Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0423:0224
Extra
PDB:
ATOM 1 O3' U A 422 66.577 115.668 15.816 1.00 34.28 O
ATOM 2 P A A 423 65.619 115.492 17.083 1.00 36.61 P
ATOM 3 OP1 A A 423 65.936 116.583 18.036 1.00 37.08 O
ATOM 4 OP2 A A 423 65.705 114.085 17.532 1.00 36.83 O
ATOM 5 O5' A A 423 64.155 115.730 16.504 1.00 36.14 O
ATOM 6 C5' A A 423 63.824 116.913 15.757 1.00 36.62 C
ATOM 7 C4' A A 423 62.502 116.716 15.053 1.00 38.75 C
ATOM 8 O4' A A 423 62.630 115.641 14.090 1.00 38.80 O
ATOM 9 C3' A A 423 61.371 116.290 15.974 1.00 40.31 C
ATOM 10 O3' A A 423 60.717 117.438 16.500 1.00 42.43 O
ATOM 11 C2' A A 423 60.470 115.477 15.057 1.00 39.66 C
ATOM 12 O2' A A 423 59.645 116.292 14.257 1.00 41.03 O
ATOM 13 C1' A A 423 61.495 114.801 14.152 1.00 38.55 C
ATOM 14 N9 A A 423 61.952 113.483 14.585 1.00 38.80 N
ATOM 15 C8 A A 423 63.166 113.177 15.153 1.00 39.14 C
ATOM 16 N7 A A 423 63.347 111.896 15.354 1.00 39.61 N
ATOM 17 C5 A A 423 62.168 111.321 14.909 1.00 38.99 C
ATOM 18 C6 A A 423 61.747 109.992 14.831 1.00 38.58 C
ATOM 19 N6 A A 423 62.508 108.960 15.190 1.00 38.94 N
ATOM 20 N1 A A 423 60.508 109.754 14.353 1.00 39.03 N
ATOM 21 C2 A A 423 59.757 110.793 13.968 1.00 38.69 C
ATOM 22 N3 A A 423 60.049 112.090 13.975 1.00 39.33 N
ATOM 23 C4 A A 423 61.286 112.289 14.461 1.00 39.13 C
ATOM 24 P A A 424 59.847 117.316 17.838 1.00 43.08 P
ATOM 25 OP1 A A 424 58.993 118.529 17.906 1.00 43.66 O
ATOM 26 OP2 A A 424 60.771 117.005 18.959 1.00 43.22 O
ATOM 27 O5' A A 424 58.923 116.043 17.573 1.00 43.13 O
TER
ATOM 1 O3' C B 223 57.915 108.542 12.066 1.00 42.16 O
ATOM 2 P A B 224 58.122 107.976 10.583 1.00 41.16 P
ATOM 3 OP1 A B 224 58.059 109.144 9.667 1.00 42.15 O
ATOM 4 OP2 A B 224 57.199 106.828 10.380 1.00 41.22 O
ATOM 5 O5' A B 224 59.613 107.433 10.627 1.00 36.53 O
ATOM 6 C5' A B 224 60.094 106.498 9.667 1.00 37.31 C
ATOM 7 C4' A B 224 61.539 106.210 9.950 1.00 38.01 C
ATOM 8 O4' A B 224 62.274 107.454 9.868 1.00 39.72 O
ATOM 9 C3' A B 224 61.791 105.684 11.351 1.00 39.43 C
ATOM 10 O3' A B 224 63.014 104.960 11.363 1.00 42.34 O
ATOM 11 C2' A B 224 61.948 106.977 12.145 1.00 39.91 C
ATOM 12 O2' A B 224 62.652 106.829 13.363 1.00 39.48 O
ATOM 13 C1' A B 224 62.725 107.834 11.149 1.00 39.61 C
ATOM 14 N9 A B 224 62.509 109.273 11.277 1.00 39.86 N
ATOM 15 C8 A B 224 61.347 109.978 11.069 1.00 39.37 C
ATOM 16 N7 A B 224 61.476 111.270 11.238 1.00 37.99 N
ATOM 17 C5 A B 224 62.810 111.426 11.584 1.00 37.23 C
ATOM 18 C6 A B 224 63.571 112.553 11.890 1.00 36.86 C
ATOM 19 N6 A B 224 63.080 113.793 11.905 1.00 37.08 N
ATOM 20 N1 A B 224 64.874 112.367 12.187 1.00 37.62 N
ATOM 21 C2 A B 224 65.363 111.124 12.182 1.00 37.58 C
ATOM 22 N3 A B 224 64.746 109.984 11.917 1.00 38.23 N
ATOM 23 C4 A B 224 63.456 110.206 11.619 1.00 38.24 C
ATOM 24 P G B 225 63.190 103.646 10.453 1.00 43.65 P
ATOM 25 OP1 G B 225 61.959 103.480 9.629 1.00 41.17 O
ATOM 26 OP2 G B 225 63.653 102.519 11.318 1.00 44.04 O
ATOM 27 O5' G B 225 64.394 104.063 9.496 1.00 44.53 O
TER
ATOM 2 P A A 423 65.619 115.492 17.083 1.00 36.61 P
ATOM 3 OP1 A A 423 65.936 116.583 18.036 1.00 37.08 O
ATOM 4 OP2 A A 423 65.705 114.085 17.532 1.00 36.83 O
ATOM 5 O5' A A 423 64.155 115.730 16.504 1.00 36.14 O
ATOM 6 C5' A A 423 63.824 116.913 15.757 1.00 36.62 C
ATOM 7 C4' A A 423 62.502 116.716 15.053 1.00 38.75 C
ATOM 8 O4' A A 423 62.630 115.641 14.090 1.00 38.80 O
ATOM 9 C3' A A 423 61.371 116.290 15.974 1.00 40.31 C
ATOM 10 O3' A A 423 60.717 117.438 16.500 1.00 42.43 O
ATOM 11 C2' A A 423 60.470 115.477 15.057 1.00 39.66 C
ATOM 12 O2' A A 423 59.645 116.292 14.257 1.00 41.03 O
ATOM 13 C1' A A 423 61.495 114.801 14.152 1.00 38.55 C
ATOM 14 N9 A A 423 61.952 113.483 14.585 1.00 38.80 N
ATOM 15 C8 A A 423 63.166 113.177 15.153 1.00 39.14 C
ATOM 16 N7 A A 423 63.347 111.896 15.354 1.00 39.61 N
ATOM 17 C5 A A 423 62.168 111.321 14.909 1.00 38.99 C
ATOM 18 C6 A A 423 61.747 109.992 14.831 1.00 38.58 C
ATOM 19 N6 A A 423 62.508 108.960 15.190 1.00 38.94 N
ATOM 20 N1 A A 423 60.508 109.754 14.353 1.00 39.03 N
ATOM 21 C2 A A 423 59.757 110.793 13.968 1.00 38.69 C
ATOM 22 N3 A A 423 60.049 112.090 13.975 1.00 39.33 N
ATOM 23 C4 A A 423 61.286 112.289 14.461 1.00 39.13 C
ATOM 24 P A A 424 59.847 117.316 17.838 1.00 43.08 P
ATOM 25 OP1 A A 424 58.993 118.529 17.906 1.00 43.66 O
ATOM 26 OP2 A A 424 60.771 117.005 18.959 1.00 43.22 O
ATOM 27 O5' A A 424 58.923 116.043 17.573 1.00 43.13 O
TER
ATOM 1 O3' C B 223 57.915 108.542 12.066 1.00 42.16 O
ATOM 2 P A B 224 58.122 107.976 10.583 1.00 41.16 P
ATOM 3 OP1 A B 224 58.059 109.144 9.667 1.00 42.15 O
ATOM 4 OP2 A B 224 57.199 106.828 10.380 1.00 41.22 O
ATOM 5 O5' A B 224 59.613 107.433 10.627 1.00 36.53 O
ATOM 6 C5' A B 224 60.094 106.498 9.667 1.00 37.31 C
ATOM 7 C4' A B 224 61.539 106.210 9.950 1.00 38.01 C
ATOM 8 O4' A B 224 62.274 107.454 9.868 1.00 39.72 O
ATOM 9 C3' A B 224 61.791 105.684 11.351 1.00 39.43 C
ATOM 10 O3' A B 224 63.014 104.960 11.363 1.00 42.34 O
ATOM 11 C2' A B 224 61.948 106.977 12.145 1.00 39.91 C
ATOM 12 O2' A B 224 62.652 106.829 13.363 1.00 39.48 O
ATOM 13 C1' A B 224 62.725 107.834 11.149 1.00 39.61 C
ATOM 14 N9 A B 224 62.509 109.273 11.277 1.00 39.86 N
ATOM 15 C8 A B 224 61.347 109.978 11.069 1.00 39.37 C
ATOM 16 N7 A B 224 61.476 111.270 11.238 1.00 37.99 N
ATOM 17 C5 A B 224 62.810 111.426 11.584 1.00 37.23 C
ATOM 18 C6 A B 224 63.571 112.553 11.890 1.00 36.86 C
ATOM 19 N6 A B 224 63.080 113.793 11.905 1.00 37.08 N
ATOM 20 N1 A B 224 64.874 112.367 12.187 1.00 37.62 N
ATOM 21 C2 A B 224 65.363 111.124 12.182 1.00 37.58 C
ATOM 22 N3 A B 224 64.746 109.984 11.917 1.00 38.23 N
ATOM 23 C4 A B 224 63.456 110.206 11.619 1.00 38.24 C
ATOM 24 P G B 225 63.190 103.646 10.453 1.00 43.65 P
ATOM 25 OP1 G B 225 61.959 103.480 9.629 1.00 41.17 O
ATOM 26 OP2 G B 225 63.653 102.519 11.318 1.00 44.04 O
ATOM 27 O5' G B 225 64.394 104.063 9.496 1.00 44.53 O
TER
Atoms:
OP1: (65.936,116.583,18.036)
OP2: (65.705,114.085,17.532)
C3': (61.371,116.290,15.974)
C1': (61.495,114.801,14.152)
C5': (63.824,116.913,15.757)
O4': (62.630,115.641,14.090)
C8: (63.166,113.177,15.153)
O2': (59.645,116.292,14.257)
C6: (61.747,109.992,14.831)
C5: (62.168,111.321,14.909)
C4: (61.286,112.289,14.461)
P: (65.619,115.492,17.083)
C4': (62.502,116.716,15.053)
C2': (60.470,115.477,15.057)
C2: (59.757,110.793,13.968)
N1: (60.508,109.754,14.353)
N3: (60.049,112.090,13.975)
N6: (62.508,108.960,15.190)
N7: (63.347,111.896,15.354)
N9: (61.952,113.483,14.585)
O5': (64.155,115.730,16.504)
O3': (60.717,117.438,16.500)
OP2: (65.705,114.085,17.532)
C3': (61.371,116.290,15.974)
C1': (61.495,114.801,14.152)
C5': (63.824,116.913,15.757)
O4': (62.630,115.641,14.090)
C8: (63.166,113.177,15.153)
O2': (59.645,116.292,14.257)
C6: (61.747,109.992,14.831)
C5: (62.168,111.321,14.909)
C4: (61.286,112.289,14.461)
P: (65.619,115.492,17.083)
C4': (62.502,116.716,15.053)
C2': (60.470,115.477,15.057)
C2: (59.757,110.793,13.968)
N1: (60.508,109.754,14.353)
N3: (60.049,112.090,13.975)
N6: (62.508,108.960,15.190)
N7: (63.347,111.896,15.354)
N9: (61.952,113.483,14.585)
O5': (64.155,115.730,16.504)
O3': (60.717,117.438,16.500)
OP1: (58.059,109.144,9.667)
OP2: (57.199,106.828,10.380)
C3': (61.791,105.684,11.351)
C1': (62.725,107.834,11.149)
C5': (60.094,106.498,9.667)
O4': (62.274,107.454,9.868)
C8: (61.347,109.978,11.069)
O2': (62.652,106.829,13.363)
C6: (63.571,112.553,11.890)
C5: (62.810,111.426,11.584)
C4: (63.456,110.206,11.619)
P: (58.122,107.976,10.583)
C4': (61.539,106.210,9.950)
C2': (61.948,106.977,12.145)
C2: (65.363,111.124,12.182)
N1: (64.874,112.367,12.187)
N3: (64.746,109.984,11.917)
N6: (63.080,113.793,11.905)
N7: (61.476,111.270,11.238)
N9: (62.509,109.273,11.277)
O5': (59.613,107.433,10.627)
O3': (63.014,104.960,11.363)
OP2: (57.199,106.828,10.380)
C3': (61.791,105.684,11.351)
C1': (62.725,107.834,11.149)
C5': (60.094,106.498,9.667)
O4': (62.274,107.454,9.868)
C8: (61.347,109.978,11.069)
O2': (62.652,106.829,13.363)
C6: (63.571,112.553,11.890)
C5: (62.810,111.426,11.584)
C4: (63.456,110.206,11.619)
P: (58.122,107.976,10.583)
C4': (61.539,106.210,9.950)
C2': (61.948,106.977,12.145)
C2: (65.363,111.124,12.182)
N1: (64.874,112.367,12.187)
N3: (64.746,109.984,11.917)
N6: (63.080,113.793,11.905)
N7: (61.476,111.270,11.238)
N9: (62.509,109.273,11.277)
O5': (59.613,107.433,10.627)
O3': (63.014,104.960,11.363)
Image (generated by PyMOL):