Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0304:0325
Extra
PDB:
ATOM 1 O3' G A 303 8.096 151.601 48.556 1.00 68.17 O
ATOM 2 P A A 304 7.121 150.592 47.778 1.00 67.47 P
ATOM 3 OP1 A A 304 6.107 151.420 47.096 1.00 70.16 O
ATOM 4 OP2 A A 304 6.689 149.520 48.703 1.00 69.22 O
ATOM 5 O5' A A 304 8.046 149.961 46.655 1.00 66.81 O
ATOM 6 C5' A A 304 8.882 150.805 45.854 1.00 65.27 C
ATOM 7 C4' A A 304 10.181 150.107 45.571 1.00 63.45 C
ATOM 8 O4' A A 304 10.897 149.888 46.812 1.00 62.65 O
ATOM 9 C3' A A 304 10.001 148.727 44.972 1.00 61.88 C
ATOM 10 O3' A A 304 9.840 148.870 43.556 1.00 61.76 O
ATOM 11 C2' A A 304 11.293 148.024 45.381 1.00 62.20 C
ATOM 12 O2' A A 304 12.385 148.360 44.550 1.00 63.37 O
ATOM 13 C1' A A 304 11.563 148.642 46.758 1.00 62.27 C
ATOM 14 N9 A A 304 11.176 147.854 47.931 1.00 61.45 N
ATOM 15 C8 A A 304 9.989 147.889 48.620 1.00 61.74 C
ATOM 16 N7 A A 304 9.958 147.093 49.662 1.00 61.44 N
ATOM 17 C5 A A 304 11.207 146.484 49.655 1.00 60.99 C
ATOM 18 C6 A A 304 11.808 145.530 50.506 1.00 60.51 C
ATOM 19 N6 A A 304 11.211 145.007 51.583 1.00 59.91 N
ATOM 20 N1 A A 304 13.065 145.129 50.209 1.00 59.37 N
ATOM 21 C2 A A 304 13.667 145.654 49.143 1.00 57.56 C
ATOM 22 N3 A A 304 13.214 146.556 48.280 1.00 58.39 N
ATOM 23 C4 A A 304 11.964 146.936 48.591 1.00 60.46 C
ATOM 24 P A A 305 8.601 148.168 42.798 1.00 60.12 P
ATOM 25 OP1 A A 305 8.548 148.678 41.410 1.00 59.04 O
ATOM 26 OP2 A A 305 7.402 148.295 43.669 1.00 60.17 O
ATOM 27 O5' A A 305 9.033 146.638 42.714 1.00 59.69 O
TER
ATOM 1 O3' G B 324 16.551 145.708 47.036 1.00 56.96 O
ATOM 2 P A B 325 17.353 144.404 47.535 1.00 55.77 P
ATOM 3 OP1 A B 325 17.784 144.720 48.917 1.00 57.58 O
ATOM 4 OP2 A B 325 18.367 143.963 46.530 1.00 54.19 O
ATOM 5 O5' A B 325 16.229 143.283 47.637 1.00 58.24 O
ATOM 6 C5' A B 325 16.016 142.332 46.578 1.00 56.72 C
ATOM 7 C4' A B 325 15.654 141.002 47.172 1.00 55.68 C
ATOM 8 O4' A B 325 14.629 141.208 48.181 1.00 54.40 O
ATOM 9 C3' A B 325 15.113 139.945 46.221 1.00 57.45 C
ATOM 10 O3' A B 325 15.516 138.679 46.725 1.00 60.68 O
ATOM 11 C2' A B 325 13.603 140.086 46.412 1.00 57.66 C
ATOM 12 O2' A B 325 12.877 138.908 46.125 1.00 60.07 O
ATOM 13 C1' A B 325 13.529 140.373 47.906 1.00 55.06 C
ATOM 14 N9 A B 325 12.318 141.048 48.359 1.00 54.17 N
ATOM 15 C8 A B 325 11.504 140.660 49.390 1.00 54.12 C
ATOM 16 N7 A B 325 10.503 141.475 49.610 1.00 54.12 N
ATOM 17 C5 A B 325 10.659 142.463 48.652 1.00 54.24 C
ATOM 18 C6 A B 325 9.919 143.620 48.361 1.00 53.37 C
ATOM 19 N6 A B 325 8.835 144.000 49.037 1.00 52.28 N
ATOM 20 N1 A B 325 10.339 144.388 47.337 1.00 55.52 N
ATOM 21 C2 A B 325 11.438 144.013 46.660 1.00 56.29 C
ATOM 22 N3 A B 325 12.221 142.951 46.842 1.00 55.18 N
ATOM 23 C4 A B 325 11.771 142.208 47.866 1.00 55.01 C
ATOM 24 P C B 326 16.689 137.856 46.005 1.00 61.69 P
ATOM 25 OP1 C B 326 17.433 137.152 47.082 1.00 63.77 O
ATOM 26 OP2 C B 326 17.426 138.743 45.071 1.00 63.63 O
ATOM 27 O5' C B 326 15.914 136.754 45.157 1.00 64.01 O
TER
ATOM 2 P A A 304 7.121 150.592 47.778 1.00 67.47 P
ATOM 3 OP1 A A 304 6.107 151.420 47.096 1.00 70.16 O
ATOM 4 OP2 A A 304 6.689 149.520 48.703 1.00 69.22 O
ATOM 5 O5' A A 304 8.046 149.961 46.655 1.00 66.81 O
ATOM 6 C5' A A 304 8.882 150.805 45.854 1.00 65.27 C
ATOM 7 C4' A A 304 10.181 150.107 45.571 1.00 63.45 C
ATOM 8 O4' A A 304 10.897 149.888 46.812 1.00 62.65 O
ATOM 9 C3' A A 304 10.001 148.727 44.972 1.00 61.88 C
ATOM 10 O3' A A 304 9.840 148.870 43.556 1.00 61.76 O
ATOM 11 C2' A A 304 11.293 148.024 45.381 1.00 62.20 C
ATOM 12 O2' A A 304 12.385 148.360 44.550 1.00 63.37 O
ATOM 13 C1' A A 304 11.563 148.642 46.758 1.00 62.27 C
ATOM 14 N9 A A 304 11.176 147.854 47.931 1.00 61.45 N
ATOM 15 C8 A A 304 9.989 147.889 48.620 1.00 61.74 C
ATOM 16 N7 A A 304 9.958 147.093 49.662 1.00 61.44 N
ATOM 17 C5 A A 304 11.207 146.484 49.655 1.00 60.99 C
ATOM 18 C6 A A 304 11.808 145.530 50.506 1.00 60.51 C
ATOM 19 N6 A A 304 11.211 145.007 51.583 1.00 59.91 N
ATOM 20 N1 A A 304 13.065 145.129 50.209 1.00 59.37 N
ATOM 21 C2 A A 304 13.667 145.654 49.143 1.00 57.56 C
ATOM 22 N3 A A 304 13.214 146.556 48.280 1.00 58.39 N
ATOM 23 C4 A A 304 11.964 146.936 48.591 1.00 60.46 C
ATOM 24 P A A 305 8.601 148.168 42.798 1.00 60.12 P
ATOM 25 OP1 A A 305 8.548 148.678 41.410 1.00 59.04 O
ATOM 26 OP2 A A 305 7.402 148.295 43.669 1.00 60.17 O
ATOM 27 O5' A A 305 9.033 146.638 42.714 1.00 59.69 O
TER
ATOM 1 O3' G B 324 16.551 145.708 47.036 1.00 56.96 O
ATOM 2 P A B 325 17.353 144.404 47.535 1.00 55.77 P
ATOM 3 OP1 A B 325 17.784 144.720 48.917 1.00 57.58 O
ATOM 4 OP2 A B 325 18.367 143.963 46.530 1.00 54.19 O
ATOM 5 O5' A B 325 16.229 143.283 47.637 1.00 58.24 O
ATOM 6 C5' A B 325 16.016 142.332 46.578 1.00 56.72 C
ATOM 7 C4' A B 325 15.654 141.002 47.172 1.00 55.68 C
ATOM 8 O4' A B 325 14.629 141.208 48.181 1.00 54.40 O
ATOM 9 C3' A B 325 15.113 139.945 46.221 1.00 57.45 C
ATOM 10 O3' A B 325 15.516 138.679 46.725 1.00 60.68 O
ATOM 11 C2' A B 325 13.603 140.086 46.412 1.00 57.66 C
ATOM 12 O2' A B 325 12.877 138.908 46.125 1.00 60.07 O
ATOM 13 C1' A B 325 13.529 140.373 47.906 1.00 55.06 C
ATOM 14 N9 A B 325 12.318 141.048 48.359 1.00 54.17 N
ATOM 15 C8 A B 325 11.504 140.660 49.390 1.00 54.12 C
ATOM 16 N7 A B 325 10.503 141.475 49.610 1.00 54.12 N
ATOM 17 C5 A B 325 10.659 142.463 48.652 1.00 54.24 C
ATOM 18 C6 A B 325 9.919 143.620 48.361 1.00 53.37 C
ATOM 19 N6 A B 325 8.835 144.000 49.037 1.00 52.28 N
ATOM 20 N1 A B 325 10.339 144.388 47.337 1.00 55.52 N
ATOM 21 C2 A B 325 11.438 144.013 46.660 1.00 56.29 C
ATOM 22 N3 A B 325 12.221 142.951 46.842 1.00 55.18 N
ATOM 23 C4 A B 325 11.771 142.208 47.866 1.00 55.01 C
ATOM 24 P C B 326 16.689 137.856 46.005 1.00 61.69 P
ATOM 25 OP1 C B 326 17.433 137.152 47.082 1.00 63.77 O
ATOM 26 OP2 C B 326 17.426 138.743 45.071 1.00 63.63 O
ATOM 27 O5' C B 326 15.914 136.754 45.157 1.00 64.01 O
TER
Atoms:
OP1: (6.107,151.420,47.096)
OP2: (6.689,149.520,48.703)
C3': (10.001,148.727,44.972)
C1': (11.563,148.642,46.758)
C5': (8.882,150.805,45.854)
O4': (10.897,149.888,46.812)
C8: (9.989,147.889,48.620)
O2': (12.385,148.360,44.550)
C6: (11.808,145.530,50.506)
C5: (11.207,146.484,49.655)
C4: (11.964,146.936,48.591)
P: (7.121,150.592,47.778)
C4': (10.181,150.107,45.571)
C2': (11.293,148.024,45.381)
C2: (13.667,145.654,49.143)
N1: (13.065,145.129,50.209)
N3: (13.214,146.556,48.280)
N6: (11.211,145.007,51.583)
N7: (9.958,147.093,49.662)
N9: (11.176,147.854,47.931)
O5': (8.046,149.961,46.655)
O3': (9.840,148.870,43.556)
OP2: (6.689,149.520,48.703)
C3': (10.001,148.727,44.972)
C1': (11.563,148.642,46.758)
C5': (8.882,150.805,45.854)
O4': (10.897,149.888,46.812)
C8: (9.989,147.889,48.620)
O2': (12.385,148.360,44.550)
C6: (11.808,145.530,50.506)
C5: (11.207,146.484,49.655)
C4: (11.964,146.936,48.591)
P: (7.121,150.592,47.778)
C4': (10.181,150.107,45.571)
C2': (11.293,148.024,45.381)
C2: (13.667,145.654,49.143)
N1: (13.065,145.129,50.209)
N3: (13.214,146.556,48.280)
N6: (11.211,145.007,51.583)
N7: (9.958,147.093,49.662)
N9: (11.176,147.854,47.931)
O5': (8.046,149.961,46.655)
O3': (9.840,148.870,43.556)
OP1: (17.784,144.720,48.917)
OP2: (18.367,143.963,46.530)
C3': (15.113,139.945,46.221)
C1': (13.529,140.373,47.906)
C5': (16.016,142.332,46.578)
O4': (14.629,141.208,48.181)
C8: (11.504,140.660,49.390)
O2': (12.877,138.908,46.125)
C6: (9.919,143.620,48.361)
C5: (10.659,142.463,48.652)
C4: (11.771,142.208,47.866)
P: (17.353,144.404,47.535)
C4': (15.654,141.002,47.172)
C2': (13.603,140.086,46.412)
C2: (11.438,144.013,46.660)
N1: (10.339,144.388,47.337)
N3: (12.221,142.951,46.842)
N6: (8.835,144.000,49.037)
N7: (10.503,141.475,49.610)
N9: (12.318,141.048,48.359)
O5': (16.229,143.283,47.637)
O3': (15.516,138.679,46.725)
OP2: (18.367,143.963,46.530)
C3': (15.113,139.945,46.221)
C1': (13.529,140.373,47.906)
C5': (16.016,142.332,46.578)
O4': (14.629,141.208,48.181)
C8: (11.504,140.660,49.390)
O2': (12.877,138.908,46.125)
C6: (9.919,143.620,48.361)
C5: (10.659,142.463,48.652)
C4: (11.771,142.208,47.866)
P: (17.353,144.404,47.535)
C4': (15.654,141.002,47.172)
C2': (13.603,140.086,46.412)
C2: (11.438,144.013,46.660)
N1: (10.339,144.388,47.337)
N3: (12.221,142.951,46.842)
N6: (8.835,144.000,49.037)
N7: (10.503,141.475,49.610)
N9: (12.318,141.048,48.359)
O5': (16.229,143.283,47.637)
O3': (15.516,138.679,46.725)
Image (generated by PyMOL):