Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A241:A244
Extra
PDB:
ATOM 1 O3' G A 240 -14.495 80.295 98.941 1.00 39.24 O
ATOM 2 P A A 241 -13.411 81.062 98.024 1.00 32.70 P
ATOM 3 OP1 A A 241 -14.145 82.176 97.362 1.00 32.70 O
ATOM 4 OP2 A A 241 -12.740 80.038 97.179 1.00 32.70 O
ATOM 5 O5' A A 241 -12.370 81.642 99.088 1.00 32.70 O
ATOM 6 C5' A A 241 -12.834 82.213 100.295 1.00 32.70 C
ATOM 7 C4' A A 241 -12.060 83.437 100.664 1.00 32.70 C
ATOM 8 O4' A A 241 -10.843 83.036 101.319 1.00 32.70 O
ATOM 9 C3' A A 241 -11.650 84.318 99.506 1.00 32.70 C
ATOM 10 O3' A A 241 -11.625 85.677 99.934 1.00 32.70 O
ATOM 11 C2' A A 241 -10.237 83.853 99.206 1.00 32.70 C
ATOM 12 O2' A A 241 -9.432 84.839 98.599 1.00 32.70 O
ATOM 13 C1' A A 241 -9.724 83.489 100.594 1.00 32.70 C
ATOM 14 N9 A A 241 -8.744 82.406 100.612 1.00 32.26 N
ATOM 15 C8 A A 241 -8.607 81.367 99.736 1.00 32.26 C
ATOM 16 N7 A A 241 -7.665 80.522 100.078 1.00 32.26 N
ATOM 17 C5 A A 241 -7.168 81.022 101.263 1.00 32.26 C
ATOM 18 C6 A A 241 -6.151 80.576 102.111 1.00 32.26 C
ATOM 19 N6 A A 241 -5.421 79.481 101.893 1.00 32.26 N
ATOM 20 N1 A A 241 -5.908 81.306 103.214 1.00 32.26 N
ATOM 21 C2 A A 241 -6.640 82.405 103.432 1.00 32.26 C
ATOM 22 N3 A A 241 -7.612 82.933 102.696 1.00 32.26 N
ATOM 23 C4 A A 241 -7.830 82.178 101.610 1.00 32.26 C
ATOM 24 P U A 242 -12.874 86.637 99.623 1.00 21.39 P
ATOM 25 OP1 U A 242 -13.728 85.948 98.618 1.00 21.39 O
ATOM 26 OP2 U A 242 -12.322 87.961 99.295 1.00 21.39 O
ATOM 27 O5' U A 242 -13.639 86.700 101.012 1.00 21.39 O
TER
ATOM 1 O3' U B 243 -9.180 85.752 106.293 1.00 42.87 O
ATOM 2 P A B 244 -7.902 86.335 105.471 1.00 38.42 P
ATOM 3 OP1 A B 244 -7.526 87.608 106.117 1.00 38.42 O
ATOM 4 OP2 A B 244 -8.271 86.344 104.032 1.00 38.42 O
ATOM 5 O5' A B 244 -6.756 85.263 105.720 1.00 38.42 O
ATOM 6 C5' A B 244 -5.937 85.336 106.875 1.00 38.42 C
ATOM 7 C4' A B 244 -4.484 85.632 106.545 1.00 38.42 C
ATOM 8 O4' A B 244 -3.893 84.515 105.837 1.00 38.42 O
ATOM 9 C3' A B 244 -4.208 86.878 105.697 1.00 38.42 C
ATOM 10 O3' A B 244 -3.126 87.610 106.271 1.00 38.42 O
ATOM 11 C2' A B 244 -3.758 86.307 104.349 1.00 38.42 C
ATOM 12 O2' A B 244 -2.841 87.119 103.646 1.00 38.42 O
ATOM 13 C1' A B 244 -3.120 84.991 104.763 1.00 38.42 C
ATOM 14 N9 A B 244 -3.141 83.973 103.722 1.00 38.06 N
ATOM 15 C8 A B 244 -4.223 83.695 102.935 1.00 38.06 C
ATOM 16 N7 A B 244 -4.026 82.730 102.085 1.00 38.06 N
ATOM 17 C5 A B 244 -2.724 82.357 102.345 1.00 38.06 C
ATOM 18 C6 A B 244 -1.942 81.377 101.752 1.00 38.06 C
ATOM 19 N6 A B 244 -2.456 80.627 100.775 1.00 38.06 N
ATOM 20 N1 A B 244 -0.664 81.222 102.199 1.00 38.06 N
ATOM 21 C2 A B 244 -0.235 82.018 103.190 1.00 38.06 C
ATOM 22 N3 A B 244 -0.899 82.984 103.835 1.00 38.06 N
ATOM 23 C4 A B 244 -2.151 83.102 103.353 1.00 38.06 C
ATOM 24 P G B 245 -3.255 88.258 107.738 1.00 47.26 P
ATOM 25 OP1 G B 245 -3.900 87.257 108.625 1.00 47.26 O
ATOM 26 OP2 G B 245 -3.911 89.578 107.579 1.00 47.26 O
ATOM 27 O5' G B 245 -1.723 88.446 108.141 1.00 47.26 O
TER
ATOM 2 P A A 241 -13.411 81.062 98.024 1.00 32.70 P
ATOM 3 OP1 A A 241 -14.145 82.176 97.362 1.00 32.70 O
ATOM 4 OP2 A A 241 -12.740 80.038 97.179 1.00 32.70 O
ATOM 5 O5' A A 241 -12.370 81.642 99.088 1.00 32.70 O
ATOM 6 C5' A A 241 -12.834 82.213 100.295 1.00 32.70 C
ATOM 7 C4' A A 241 -12.060 83.437 100.664 1.00 32.70 C
ATOM 8 O4' A A 241 -10.843 83.036 101.319 1.00 32.70 O
ATOM 9 C3' A A 241 -11.650 84.318 99.506 1.00 32.70 C
ATOM 10 O3' A A 241 -11.625 85.677 99.934 1.00 32.70 O
ATOM 11 C2' A A 241 -10.237 83.853 99.206 1.00 32.70 C
ATOM 12 O2' A A 241 -9.432 84.839 98.599 1.00 32.70 O
ATOM 13 C1' A A 241 -9.724 83.489 100.594 1.00 32.70 C
ATOM 14 N9 A A 241 -8.744 82.406 100.612 1.00 32.26 N
ATOM 15 C8 A A 241 -8.607 81.367 99.736 1.00 32.26 C
ATOM 16 N7 A A 241 -7.665 80.522 100.078 1.00 32.26 N
ATOM 17 C5 A A 241 -7.168 81.022 101.263 1.00 32.26 C
ATOM 18 C6 A A 241 -6.151 80.576 102.111 1.00 32.26 C
ATOM 19 N6 A A 241 -5.421 79.481 101.893 1.00 32.26 N
ATOM 20 N1 A A 241 -5.908 81.306 103.214 1.00 32.26 N
ATOM 21 C2 A A 241 -6.640 82.405 103.432 1.00 32.26 C
ATOM 22 N3 A A 241 -7.612 82.933 102.696 1.00 32.26 N
ATOM 23 C4 A A 241 -7.830 82.178 101.610 1.00 32.26 C
ATOM 24 P U A 242 -12.874 86.637 99.623 1.00 21.39 P
ATOM 25 OP1 U A 242 -13.728 85.948 98.618 1.00 21.39 O
ATOM 26 OP2 U A 242 -12.322 87.961 99.295 1.00 21.39 O
ATOM 27 O5' U A 242 -13.639 86.700 101.012 1.00 21.39 O
TER
ATOM 1 O3' U B 243 -9.180 85.752 106.293 1.00 42.87 O
ATOM 2 P A B 244 -7.902 86.335 105.471 1.00 38.42 P
ATOM 3 OP1 A B 244 -7.526 87.608 106.117 1.00 38.42 O
ATOM 4 OP2 A B 244 -8.271 86.344 104.032 1.00 38.42 O
ATOM 5 O5' A B 244 -6.756 85.263 105.720 1.00 38.42 O
ATOM 6 C5' A B 244 -5.937 85.336 106.875 1.00 38.42 C
ATOM 7 C4' A B 244 -4.484 85.632 106.545 1.00 38.42 C
ATOM 8 O4' A B 244 -3.893 84.515 105.837 1.00 38.42 O
ATOM 9 C3' A B 244 -4.208 86.878 105.697 1.00 38.42 C
ATOM 10 O3' A B 244 -3.126 87.610 106.271 1.00 38.42 O
ATOM 11 C2' A B 244 -3.758 86.307 104.349 1.00 38.42 C
ATOM 12 O2' A B 244 -2.841 87.119 103.646 1.00 38.42 O
ATOM 13 C1' A B 244 -3.120 84.991 104.763 1.00 38.42 C
ATOM 14 N9 A B 244 -3.141 83.973 103.722 1.00 38.06 N
ATOM 15 C8 A B 244 -4.223 83.695 102.935 1.00 38.06 C
ATOM 16 N7 A B 244 -4.026 82.730 102.085 1.00 38.06 N
ATOM 17 C5 A B 244 -2.724 82.357 102.345 1.00 38.06 C
ATOM 18 C6 A B 244 -1.942 81.377 101.752 1.00 38.06 C
ATOM 19 N6 A B 244 -2.456 80.627 100.775 1.00 38.06 N
ATOM 20 N1 A B 244 -0.664 81.222 102.199 1.00 38.06 N
ATOM 21 C2 A B 244 -0.235 82.018 103.190 1.00 38.06 C
ATOM 22 N3 A B 244 -0.899 82.984 103.835 1.00 38.06 N
ATOM 23 C4 A B 244 -2.151 83.102 103.353 1.00 38.06 C
ATOM 24 P G B 245 -3.255 88.258 107.738 1.00 47.26 P
ATOM 25 OP1 G B 245 -3.900 87.257 108.625 1.00 47.26 O
ATOM 26 OP2 G B 245 -3.911 89.578 107.579 1.00 47.26 O
ATOM 27 O5' G B 245 -1.723 88.446 108.141 1.00 47.26 O
TER
Atoms:
OP1: (-14.145,82.176,97.362)
OP2: (-12.740,80.038,97.179)
C3': (-11.650,84.318,99.506)
C1': (-9.724,83.489,100.594)
C5': (-12.834,82.213,100.295)
O4': (-10.843,83.036,101.319)
C8: (-8.607,81.367,99.736)
O2': (-9.432,84.839,98.599)
C6: (-6.151,80.576,102.111)
C5: (-7.168,81.022,101.263)
C4: (-7.830,82.178,101.610)
P: (-13.411,81.062,98.024)
C4': (-12.060,83.437,100.664)
C2': (-10.237,83.853,99.206)
C2: (-6.640,82.405,103.432)
N1: (-5.908,81.306,103.214)
N3: (-7.612,82.933,102.696)
N6: (-5.421,79.481,101.893)
N7: (-7.665,80.522,100.078)
N9: (-8.744,82.406,100.612)
O5': (-12.370,81.642,99.088)
O3': (-11.625,85.677,99.934)
OP2: (-12.740,80.038,97.179)
C3': (-11.650,84.318,99.506)
C1': (-9.724,83.489,100.594)
C5': (-12.834,82.213,100.295)
O4': (-10.843,83.036,101.319)
C8: (-8.607,81.367,99.736)
O2': (-9.432,84.839,98.599)
C6: (-6.151,80.576,102.111)
C5: (-7.168,81.022,101.263)
C4: (-7.830,82.178,101.610)
P: (-13.411,81.062,98.024)
C4': (-12.060,83.437,100.664)
C2': (-10.237,83.853,99.206)
C2: (-6.640,82.405,103.432)
N1: (-5.908,81.306,103.214)
N3: (-7.612,82.933,102.696)
N6: (-5.421,79.481,101.893)
N7: (-7.665,80.522,100.078)
N9: (-8.744,82.406,100.612)
O5': (-12.370,81.642,99.088)
O3': (-11.625,85.677,99.934)
OP1: (-7.526,87.608,106.117)
OP2: (-8.271,86.344,104.032)
C3': (-4.208,86.878,105.697)
C1': (-3.120,84.991,104.763)
C5': (-5.937,85.336,106.875)
O4': (-3.893,84.515,105.837)
C8: (-4.223,83.695,102.935)
O2': (-2.841,87.119,103.646)
C6: (-1.942,81.377,101.752)
C5: (-2.724,82.357,102.345)
C4: (-2.151,83.102,103.353)
P: (-7.902,86.335,105.471)
C4': (-4.484,85.632,106.545)
C2': (-3.758,86.307,104.349)
C2: (-0.235,82.018,103.190)
N1: (-0.664,81.222,102.199)
N3: (-0.899,82.984,103.835)
N6: (-2.456,80.627,100.775)
N7: (-4.026,82.730,102.085)
N9: (-3.141,83.973,103.722)
O5': (-6.756,85.263,105.720)
O3': (-3.126,87.610,106.271)
OP2: (-8.271,86.344,104.032)
C3': (-4.208,86.878,105.697)
C1': (-3.120,84.991,104.763)
C5': (-5.937,85.336,106.875)
O4': (-3.893,84.515,105.837)
C8: (-4.223,83.695,102.935)
O2': (-2.841,87.119,103.646)
C6: (-1.942,81.377,101.752)
C5: (-2.724,82.357,102.345)
C4: (-2.151,83.102,103.353)
P: (-7.902,86.335,105.471)
C4': (-4.484,85.632,106.545)
C2': (-3.758,86.307,104.349)
C2: (-0.235,82.018,103.190)
N1: (-0.664,81.222,102.199)
N3: (-0.899,82.984,103.835)
N6: (-2.456,80.627,100.775)
N7: (-4.026,82.730,102.085)
N9: (-3.141,83.973,103.722)
O5': (-6.756,85.263,105.720)
O3': (-3.126,87.610,106.271)
Image (generated by PyMOL):