ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHZ:A1459:A1457

Extra

PDB:
ATOM 1 O3' C A1458 9.658 -1.045 -13.956 1.00194.79 O
ATOM 2 P A A1459 9.521 -2.598 -13.535 1.00197.08 P
ATOM 3 OP1 A A1459 10.211 -2.758 -12.228 1.00187.60 O
ATOM 4 OP2 A A1459 9.984 -3.411 -14.692 1.00186.18 O
ATOM 5 O5' A A1459 7.949 -2.776 -13.343 1.00184.78 O
ATOM 6 C5' A A1459 7.189 -3.598 -14.221 1.00177.01 C
ATOM 7 C4' A A1459 5.816 -3.019 -14.462 1.00176.36 C
ATOM 8 O4' A A1459 5.923 -1.857 -15.322 1.00177.81 O
ATOM 9 C3' A A1459 4.818 -3.924 -15.174 1.00171.41 C
ATOM 10 O3' A A1459 4.174 -4.831 -14.294 1.00172.88 O
ATOM 11 C2' A A1459 3.863 -2.927 -15.821 1.00170.88 C
ATOM 12 O2' A A1459 2.918 -2.449 -14.873 1.00170.96 O
ATOM 13 C1' A A1459 4.808 -1.783 -16.180 1.00173.35 C
ATOM 14 N9 A A1459 5.285 -1.879 -17.565 1.00169.20 N
ATOM 15 C8 A A1459 6.194 -2.763 -18.079 1.00170.04 C
ATOM 16 N7 A A1459 6.418 -2.589 -19.356 1.00170.72 N
ATOM 17 C5 A A1459 5.602 -1.521 -19.694 1.00171.85 C
ATOM 18 C6 A A1459 5.380 -0.850 -20.904 1.00174.04 C
ATOM 19 N6 A A1459 5.986 -1.170 -22.049 1.00172.86 N
ATOM 20 N1 A A1459 4.501 0.176 -20.895 1.00179.94 N
ATOM 21 C2 A A1459 3.896 0.497 -19.744 1.00180.99 C
ATOM 22 N3 A A1459 4.024 -0.060 -18.544 1.00176.47 N
ATOM 23 C4 A A1459 4.901 -1.072 -18.595 1.00171.51 C
ATOM 24 P A A1460 3.533 -6.200 -14.853 1.00172.87 P
ATOM 25 OP1 A A1460 2.840 -6.856 -13.711 1.00174.12 O
ATOM 26 OP2 A A1460 4.618 -6.937 -15.545 1.00170.80 O
ATOM 27 O5' A A1460 2.459 -5.687 -15.921 1.00147.08 O
TER

ATOM 1 O3' A B1456 2.896 3.704 -20.766 1.00191.39 O
ATOM 2 P A B1457 3.003 4.160 -19.223 1.00188.73 P
ATOM 3 OP1 A B1457 3.138 2.929 -18.411 1.00186.99 O
ATOM 4 OP2 A B1457 1.856 5.064 -18.957 1.00189.89 O
ATOM 5 O5' A B1457 4.368 4.984 -19.179 1.00191.19 O
ATOM 6 C5' A B1457 5.351 4.719 -18.180 1.00190.17 C
ATOM 7 C4' A B1457 6.280 3.614 -18.607 1.00187.90 C
ATOM 8 O4' A B1457 7.051 4.089 -19.739 1.00187.10 O
ATOM 9 C3' A B1457 7.281 3.150 -17.550 1.00191.71 C
ATOM 10 O3' A B1457 6.883 1.900 -16.977 1.00190.76 O
ATOM 11 C2' A B1457 8.598 2.964 -18.316 1.00192.35 C
ATOM 12 O2' A B1457 8.941 1.617 -18.572 1.00187.45 O
ATOM 13 C1' A B1457 8.414 3.737 -19.619 1.00190.60 C
ATOM 14 N9 A B1457 9.217 4.963 -19.643 1.00192.95 N
ATOM 15 C8 A B1457 8.851 6.278 -19.463 1.00188.83 C
ATOM 16 N7 A B1457 9.874 7.105 -19.488 1.00192.14 N
ATOM 17 C5 A B1457 10.988 6.282 -19.663 1.00194.53 C
ATOM 18 C6 A B1457 12.378 6.533 -19.770 1.00194.48 C
ATOM 19 N6 A B1457 12.938 7.751 -19.718 1.00192.56 N
ATOM 20 N1 A B1457 13.198 5.466 -19.938 1.00193.36 N
ATOM 21 C2 A B1457 12.662 4.238 -19.993 1.00189.78 C
ATOM 22 N3 A B1457 11.384 3.877 -19.907 1.00187.04 N
ATOM 23 C4 A B1457 10.591 4.956 -19.742 1.00191.94 C
ATOM 24 P C B1458 7.945 1.035 -16.110 1.00196.39 P
ATOM 25 OP1 C B1458 9.258 1.723 -16.206 1.00191.39 O
ATOM 26 OP2 C B1458 7.841 -0.367 -16.582 1.00191.93 O
ATOM 27 O5' C B1458 7.395 1.144 -14.615 1.00188.34 O
TER

Atoms:
OP1: (10.211,-2.758,-12.228)
OP2: (9.984,-3.411,-14.692)
C3': (4.818,-3.924,-15.174)
C1': (4.808,-1.783,-16.180)
C5': (7.189,-3.598,-14.221)
O4': (5.923,-1.857,-15.322)
C8: (6.194,-2.763,-18.079)
O2': (2.918,-2.449,-14.873)
C6: (5.380,-0.850,-20.904)
C5: (5.602,-1.521,-19.694)
C4: (4.901,-1.072,-18.595)
P: (9.521,-2.598,-13.535)
C4': (5.816,-3.019,-14.462)
C2': (3.863,-2.927,-15.821)
C2: (3.896,0.497,-19.744)
N1: (4.501,0.176,-20.895)
N3: (4.024,-0.060,-18.544)
N6: (5.986,-1.170,-22.049)
N7: (6.418,-2.589,-19.356)
N9: (5.285,-1.879,-17.565)
O5': (7.949,-2.776,-13.343)
O3': (4.174,-4.831,-14.294)
OP1: (3.138,2.929,-18.411)
OP2: (1.856,5.064,-18.957)
C3': (7.281,3.150,-17.550)
C1': (8.414,3.737,-19.619)
C5': (5.351,4.719,-18.180)
O4': (7.051,4.089,-19.739)
C8: (8.851,6.278,-19.463)
O2': (8.941,1.617,-18.572)
C6: (12.378,6.533,-19.770)
C5: (10.988,6.282,-19.663)
C4: (10.591,4.956,-19.742)
P: (3.003,4.160,-19.223)
C4': (6.280,3.614,-18.607)
C2': (8.598,2.964,-18.316)
C2: (12.662,4.238,-19.993)
N1: (13.198,5.466,-19.938)
N3: (11.384,3.877,-19.907)
N6: (12.938,7.751,-19.718)
N7: (9.874,7.105,-19.488)
N9: (9.217,4.963,-19.643)
O5': (4.368,4.984,-19.179)
O3': (6.883,1.900,-16.977)
Image (generated by PyMOL):
PyMOL image
show in jmol