ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2QWY:B12:B47

Extra

PDB:
ATOM 1 O3' U A 11 7.861 30.082 -0.345 1.00 62.32 O
ATOM 2 P A A 12 8.786 29.945 -1.642 1.00 64.19 P
ATOM 3 OP1 A A 12 8.514 31.129 -2.486 1.00 62.11 O
ATOM 4 OP2 A A 12 8.592 28.580 -2.199 1.00 64.56 O
ATOM 5 O5' A A 12 10.270 30.084 -1.086 1.00 64.30 O
ATOM 6 C5' A A 12 10.903 31.352 -1.037 1.00 66.56 C
ATOM 7 C4' A A 12 11.967 31.424 -2.091 1.00 68.08 C
ATOM 8 O4' A A 12 12.985 30.491 -1.693 1.00 67.73 O
ATOM 9 C3' A A 12 11.508 30.945 -3.462 1.00 69.63 C
ATOM 10 O3' A A 12 10.942 31.982 -4.285 1.00 70.47 O
ATOM 11 C2' A A 12 12.708 30.196 -4.054 1.00 70.12 C
ATOM 12 O2' A A 12 13.432 30.890 -5.056 1.00 72.73 O
ATOM 13 C1' A A 12 13.593 29.941 -2.834 1.00 69.20 C
ATOM 14 N9 A A 12 13.824 28.534 -2.557 1.00 68.20 N
ATOM 15 C8 A A 12 12.952 27.485 -2.631 1.00 68.29 C
ATOM 16 N7 A A 12 13.478 26.340 -2.274 1.00 68.10 N
ATOM 17 C5 A A 12 14.788 26.663 -1.952 1.00 67.89 C
ATOM 18 C6 A A 12 15.868 25.897 -1.495 1.00 67.62 C
ATOM 19 N6 A A 12 15.808 24.586 -1.284 1.00 68.78 N
ATOM 20 N1 A A 12 17.034 26.532 -1.260 1.00 67.62 N
ATOM 21 C2 A A 12 17.102 27.846 -1.484 1.00 67.81 C
ATOM 22 N3 A A 12 16.161 28.672 -1.919 1.00 67.53 N
ATOM 23 C4 A A 12 15.013 28.009 -2.132 1.00 68.22 C
ATOM 24 P A A 13 11.773 33.329 -4.649 1.00 69.36 P
ATOM 25 OP1 A A 13 13.241 33.164 -4.465 1.00 68.13 O
ATOM 26 OP2 A A 13 11.068 34.439 -3.965 1.00 67.30 O
ATOM 27 O5' A A 13 11.486 33.476 -6.204 1.00 67.59 O
TER

ATOM 1 O3' A B 46 21.008 29.282 0.681 1.00 76.68 O
ATOM 2 P A B 47 21.113 29.431 -0.913 1.00 78.64 P
ATOM 3 OP1 A B 47 22.305 30.276 -1.169 1.00 79.02 O
ATOM 4 OP2 A B 47 19.800 29.822 -1.487 1.00 77.28 O
ATOM 5 O5' A B 47 21.459 27.953 -1.387 1.00 80.68 O
ATOM 6 C5' A B 47 22.772 27.608 -1.819 1.00 81.26 C
ATOM 7 C4' A B 47 23.671 27.365 -0.630 1.00 81.73 C
ATOM 8 O4' A B 47 22.939 26.704 0.436 1.00 81.21 O
ATOM 9 C3' A B 47 24.827 26.415 -0.882 1.00 83.04 C
ATOM 10 O3' A B 47 25.890 27.072 -1.550 1.00 84.14 O
ATOM 11 C2' A B 47 25.209 26.036 0.536 1.00 83.45 C
ATOM 12 O2' A B 47 25.901 27.065 1.212 1.00 85.26 O
ATOM 13 C1' A B 47 23.827 25.861 1.159 1.00 82.59 C
ATOM 14 N9 A B 47 23.358 24.484 1.048 1.00 82.41 N
ATOM 15 C8 A B 47 22.140 24.039 0.613 1.00 83.41 C
ATOM 16 N7 A B 47 22.003 22.737 0.668 1.00 83.80 N
ATOM 17 C5 A B 47 23.219 22.295 1.164 1.00 83.22 C
ATOM 18 C6 A B 47 23.706 21.011 1.475 1.00 83.89 C
ATOM 19 N6 A B 47 22.992 19.890 1.329 1.00 83.78 N
ATOM 20 N1 A B 47 24.964 20.917 1.954 1.00 83.05 N
ATOM 21 C2 A B 47 25.670 22.041 2.111 1.00 82.79 C
ATOM 22 N3 A B 47 25.319 23.302 1.863 1.00 82.48 N
ATOM 23 C4 A B 47 24.067 23.360 1.389 1.00 82.27 C
ATOM 24 P A B 48 26.230 26.683 -3.069 1.00 85.50 P
ATOM 25 OP1 A B 48 27.452 27.452 -3.406 1.00 84.72 O
ATOM 26 OP2 A B 48 25.009 26.835 -3.911 1.00 84.17 O
ATOM 27 O5' A B 48 26.583 25.132 -2.986 1.00 85.53 O
TER

Atoms:
OP1: (8.514,31.129,-2.486)
OP2: (8.592,28.580,-2.199)
C3': (11.508,30.945,-3.462)
C1': (13.593,29.941,-2.834)
C5': (10.903,31.352,-1.037)
O4': (12.985,30.491,-1.693)
C8: (12.952,27.485,-2.631)
O2': (13.432,30.890,-5.056)
C6: (15.868,25.897,-1.495)
C5: (14.788,26.663,-1.952)
C4: (15.013,28.009,-2.132)
P: (8.786,29.945,-1.642)
C4': (11.967,31.424,-2.091)
C2': (12.708,30.196,-4.054)
C2: (17.102,27.846,-1.484)
N1: (17.034,26.532,-1.260)
N3: (16.161,28.672,-1.919)
N6: (15.808,24.586,-1.284)
N7: (13.478,26.340,-2.274)
N9: (13.824,28.534,-2.557)
O5': (10.270,30.084,-1.086)
O3': (10.942,31.982,-4.285)
OP1: (22.305,30.276,-1.169)
OP2: (19.800,29.822,-1.487)
C3': (24.827,26.415,-0.882)
C1': (23.827,25.861,1.159)
C5': (22.772,27.608,-1.819)
O4': (22.939,26.704,0.436)
C8: (22.140,24.039,0.613)
O2': (25.901,27.065,1.212)
C6: (23.706,21.011,1.475)
C5: (23.219,22.295,1.164)
C4: (24.067,23.360,1.389)
P: (21.113,29.431,-0.913)
C4': (23.671,27.365,-0.630)
C2': (25.209,26.036,0.536)
C2: (25.670,22.041,2.111)
N1: (24.964,20.917,1.954)
N3: (25.319,23.302,1.863)
N6: (22.992,19.890,1.329)
N7: (22.003,22.737,0.668)
N9: (23.358,24.484,1.048)
O5': (21.459,27.953,-1.387)
O3': (25.890,27.072,-1.550)
Image (generated by PyMOL):
PyMOL image
show in jmol