM 24 P A A 305 8.617 147.942 42.648 1.00 46.68 P
ATOM 25 OP1 A A 305 8.702 148.296 41.212 1.00 46.00 O
ATOM 26 OP2 A A 305 7.391 148.276 43.421 1.00 47.44 O
ATOM 27 O5' A A 305 8.855 146.377 42.723 1.00 45.08 O
TER
ATOM 1 O3' G B 324 16.375 145.288 46.858 1.00 43.27 O
ATOM 2 P A B 325 17.239 144.054 47.414 1.00 42.80 P
ATOM 3 OP1 A B 325 17.637 144.421 48.785 1.00 44.84 O
ATOM 4 OP2 A B 325 18.283 143.662 46.427 1.00 42.00 O
ATOM 5 O5' A B 325 16.185 142.875 47.531 1.00 44.09 O
ATOM 6 C5' A B 325 15.969 141.959 46.450 1.00 44.89 C
ATOM 7 C4' A B 325 15.608 140.614 47.009 1.00 45.46 C
ATOM 8 O4' A B 325 14.599 140.788 48.039 1.00 45.18 O
ATOM 9 C3' A B 325 15.045 139.595 46.033 1.00 46.32 C
ATOM 10 O3' A B 325 15.437 138.324 46.524 1.00 48.52 O
ATOM 11 C2' A B 325 13.539 139.771 46.224 1.00 46.02 C
ATOM 12 O2' A B 325 12.771 138.635 45.886 1.00 48.92 O
ATOM 13 C1' A B 325 13.469 140.006 47.729 1.00 44.36 C
ATOM 14 N9 A B 325 12.284 140.710 48.206 1.00 43.76 N
ATOM 15 C8 A B 325 11.487 140.358 49.265 1.00 43.59 C
ATOM 16 N7 A B 325 10.499 141.187 49.482 1.00 42.93 N
ATOM 17 C5 A B 325 10.648 142.148 48.493 1.00 42.98 C
ATOM 18 C6 A B 325 9.914 143.298 48.177 1.00 42.55 C
ATOM 19 N6 A B 325 8.837 143.703 48.853 1.00 42.36 N
ATOM 20 N1 A B 325 10.331 144.035 47.130 1.00 44.65 N
ATOM 21 C2 A B 325 11.415 143.637 46.455 1.00 44.43 C
ATOM 22 N3 A B 325 12.187 142.578 46.655 1.00 43.24 N
ATOM 23 C4 A B 325 11.744 141.866 47.700 1.00 43.52 C
ATOM 24 P C B 326 16.625 137.516 45.819 1.00 50.69 P
ATOM 25 OP1 C B 326 17.390 136.836 46.896 1.00 51.38 O
ATOM 26 OP2 C B 326 17.340 138.399 44.871 1.00 52.58 O
ATOM 27 O5' C B 326 15.848 136.418 44.971 1.00 52.29 O
TER
Atoms:
OP1: (6.043,151.023,46.958)
OP2: (6.622,149.211,48.679)
C3': (10.013,148.415,44.828)
C1': (11.581,148.342,46.609)
C5': (8.823,150.436,45.779)
O4': (10.879,149.569,46.688)
C8: (10.013,147.576,48.465)
O2': (12.396,148.138,44.372)
C6: (11.755,145.090,50.243)
C5: (11.185,146.090,49.432)
C4: (11.941,146.539,48.367)
P: (7.060,150.247,47.706)
C4': (10.138,149.785,45.462)
C2': (11.332,147.752,45.215)
C2: (13.592,145.166,48.853)
N1: (12.984,144.641,49.916)
N3: (13.166,146.112,48.020)
N6: (11.150,144.568,51.309)
N7: (9.965,146.750,49.481)
N9: (11.187,147.515,47.755)
O5': (8.057,149.598,46.652)
O3': (9.878,148.574,43.417)
OP2: (6.622,149.211,48.679)
C3': (10.013,148.415,44.828)
C1': (11.581,148.342,46.609)
C5': (8.823,150.436,45.779)
O4': (10.879,149.569,46.688)
C8: (10.013,147.576,48.465)
O2': (12.396,148.138,44.372)
C6: (11.755,145.090,50.243)
C5: (11.185,146.090,49.432)
C4: (11.941,146.539,48.367)
P: (7.060,150.247,47.706)
C4': (10.138,149.785,45.462)
C2': (11.332,147.752,45.215)
C2: (13.592,145.166,48.853)
N1: (12.984,144.641,49.916)
N3: (13.166,146.112,48.020)
N6: (11.150,144.568,51.309)
N7: (9.965,146.750,49.481)
N9: (11.187,147.515,47.755)
O5': (8.057,149.598,46.652)
O3': (9.878,148.574,43.417)
OP1: (17.637,144.421,48.785)
OP2: (18.283,143.662,46.427)
C3': (15.045,139.595,46.033)
C1': (13.469,140.006,47.729)
C5': (15.969,141.959,46.450)
O4': (14.599,140.788,48.039)
C8: (11.487,140.358,49.265)
O2': (12.771,138.635,45.886)
C6: (9.914,143.298,48.177)
C5: (10.648,142.148,48.493)
C4: (11.744,141.866,47.700)
P: (17.239,144.054,47.414)
C4': (15.608,140.614,47.009)
C2': (13.539,139.771,46.224)
C2: (11.415,143.637,46.455)
N1: (10.331,144.035,47.130)
N3: (12.187,142.578,46.655)
N6: (8.837,143.703,48.853)
N7: (10.499,141.187,49.482)
N9: (12.284,140.710,48.206)
O5': (16.185,142.875,47.531)
O3': (15.437,138.324,46.524)
OP2: (18.283,143.662,46.427)
C3': (15.045,139.595,46.033)
C1': (13.469,140.006,47.729)
C5': (15.969,141.959,46.450)
O4': (14.599,140.788,48.039)
C8: (11.487,140.358,49.265)
O2': (12.771,138.635,45.886)
C6: (9.914,143.298,48.177)
C5: (10.648,142.148,48.493)
C4: (11.744,141.866,47.700)
P: (17.239,144.054,47.414)
C4': (15.608,140.614,47.009)
C2': (13.539,139.771,46.224)
C2: (11.415,143.637,46.455)
N1: (10.331,144.035,47.130)
N3: (12.187,142.578,46.655)
N6: (8.837,143.703,48.853)
N7: (10.499,141.187,49.482)
N9: (12.284,140.710,48.206)
O5': (16.185,142.875,47.531)
O3': (15.437,138.324,46.524)
Image (generated by PyMOL):