Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0304:0325
Extra
PDB:
ATOM 1 O3' G A 303 8.138 151.478 48.284 1.00 60.90 O
ATOM 2 P A A 304 7.029 150.552 47.588 1.00 61.13 P
ATOM 3 OP1 A A 304 6.052 151.463 46.949 1.00 62.69 O
ATOM 4 OP2 A A 304 6.555 149.546 48.574 1.00 62.00 O
ATOM 5 O5' A A 304 7.834 149.821 46.432 1.00 59.34 O
ATOM 6 C5' A A 304 8.634 150.589 45.530 1.00 57.83 C
ATOM 7 C4' A A 304 9.975 149.938 45.345 1.00 55.66 C
ATOM 8 O4' A A 304 10.612 149.763 46.634 1.00 54.79 O
ATOM 9 C3' A A 304 9.907 148.543 44.766 1.00 54.37 C
ATOM 10 O3' A A 304 9.793 148.648 43.345 1.00 53.95 O
ATOM 11 C2' A A 304 11.225 147.932 45.239 1.00 54.19 C
ATOM 12 O2' A A 304 12.323 148.313 44.439 1.00 53.60 O
ATOM 13 C1' A A 304 11.397 148.586 46.615 1.00 53.63 C
ATOM 14 N9 A A 304 11.037 147.766 47.774 1.00 53.14 N
ATOM 15 C8 A A 304 9.881 147.813 48.515 1.00 53.16 C
ATOM 16 N7 A A 304 9.854 146.956 49.507 1.00 52.67 N
ATOM 17 C5 A A 304 11.073 146.299 49.414 1.00 52.41 C
ATOM 18 C6 A A 304 11.655 145.268 50.173 1.00 51.53 C
ATOM 19 N6 A A 304 11.061 144.692 51.219 1.00 52.29 N
ATOM 20 N1 A A 304 12.884 144.839 49.816 1.00 50.71 N
ATOM 21 C2 A A 304 13.476 145.408 48.767 1.00 50.11 C
ATOM 22 N3 A A 304 13.034 146.380 47.974 1.00 51.11 N
ATOM 23 C4 A A 304 11.812 146.787 48.353 1.00 52.38 C
ATOM 24 P A A 305 8.508 148.038 42.592 1.00 53.15 P
ATOM 25 OP1 A A 305 8.539 148.441 41.167 1.00 52.85 O
ATOM 26 OP2 A A 305 7.305 148.336 43.411 1.00 52.39 O
ATOM 27 O5' A A 305 8.777 146.477 42.613 1.00 51.62 O
TER
ATOM 1 O3' G B 324 16.425 145.479 46.809 1.00 47.65 O
ATOM 2 P A B 325 17.129 144.126 47.317 1.00 48.08 P
ATOM 3 OP1 A B 325 17.511 144.363 48.723 1.00 49.51 O
ATOM 4 OP2 A B 325 18.162 143.694 46.341 1.00 47.09 O
ATOM 5 O5' A B 325 15.954 143.055 47.328 1.00 49.39 O
ATOM 6 C5' A B 325 15.807 142.073 46.283 1.00 49.53 C
ATOM 7 C4' A B 325 15.514 140.728 46.896 1.00 50.68 C
ATOM 8 O4' A B 325 14.532 140.892 47.953 1.00 50.93 O
ATOM 9 C3' A B 325 14.970 139.646 45.973 1.00 52.09 C
ATOM 10 O3' A B 325 15.427 138.395 46.472 1.00 54.02 O
ATOM 11 C2' A B 325 13.461 139.757 46.199 1.00 52.62 C
ATOM 12 O2' A B 325 12.754 138.557 45.939 1.00 53.17 O
ATOM 13 C1' A B 325 13.409 140.076 47.692 1.00 50.77 C
ATOM 14 N9 A B 325 12.214 140.799 48.125 1.00 49.48 N
ATOM 15 C8 A B 325 11.348 140.438 49.126 1.00 49.69 C
ATOM 16 N7 A B 325 10.371 141.289 49.314 1.00 48.36 N
ATOM 17 C5 A B 325 10.603 142.276 48.369 1.00 48.45 C
ATOM 18 C6 A B 325 9.918 143.455 48.053 1.00 47.94 C
ATOM 19 N6 A B 325 8.813 143.860 48.681 1.00 48.30 N
ATOM 20 N1 A B 325 10.412 144.217 47.057 1.00 48.27 N
ATOM 21 C2 A B 325 11.520 143.809 46.427 1.00 47.39 C
ATOM 22 N3 A B 325 12.250 142.721 46.629 1.00 46.77 N
ATOM 23 C4 A B 325 11.733 141.987 47.626 1.00 48.61 C
ATOM 24 P C B 326 16.574 137.589 45.695 1.00 54.87 P
ATOM 25 OP1 C B 326 17.420 136.946 46.730 1.00 55.45 O
ATOM 26 OP2 C B 326 17.205 138.475 44.682 1.00 57.03 O
ATOM 27 O5' C B 326 15.778 136.448 44.923 1.00 55.24 O
TER
ATOM 2 P A A 304 7.029 150.552 47.588 1.00 61.13 P
ATOM 3 OP1 A A 304 6.052 151.463 46.949 1.00 62.69 O
ATOM 4 OP2 A A 304 6.555 149.546 48.574 1.00 62.00 O
ATOM 5 O5' A A 304 7.834 149.821 46.432 1.00 59.34 O
ATOM 6 C5' A A 304 8.634 150.589 45.530 1.00 57.83 C
ATOM 7 C4' A A 304 9.975 149.938 45.345 1.00 55.66 C
ATOM 8 O4' A A 304 10.612 149.763 46.634 1.00 54.79 O
ATOM 9 C3' A A 304 9.907 148.543 44.766 1.00 54.37 C
ATOM 10 O3' A A 304 9.793 148.648 43.345 1.00 53.95 O
ATOM 11 C2' A A 304 11.225 147.932 45.239 1.00 54.19 C
ATOM 12 O2' A A 304 12.323 148.313 44.439 1.00 53.60 O
ATOM 13 C1' A A 304 11.397 148.586 46.615 1.00 53.63 C
ATOM 14 N9 A A 304 11.037 147.766 47.774 1.00 53.14 N
ATOM 15 C8 A A 304 9.881 147.813 48.515 1.00 53.16 C
ATOM 16 N7 A A 304 9.854 146.956 49.507 1.00 52.67 N
ATOM 17 C5 A A 304 11.073 146.299 49.414 1.00 52.41 C
ATOM 18 C6 A A 304 11.655 145.268 50.173 1.00 51.53 C
ATOM 19 N6 A A 304 11.061 144.692 51.219 1.00 52.29 N
ATOM 20 N1 A A 304 12.884 144.839 49.816 1.00 50.71 N
ATOM 21 C2 A A 304 13.476 145.408 48.767 1.00 50.11 C
ATOM 22 N3 A A 304 13.034 146.380 47.974 1.00 51.11 N
ATOM 23 C4 A A 304 11.812 146.787 48.353 1.00 52.38 C
ATOM 24 P A A 305 8.508 148.038 42.592 1.00 53.15 P
ATOM 25 OP1 A A 305 8.539 148.441 41.167 1.00 52.85 O
ATOM 26 OP2 A A 305 7.305 148.336 43.411 1.00 52.39 O
ATOM 27 O5' A A 305 8.777 146.477 42.613 1.00 51.62 O
TER
ATOM 1 O3' G B 324 16.425 145.479 46.809 1.00 47.65 O
ATOM 2 P A B 325 17.129 144.126 47.317 1.00 48.08 P
ATOM 3 OP1 A B 325 17.511 144.363 48.723 1.00 49.51 O
ATOM 4 OP2 A B 325 18.162 143.694 46.341 1.00 47.09 O
ATOM 5 O5' A B 325 15.954 143.055 47.328 1.00 49.39 O
ATOM 6 C5' A B 325 15.807 142.073 46.283 1.00 49.53 C
ATOM 7 C4' A B 325 15.514 140.728 46.896 1.00 50.68 C
ATOM 8 O4' A B 325 14.532 140.892 47.953 1.00 50.93 O
ATOM 9 C3' A B 325 14.970 139.646 45.973 1.00 52.09 C
ATOM 10 O3' A B 325 15.427 138.395 46.472 1.00 54.02 O
ATOM 11 C2' A B 325 13.461 139.757 46.199 1.00 52.62 C
ATOM 12 O2' A B 325 12.754 138.557 45.939 1.00 53.17 O
ATOM 13 C1' A B 325 13.409 140.076 47.692 1.00 50.77 C
ATOM 14 N9 A B 325 12.214 140.799 48.125 1.00 49.48 N
ATOM 15 C8 A B 325 11.348 140.438 49.126 1.00 49.69 C
ATOM 16 N7 A B 325 10.371 141.289 49.314 1.00 48.36 N
ATOM 17 C5 A B 325 10.603 142.276 48.369 1.00 48.45 C
ATOM 18 C6 A B 325 9.918 143.455 48.053 1.00 47.94 C
ATOM 19 N6 A B 325 8.813 143.860 48.681 1.00 48.30 N
ATOM 20 N1 A B 325 10.412 144.217 47.057 1.00 48.27 N
ATOM 21 C2 A B 325 11.520 143.809 46.427 1.00 47.39 C
ATOM 22 N3 A B 325 12.250 142.721 46.629 1.00 46.77 N
ATOM 23 C4 A B 325 11.733 141.987 47.626 1.00 48.61 C
ATOM 24 P C B 326 16.574 137.589 45.695 1.00 54.87 P
ATOM 25 OP1 C B 326 17.420 136.946 46.730 1.00 55.45 O
ATOM 26 OP2 C B 326 17.205 138.475 44.682 1.00 57.03 O
ATOM 27 O5' C B 326 15.778 136.448 44.923 1.00 55.24 O
TER
Atoms:
OP1: (6.052,151.463,46.949)
OP2: (6.555,149.546,48.574)
C3': (9.907,148.543,44.766)
C1': (11.397,148.586,46.615)
C5': (8.634,150.589,45.530)
O4': (10.612,149.763,46.634)
C8: (9.881,147.813,48.515)
O2': (12.323,148.313,44.439)
C6: (11.655,145.268,50.173)
C5: (11.073,146.299,49.414)
C4: (11.812,146.787,48.353)
P: (7.029,150.552,47.588)
C4': (9.975,149.938,45.345)
C2': (11.225,147.932,45.239)
C2: (13.476,145.408,48.767)
N1: (12.884,144.839,49.816)
N3: (13.034,146.380,47.974)
N6: (11.061,144.692,51.219)
N7: (9.854,146.956,49.507)
N9: (11.037,147.766,47.774)
O5': (7.834,149.821,46.432)
O3': (9.793,148.648,43.345)
OP2: (6.555,149.546,48.574)
C3': (9.907,148.543,44.766)
C1': (11.397,148.586,46.615)
C5': (8.634,150.589,45.530)
O4': (10.612,149.763,46.634)
C8: (9.881,147.813,48.515)
O2': (12.323,148.313,44.439)
C6: (11.655,145.268,50.173)
C5: (11.073,146.299,49.414)
C4: (11.812,146.787,48.353)
P: (7.029,150.552,47.588)
C4': (9.975,149.938,45.345)
C2': (11.225,147.932,45.239)
C2: (13.476,145.408,48.767)
N1: (12.884,144.839,49.816)
N3: (13.034,146.380,47.974)
N6: (11.061,144.692,51.219)
N7: (9.854,146.956,49.507)
N9: (11.037,147.766,47.774)
O5': (7.834,149.821,46.432)
O3': (9.793,148.648,43.345)
OP1: (17.511,144.363,48.723)
OP2: (18.162,143.694,46.341)
C3': (14.970,139.646,45.973)
C1': (13.409,140.076,47.692)
C5': (15.807,142.073,46.283)
O4': (14.532,140.892,47.953)
C8: (11.348,140.438,49.126)
O2': (12.754,138.557,45.939)
C6: (9.918,143.455,48.053)
C5: (10.603,142.276,48.369)
C4: (11.733,141.987,47.626)
P: (17.129,144.126,47.317)
C4': (15.514,140.728,46.896)
C2': (13.461,139.757,46.199)
C2: (11.520,143.809,46.427)
N1: (10.412,144.217,47.057)
N3: (12.250,142.721,46.629)
N6: (8.813,143.860,48.681)
N7: (10.371,141.289,49.314)
N9: (12.214,140.799,48.125)
O5': (15.954,143.055,47.328)
O3': (15.427,138.395,46.472)
OP2: (18.162,143.694,46.341)
C3': (14.970,139.646,45.973)
C1': (13.409,140.076,47.692)
C5': (15.807,142.073,46.283)
O4': (14.532,140.892,47.953)
C8: (11.348,140.438,49.126)
O2': (12.754,138.557,45.939)
C6: (9.918,143.455,48.053)
C5: (10.603,142.276,48.369)
C4: (11.733,141.987,47.626)
P: (17.129,144.126,47.317)
C4': (15.514,140.728,46.896)
C2': (13.461,139.757,46.199)
C2: (11.520,143.809,46.427)
N1: (10.412,144.217,47.057)
N3: (12.250,142.721,46.629)
N6: (8.813,143.860,48.681)
N7: (10.371,141.289,49.314)
N9: (12.214,140.799,48.125)
O5': (15.954,143.055,47.328)
O3': (15.427,138.395,46.472)
Image (generated by PyMOL):